KEGG   Mastomys coucha (southern multimammate mouse): 116074591
Entry
116074591         CDS       T07224                                 
Symbol
Mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcoc03400]
    116074591 (Mdc1)
DNA repair and recombination proteins [BR:mcoc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    116074591 (Mdc1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 116074591
NCBI-ProteinID: XP_031203116
LinkDB
Position
Unknown
AA seq 1752 aa
MENTQVIDWDAEKEEETELSSGSLGYSVEPIGRLRLFSGTHGPERDFPLYLGKNVVGRSP
DCSVALPFPSISKQHAVIEISAWNKAPVLQDCGSLNGTQIVKPPRVLPPGVSHRLRDQEL
ILFADFPCQYHRLDVPPPLVPRSLLTIEKTPRIRVGSQNSRVLLAEDSEEEGDFPSGRCV
TNGSRNTASPSATVVPESDEEVSSPAPSVPGPSSPFGLGSDTDEEQGQQPVEEESSLADS
NGAAGEAEQPEAKGMTAGIQAQPTEQKLEDTKVKKEAGSAGVLDGSVLERSPTLGEDGDT
EVDEEQQPSGFVDSDTDVEEERIPVTPPVVPMKKNQVLLGVGIEDPGAPGVAHLQDSPAG
SDTNVEEDKIALAVPLERNHTPMVLNSDTDEEEEEVSAALTLAHLKERGIALWRKDPGTE
EVKSQPQVLVERSQSASGRDSDTDVEEGSSAGKRGIVPDSPMDVDEALTVTQPESQPPSR
PNDVDEDMDMSSPGSHLAVNQASSAVVKNGAQVEEEVPGPSVTLGEKHQVPLEGAQPSEE
AWETAAQEDSSLPVAALRTSQQPIAEDARTECAAAISEQESALEGGAQSRSPAAPVEQVV
IYTETSGNLTLPQREGAQTSTGREREAQVGGTKSAKECCDEPEDLCLPATQCFVEGESQH
PDAVQSLEDEPTQVFPCILPQKPGPSHHSLPTPGADTLDVPWEVLATQPFCLKEQTETSE
PQLIDIHLEAHGSQLSLPREPGGHQHLVHTSPVHTELLRIEGREIQTVEKAMGIPKELAD
RMTPEREPLEREIRGRTANSEREDVTGEELTQGTEDREPKKMLARDSQRKEADEDPEGNR
ESLEVEMKMSKDSQERERRVEKPEPEKEQEAAGLEVTPDGGVAQEGSRDEKGQIASLTLK
PGVGVKDLEGLASAPVISGSQGDGGKGDPLSPGRQQRGRLSCQMTPAGKASQGDPGPPDL
HLFSPVPEASAQSLLTAQSQKQSNPQPLFSTSSESLHTKPSVRPRRSSRMTSSPHSSAAL
KPYTTCPTNQPTASRPISRSTRGRANRSSTRTPELIVPTDSELQPSTSTEQPVIPKLTSQ
VTEGRAHTSVEMPEPVLTGPEIQSPTSTEQSVTPYLKPRATRGRPSRSSNKTLGPLISTG
PELQPPTSIEQPVIPKPTSRVTRGKPRKSSVKTPESVVPTGSELQPLTSIEQPVIPKPRA
TRGRSSKSSIETPEPVVPTGPELQLLTSAEQPIAPNLTSQASRGRSSKSIRTPELVQSGP
EFHQSTSTEQPDTPGPSSQGRRRRSSVRTPEASVPTTPELQPFTSKKQPTPKPTAPVSRG
RTYKPSTEDSESVGPMAPDFEPPTSTDHLVTPKVTGQSSTLQSSPLNASPISTTPELKPP
VPTAQPVTLEPIPQTNHQRRRRATGKQGSHTVPIGHKSYSAPSEPEPQSSASQSSGASEA
GESITTTPEPAIPLMHNEAAGRSGPIPKPQPKSSQIRKKHSTTTDPPRQKRPRRQVPQKT
IVVKVEDPAETQVKEEPQEIAISTPGKRKRDHAEEETQGNPTRSRRTKPNQEAVTPKVLF
TGVMDSRGERAVLALGGSLASSVNEASHLVTDRIRRTVKFLCALGKGIPILSLNWLYQSR
KAGCFLPPDDYLVTDPEQEKNFSFSLRDSLSRAQEQRLLEDYEIHVTPGVQPPPPQMGEI
ITCCGGTFLPSMPHSYKLHRVIITCTEDLPLCAIPSRLGLPLLSPEFILTGVLKQEATPE
AFVLSNLEMLST
NT seq 5259 nt   +upstreamnt  +downstreamnt
atggaaaacacccaggtgattgactgggatgctgaaaaagaggaagagacagaactatcc
agtggatccttggggtatagtgtggaacctatagggcggctacgtctcttcagtggtact
catggaccagaaagagatttcccactctaccttggcaagaatgtagttggtcggagccca
gactgctctgtggccctgccttttccatccatctccaaacagcatgcagtaattgaaatc
tcagcttggaacaaagcccctgtcctccaggattgtgggagcctcaatggcactcaaatc
gtaaagcctcctagggtcctacctcctggagtgagccatcgtctgagggaccaggaatta
attctgtttgcagactttccctgccaataccatcgcctggatgtcccaccacccttggtc
cctcggagtcttctaactatagagaagacccccagaatacgggtaggatcccagaattcc
agagttttgttggctgaggattcagaggaagaaggggattttccttctggaaggtgtgtg
acaaatggatcaaggaatacagcatccccttcagcaacagtagttccagaaagtgatgaa
gaggtctcttctccggccccaagtgtccctgggccatcttcgccctttggtttgggcagt
gacacagatgaagaacaaggtcagcaaccagtagaagaggagtcctctttagctgacagc
aatggtgccgcaggggaggctgagcagcctgaagctaaaggaatgactgctggcatacag
gctcagcctactgaacaaaagttggaggacacaaaagtcaagaaggaggcaggcagtgca
ggggttctggatgggtcagttctggagaggagccccactcttggggaggacggtgacaca
gaagtggatgaagaacaacaaccctctggttttgtggacagtgatacagatgtggaagaa
gagaggatccctgtgactccccctgtagttcctatgaagaagaaccaagtgctacttgga
gttggtatagaggatcctggagcacctggtgtggcacatctgcaagatagcccagctggt
agtgacacaaatgtggaggaggacaagattgcactggctgtccctctagagagaaaccac
acacccatggtgctcaacagtgatacagacgaggaggaggaggaggtctcagcagcactt
accttggcccatctgaaagagagaggaattgctttgtggcgtaaagacccaggcacagaa
gaggtcaagtcccaaccacaggtccttgtagaacgaagccagagtgcctctgggagagac
agtgacacagatgtggaggagggatcctcagcgggaaagagagggattgtccctgacagc
cccatggatgtagatgaggctcttactgtcacacagccagagagccagcctcccagtagg
cctaatgatgtagatgaggacatggatatgagctcccctggcagccatctagcggtaaat
caggcctcctctgctgtggtaaagaatggagcacaagtggaggaggaagtcccagggcca
tctgttaccctgggggagaagcaccaggtgcctctagagggagcccagccttctgaggaa
gcttgggaaacagctgcacaggaagactcatccttaccagtggcagccttaagaacgagc
cagcagccaatagcagaagatgccaggacagagtgtgctgcagccatttctgagcaggaa
agtgctcttgaggggggtgcccaaagcaggtcacctgcagcaccagtggagcaagtggta
atatacacagaaacttcagggaatctcaccctgccacagagagagggagcccaaacctcc
acaggaagggagagagaagcacaagtgggcgggaccaagagtgccaaagagtgctgtgac
gaacctgaagatctgtgccttccagctacccagtgctttgtggaaggggagagccagcac
ccagatgctgtccagagtctggaagatgagcctacccaagtcttcccatgcattcttcca
caaaagcctggaccttcccatcacagccttccgactccaggtgcagataccttggatgtg
ccttgggaagtcttggctacacagccattctgtctaaaagaacagacagagacttctgag
ccccagctcattgacatccaccttgaagctcatggatctcaactgtctctacctagggaa
ccaggaggacaccaacatctggttcataccagcccagttcacacagagctgttgagaatt
gaaggcagagagatacagactgtggagaaagccatgggtataccaaaggaattggcagac
aggatgacccctgagagagagccattggagagggaaatcaggggaagaacagcaaacagt
gagagagaagacgtgacaggggaagagctaactcaggggacagaggacagagaaccaaaa
aagatgttagctagagacagtcagagaaaagaggctgacgaggatcctgaagggaatagg
gagagtttggaggtagaaatgaagatgtccaaagactcacaggagagagagagaagagtg
gagaaaccagaaccagagaaagaacaggaggcagctggtttagaagtgacccctgatgga
ggggtggcacaggaagggagccgtgatgagaaagggcaaattgctagtctaacactaaag
cctggagttggggtgaaggaccttgagggacttgcatcagccccagtaatctctgggagc
cagggagatggaggaaagggagaccctttgagccctgggaggcagcagagaggccgcttg
agttgccagatgacacctgctggaaaggcttcccagggtgatcccgggcctccagacctt
cacctgttttctccagtgcctgaagcatcagctcagagtctcctcaccgctcagagccaa
aagcagtctaaccctcagcctctgttttcaacctcttctgagagtcttcacacaaagcct
agtgtcaggccacggcggtcctccaggatgacctcctccccacattcctctgctgccctt
aagccttataccacttgccccacaaaccagcctactgcctctagaccaatatctcgatcc
actcggggaagggcaaataggtcctctaccaggaccccagaactgattgtccctacagac
tctgagctccagccttccacctccacagaacagcctgtcatcccaaaacttacatctcag
gtcactgagggcagggcacatacctctgttgagatgcctgaaccagttctcacaggtcct
gaaatccagtctcccacctccacagaacagtctgtcaccccatacctcaagcctcgggcc
actcggggcagaccaagtaggtcttccaacaagaccctaggaccacttatttctactggc
cctgaactccaaccacccacctccatagaacaacctgtcatacctaaacccacttctcgg
gtcacaaggggcaagccacgtaaatcttctgtcaagaccccagaatcagttgtccccact
ggctctgaactgcagcctctcacttccatagaacagcctgttatccctaaacctagggcc
actcgaggtagatcaagtaaatcatctatcgagaccccagaaccagttgtccccactggt
cctgaactgcagcttcttacctctgcagaacagcctatcgctcccaacctcacatctcag
gcctctcggggtaggtcaagtaagtccatcaggaccccggaactagtccaaagtggccca
gaattccatcagtccacctccacagaacagcctgatacccctgggccctcatctcagggc
aggagacgtaggtcgtctgtcaggactcctgaagcaagtgtccccacaacccctgaactc
cagcctttcacttccaaaaaacaacctacccccaagcccacagctccagtcagtcgggga
aggacatataaaccctccactgaagattctgaatcagttgggccaatggcccctgatttt
gagcctcccacctctacagaccatcttgtcacccctaaggtcacaggtcagagctcaaca
ctacagtcttcacccctaaatgcttcccccatttccactacccctgaacttaagcctcct
gtccccacagcccagcctgttaccctggagcccattccacaaaccaatcaccaaaggaga
cggagggctactgggaagcagggttcccacacagttcccattggtcataagtcttactct
gccccctctgaacctgagccccaatcttcagccagccaaagctcaggggcgtcagaagca
ggtgagtcaattacaaccactcccgagcctgccattcccctgatgcataacgaagcagct
gggagatcagggcccattcctaagccccagcctaagtcttctcaaatccgaaagaagcat
tctactaccacagatccaccccgtcagaaacgtccccgaagacaagtcccgcagaaaacc
atagttgtcaaggtagaagatcctgcagaaacacaagtgaaggaagagcctcaggagatt
gcaatttcaacaccaggcaagagaaagagggaccatgcagaagaagaaacccagggaaac
ccaactcgaagccggcgaactaaacctaatcaagaagcagtaacccccaaggtactgttc
acaggagtcatggattctcgtggagagcgtgcagtgctagctctgggaggtagtctggcc
agctcagtaaatgaggcctcccacttggttactgatcgcatccgcaggacagtcaagttc
ttgtgtgccctggggaagggaattcccatcctgtccctgaactggctgtatcagtcccga
aaggctggttgcttcttgccgcctgatgactacttagtgactgatcctgaacaagagaag
aactttagcttcagccttcgggattcccttagccgtgctcaggaacaaagactactggag
gactatgagattcatgtgacccctggagtgcagccacccccacctcagatgggagagatc
atcacttgctgtggaggcactttcctgcccagcatgccccattcctacaagcttcaccga
gttatcataacttgcactgaagacctacctctctgtgctattccatctcgcctggggctc
cccctcctttctcctgagttcatcctgactggagtgctaaagcaggaagccacaccagag
gcctttgtcctctccaatttggaaatgttgtctacctaa

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