Mastomys coucha (southern multimammate mouse): 116074778
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Entry
116074778 CDS
T07224
Symbol
Lta
Name
(RefSeq) lymphotoxin-alpha
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04060
Cytokine-cytokine receptor interaction
mcoc04061
Viral protein interaction with cytokine and cytokine receptor
mcoc04064
NF-kappa B signaling pathway
mcoc04668
TNF signaling pathway
mcoc04940
Type I diabetes mellitus
mcoc05166
Human T-cell leukemia virus 1 infection
mcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
116074778 (Lta)
04668 TNF signaling pathway
116074778 (Lta)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116074778 (Lta)
04061 Viral protein interaction with cytokine and cytokine receptor
116074778 (Lta)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
116074778 (Lta)
05168 Herpes simplex virus 1 infection
116074778 (Lta)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
116074778 (Lta)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
mcoc04052
]
116074778 (Lta)
Cytokines and neuropeptides [BR:
mcoc04052
]
Cytokines
Tumor necrosis fators
116074778 (Lta)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
116074778
NCBI-ProteinID:
XP_031203436
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MTPHGHLHLLRVLGAPPVFLLGLLLALPLGAQGLSGVRFSAARTAHQPPQKHLTHGILKP
AAHLVGYPSKQNSLLWRANTDRAFLRHGFSLSNNSLLIPTTGLYFVYSQVVFSGESCSSR
AVPTPIYLAHEVQLFSSQYPFHVPLLSAQKSVYPGLQGPWVRSMYQGAVFLLSKGDQLST
HTDGISHLHFSPSSVFFGAFAL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacacggacatctccacctcttgagggtgcttggtgcccctcctgtcttcctc
ctggggctgctgctggccctgcctctaggggcccagggactctctggagttcgcttctcc
gctgccaggacagctcatcagcccccacagaagcatttgacacatggcatcctgaaacct
gctgcacaccttgttgggtaccccagcaaacagaactcactgctctggagagcaaacacg
gatcgcgcctttctccgacatggcttctctttgagcaacaactccctcctgatccccacc
actggcctctactttgtctattcccaggtggttttctctggagaaagctgctcctccagg
gccgttcctactcccatctacctggcccatgaggtccagctgttttcctcccaatacccc
ttccacgtgcctctcctcagtgcgcagaagtccgtgtatcccgggctacaaggaccgtgg
gtacgctcaatgtaccagggggctgtgttcctgctcagtaagggagaccagctatccacc
cacaccgatggcatctcccatctacacttcagccccagcagtgtattctttggagctttt
gctctgtag
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