Mastomys coucha (southern multimammate mouse): 116074614
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Entry
116074614 CDS
T07224
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116074614
Membrane trafficking [BR:
mcoc04131
]
Protein recycling
Others
EARP complex
116074614
Endosome - Golgi transport
Tethering complex
GARP complex
116074614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec3_C-term
COG6_N
DUF3440
DUF1664
Motif
Other DBs
NCBI-GeneID:
116074614
NCBI-ProteinID:
XP_031203173
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MNSSWMKWMVSGCGLRHYSKQVELELQQIEQKSIRDYIQESENIGSLHNQITACDTFLER
MEQMLGAFQSDLSSISSEIRALQEQSGAMNIRLRNPQAVRWKLGEHVDGLVVPSALVTAI
LEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQK
IYSFRKPMTNYQIPQTALMKYRFFYQFLLGNERTXKEIRDEYVETLSKIYLSYYRSYVGL
LMKVQYEEVAEKGYLMGVEDPAKKGFFSKPSLRSRNTIFILGTRGAVISPAELEAPILVP
HTAQRGEQRYPFEALFRSQHYAPLDNSCREYVFICEFFIVSGPAAHDLFHAVMDHTLSMT
LKHLESYLAACYDTIAVFLCIHIVLRFCNIAAKRDVPALDRYWEQVLALLWPRFELILEM
NVQSVRSTDPQRLGXLDTRPHYITYHYAEFSSALVSINQTIPNEYMLQLLGQIQVEVENF
VLRVAAEFSSRKEQLVFLINNYDMMLSVLMEQAADDSKEVESFQQLLNAWTQEFIEELLS
PPFGGLVTFVKEAEALIERGQAEQLRGKEARVTQLIHGFGSSWKASMESLSQDVMRSFTN
FRNGTSIIQEALTQLIQLYHCFHGVLFQPQLRALQARAKLINIHHLMVELKKHKPNF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatcttggatgaagtggatggtaagtgggtgtggtctcagacactattcaaag
caggtggaactggagctgcagcagattgagcagaaatcaatccgggactatatccaagag
agcgaaaacatagggtctctgcacaatcagatcacagcctgtgacacattcttggagcgc
atggagcagatgctgggagcttttcagagcgacctcagctccatcagctctgagatccgg
gccctgcaggagcagtcaggggccatgaatatccgacttcgtaacccacaagcagttcgg
tggaagcttggggaacacgtcgatggactggtggtgccctctgctctggtcacagcaatt
ctggaagctcctgtgaccgagcccaggttcctggagcagctgcaggagctggatgccaag
gcagcagcagtcagagagcaggaggctagaggcaccgctgcctgtgctgatgtcagaggt
gtgctcgaccgcctccgcgtcaaggcagtgacgaagatccgcgagttcattctccagaag
atttactcgttcagaaagccgatgaccaactatcagatcccccagacggccctgatgaag
tacaggtttttctatcagttcctgctgggcaatgagcgcactnacaaggagatcagggat
gagtacgtggagacgctgagcaagatctacctgtcctactaccgctcttatgtgggcctg
ctcatgaaagtgcagtatgaggaagttgctgagaaagggtatctaatgggtgtagaagac
ccagcaaagaaaggcttcttctcaaagccgtccctccgaagcaggaacaccatctttatc
ctgggcacccgtggtgctgtcatctcaccggccgaactcgaggcccccatcctggtgccc
cacactgcccagcgtggagagcagaggtatccgtttgaagcgctcttccgcagccagcac
tatgcccccctagacaattcttgccgtgaatatgttttcatctgtgaatttttcatcgtg
tctggcccggctgcacatgacctgttccacgctgttatggaccacacgctctccatgacg
ctgaaacacctggagtcctacctggccgcctgctacgacaccattgctgttttcctctgt
atccacattgttctccggttctgcaacattgcagcaaagagggacgtccctgccctggac
aggtactgggagcaggtgcttgccttgctgtggcctcggtttgagctgatcctggagatg
aatgtccagagtgtccgcagcactgatccccagcgccttgggtgactggacactcggccc
cactatatcacataccactatgctgagttctcctctgcacttgtcagcatcaaccagacc
atccccaatgaatacatgctgcagctgctgggacagatccaggtggaggtggagaatttt
gtcctccgagtggctgcggagttctcctccaggaaagagcagcttgtgtttctgatcaac
aactatgacatgatgctcagtgtgctgatggagcaggctgctgatgacagcaaagaggtg
gagagtttccagcagctgctcaatgcttggacacaggagttcattgaggagttgctgtct
cccccctttgggggtctggtgacattcgtgaaggaggctgaggccttgattgagcgtggg
caggccgagcagctccgagggaaggaagcccgagtcactcagctgatccatggctttggt
agttcctggaaggcgtccatggagtccctgagtcaggatgtaatgcggagttttaccaac
tttcgaaatggaaccagcatcatccaggaggcgctgacccagctgatccagctgtaccat
tgcttccatggggtgctgttccagccccagctccgagcgctccaggccagggccaagctc
atcaacatccatcacctcatggtggagctgaagaaacacaagccgaacttctga
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