Mastomys coucha (southern multimammate mouse): 116074597
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Entry
116074597 CDS
T07224
Symbol
Dhx16
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116074597 (Dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116074597 (Dhx16)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116074597 (Dhx16)
Spliceosome [BR:
mcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
116074597 (Dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
116074597 (Dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Motif
Other DBs
NCBI-GeneID:
116074597
NCBI-ProteinID:
XP_031203145
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MATPEELERWVQEELHSVLGLSEWYIAQFLIRTAQRCASTEEFVQHLRDTDTLDLGGPAR
DFAPRIWSKVPRKAVVEKPARVAEREARALLEKNCSYKLLEDSEGGEEAVGRDGSNLQKK
QKRRKHLRKKHQEEENEKEEEKEEEEESGKKTTGRSKSPAEEKPASEDEWERTECEHLQD
LEERDAFAEWVRQRDEDRTRNVLERPDKKAYEVAQKRLKMAEEDRKAMVPELPKKSHREY
LPKWEQEKLEDLEVELADKEVLFGDMELSHHEXRELKXQPWLRDLAPEYLRAADDQENLE
ATNQYHMPKDQKTGEGESFLLMGEPARAEDIIEEEXGAPGEEQRCWEEAQLVAVSLKFGA
XDAAAQEPKYQLVLEKLETIEFVHEAQLHGDKEPSSGPTLSVQAQQKESIQAVRRSLPVF
PFREELLLTAIANHQVLIIESEIGSGKTTQIPQYLFEEGYTKKGMKIAFTQRRRVAAMSV
AARVAGEMGVKLGDEVGYSIRFEDCTSERTVLCYMTDGMLLWEFLSEPDLASYSVVMVDE
AHERTLHTDILFGLIKDVARFRRELKVLVDSATLDTACFSAFFDDAPVFQIPXHPFPVDI
FYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACGMLQDHCCRLGSKILE
LLVLPIYANLPSDMEVSIFHPTPPGA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccggaggagctagagcggtgggtgcaggaggagctgcactcggttctgggg
ctgagcgagtggtacatcgcgcagttcctgattcgcactgcgcagcgctgcgcctccacc
gaggagtttgtgcagcacctgcgcgacaccgacaccctggacctcggcgggccggcgcgg
gacttcgcgccgaggatctggagcaaggtcccacggaaggctgtggtggaaaagccagct
cgggtagctgagcgagaggcccgagccctgttggagaagaactgttcttacaagttgttg
gaagacagcgagggtggcgaggaggcagtgggcagggacgggagcaacctccagaagaag
cagaagagacggaaacacctccggaagaaacaccaggaggaggaaaatgagaaggaggag
gagaaggaggaggaggaagagtcaggcaagaagacgacggggaggagtaaatcacccgcg
gaggagaagccagcctcagaggatgagtgggagaggacggagtgtgagcatctccaggac
ttggaggaacgggatgcctttgcagagtgggttcggcaacgcgacgaggaccggacccgg
aatgtcctggaacggccagataagaaggcttatgaagtggctcagaagcgactcaagatg
gctgaggaagaccggaaagccatggtccctgagctccctaagaagtctcatcgggaatac
ctgccaaagtgggagcaggaaaagctggaggacctggaggtggaactggctgacaaggag
gtcctgtttggggacatggagctgagccatcacgagtgaagagagctcaagtaacagcca
tggctgcgggacctggctccggagtacctgagggcagcggacgatcaggagaacctggag
gccactaatcaataccacatgcccaaagaccagaagacaggtgagggggaatcctttctg
ctcatgggtgagccagcacgagctgaggacatcatcgaagaggaatagggtgctccagga
gaggagcagcggtgctgggaggaggcccagctggttgctgtgtcccttaagtttggggcc
tgagatgctgctgcacaggagcccaagtaccagctggtgctggagaagctggagaccatc
gagtttgtccatgaggctcagctccatggtgacaaggagccatcgtcaggcccaactctg
tcagtccaggcccagcagaaggagtccatccaggctgtgcgccgcagcctgccagtgttc
cccttccgagaggagctcctcctgaccgccattgccaaccaccaggtcctcatcatcgaa
agtgagattggctctgggaagactacacagatcccacagtacctctttgaggagggttac
acaaagaagggtatgaagattgctttcacccagcgccggagagtggcagccatgagtgta
gcagcccgagtggccggggagatgggtgtgaagcttggggatgaggtgggctacagcatc
cggtttgaggattgcacatcggagcgaactgttctctgctacatgacagacggaatgctt
ctctgggagttcctctctgagcctgaccttgcaagttacagtgtggtgatggtggatgaa
gctcatgagcggaccttgcacacagacattctctttggattgatcaaagatgttgctaga
ttccgacgggagctcaaggtcctggtggattcagccacactggatactgcctgtttttct
gccttctttgatgacgcccctgtcttccaaattccctgacacccgtttccagttgacatc
ttctataccaaggccccagaggctgactatctggaagcctgtgttgtgtcagtgctgcag
atccatgtgactcagccccctggggatatactggtgttcctgacaggacaggaggagatt
gaggctgcctgtgggatgctccaggaccactgctgcagactgggctccaagatcctggag
ctcctggtgctgcccatttatgccaacctgccctcagacatggaggttagcatcttccat
cccacaccccctggggcctga
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