Mastomys coucha (southern multimammate mouse): 116074840
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Entry
116074840 CDS
T07224
Symbol
Tapbp
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04612
Antigen processing and presentation
mcoc05163
Human cytomegalovirus infection
mcoc05168
Herpes simplex virus 1 infection
mcoc05169
Epstein-Barr virus infection
mcoc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
116074840 (Tapbp)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116074840 (Tapbp)
05168 Herpes simplex virus 1 infection
116074840 (Tapbp)
05163 Human cytomegalovirus infection
116074840 (Tapbp)
05169 Epstein-Barr virus infection
116074840 (Tapbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
ig
PH_PHS1
Med5
Motif
Other DBs
NCBI-GeneID:
116074840
NCBI-ProteinID:
XP_031203588
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MKPLLPLVAVALGLATVVSAGPEAIECWFVEDAGGGSLSKKPATLLLRHGPRGPPPRADV
DPKLYFKVDDPAGMLLAAFRRYPAGASVPHCEISRFIPFPASAKWTRSLIPQPNCPRALD
GDWLLASVSSTVFSLSCLLRPQPEPQREPVSITMATVVLTVLTQNPAPRIQLGKDAVLDL
RFAYAPTDLRFADTPTALKDAPSVDAGPPPFGLEWRRQHRGKGHLLLAATPGLVERMPPA
QEQATAFAAWDDNEPWGPWTGNGTFWLPAVKPSQEGVYLATVHLPYLQGQVSLKLTVHKP
PRVSLTPAPVVWAAPGEAPPELLCLASHFYPVEGLKVEWEVRGGPEGSSRTAEGKTWLST
IRHHSDGSVSQAGHLQPPPVSAKQHGVRYACRVHHPSLPASGRSAVVTLEVAGFSGPSME
DGIGLFLSAFFLLGLIRVLGWLAAHLTIPEVSKEKATAASLTIPRYSKKSQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctctgctcccgctcgtcgccgtggcactgggcctggcgaccgtcgtctcggct
ggaccagaggcgatcgagtgctggttcgtggaggatgcaggtggaggtagcctgtccaag
aaacctgccacattgctactgcgccacggacccaggggaccgccgccccgggcagatgtt
gaccctaagctatacttcaaggttgatgacccggcgggcatgctcctggccgccttcagg
cggtaccccgcaggcgcctccgtcccccactgcgagataagtcgcttcatcccgttcccc
gcctcggcgaagtggactagaagtctgattccgcagccgaactgcccgcgggccctggac
ggggattggctgctggccagcgtatccagcacggtcttcagcctctcctgcctgctgcga
ccacagccggagcctcagcgggagccggtctccatcaccatggcaacagtggtgctgacc
gtcctcacccagaaccccgcccctcgaatccagctgggaaaggatgcagtgctggacctg
cgcttcgcctacgcgcccacggacctgcgcttcgccgacacgcccaccgccctgaaagat
gcgccctctgtggacgcaggccctcctccctttgggctggagtggcgacgccagcacagg
ggaaagggtcacctgctgctcgctgccacccctgggctggtcgagagaatgccaccagcc
caggaacaggctacggcatttgcagcttgggatgacaatgagccctggggcccgtggact
gggaatgggaccttctggctgccagcggtgaagccttctcaggagggtgtctacctggct
actgtacacctgccctacctgcaaggacaggtctccctgaagctgactgtgcacaagcca
cccagagtgtctctaacaccagcacctgttgtatgggctgccccaggagaggcgccccca
gaattgctctgtcttgcgtcccacttctaccctgtggagggcctgaaggtggaatgggaa
gtgaggggcggcccagaaggaagttctagaacggctgaggggaagacgtggctctccacc
atccgccaccattctgatggctctgtcagccaggctgggcacctgcagccaccgccagtc
tctgccaagcaacacggagttcgctatgcctgtcgggtgcaccaccctagcctgccagca
tcagggcgcagcgctgtcgtcaccctagaggtggcaggcttctccgggccctccatggag
gacggcatcggcctgttcctgtctgcttttttccttctgggcctcatcagggtgctaggc
tggctggctgcccacctcaccattcctgaagtctcaaaggagaaggccacagccgccagc
ctgaccattcccagatactcaaagaagtcacagtaa
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