Mastomys coucha (southern multimammate mouse): 116075526
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Entry
116075526 CDS
T07224
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03250
Viral life cycle - HIV-1
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116075526
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116075526
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116075526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116075526
03110 Chaperones and folding catalysts [BR:
mcoc03110
]
116075526
04121 Ubiquitin system [BR:
mcoc04121
]
116075526
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116075526
Chaperones and folding catalysts [BR:
mcoc03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
116075526
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
116075526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
zf-RanBP
IR1-M
Pro_isomerase
WH1
TPR_1
TPR_2
TPR_14
TPR_16
TPR_8
VID27_PH
TPR_11
Motif
Other DBs
NCBI-GeneID:
116075526
NCBI-ProteinID:
XP_031204630
LinkDB
All DBs
Position
Unknown
AA seq
3080 aa
AA seq
DB search
MRRSKAEVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDP
KAHRFLGLLYEVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER
AAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELYARPDDVHVNIRLVELYRSNKR
LKDAVAHCHEADRNTALRSSLEWNSCVVQTLKEYLESLQCLDSDKSTWRATNKDLLLAYA
NLMLLTLSTRDVQESRELLESFDSALQSVKSSVGGNDELSAAFLEAKAHFYMHVGSLLLK
MGQQSDIQWRALSELAALCYLVAFQVPRPKVKLIKGEAGQNLLETMAHDRLSQSGHMLLN
LSRGKQDFLKEVVESFANKSGQSALCDALLSSQSSKERSFLGSDDIGNLDGQVPDPDDLA
RYDTGAVRAHNGSLQHLTWLGLQWNSLPTLPAIRKWLKQLFHHLPQETSRLETNAPESIC
ILDLEVFLLGVIYTSHLQLKEKCNSHHTSYQPLCLPLPVCRQLCTERQKTWWDAVCTLIH
RKALPGTSAKLRLLVQREINSLRGQEKHGLQPALLVHWAQSLQKTGSSLNSFYDQREYIG
RSVHYWRKVLPLLKMIRKKNSIPEPIDPLFKHFHSVDIQASEIGEYEEDAHITFAILDAV
NGNIEDAMTAFESIKNVVSYWNLALIFHRKAEDIENDALSPEDQEECKNYLRKTRDYLIK
ILDDSDSNISVVQKLPVPLESVKEMLNSVMQELEDYSEGGPLYKNGCLRSADADLKHSTP
SPTKYSLSPSKSYKYSPKTPPRWAEDQNSLLKMICQQVEAIKKEMQELKLNSNNSASPHR
WPTEHYGQDPAPDGYQGSQTYHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKG
PVYGMNRLPPQQHIYAYSQQMHTPPVQSSSACMFSQEMYGPPLRFESPATGILSPRGDDY
FNYNVQQTSTNPPLPEPGYFTKPPLVAHAPRSAESKVIEFGKSNFVQPMQGEVIRPPLTT
PAHTAQPTPFKFNSNFKSNDGDFTFSSPQVVTQPPSTAYSNSESLLGLLTSDKPLQGDGY
SGLKPIAGQASGSRNTFSFGSKNTLTENMGPNQQKNFGFRRSDDMFTFHGPGKSMFTTPA
SELANKSHETDGGSAHGDEEDDGPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDG
ESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVW
HALDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQNILKAVGTNASTAPNHTPRIVKEP
ATVGSKDICKSDGGNLNFEFQIVKKEGPSWNCNSCSFKNAATAKKCVSCQNTNPTNNKEL
LVENGFAPKTGPENAQDRFTLMTSNKEGHWDCSVCLVRNEPTASRCIACQNTKSANKNGS
SFVQTSFKFGQGDLPKSVDSDFRSVFSKKEGQWECSQCLVGNERSSTKCVACQTPGKQAK
KWDCSSCSTRNEANAVKCVACHNPVKPSSSAALPSFKFGTSEMSKPSRSGFEGMFAKKEG
QWDCTMCFIRNEASATQCIACQNPNKQNHPTSSVSAPASSETSKSPKSGFEGLFTKKEGE
WECAVCSLQNESSSLKCVACDASKPTHKPNVDAPSAFTVGSKSQLNEPAGSQVGTEFKSS
FPEKNFKVGISEQKFKFGHVDQEKAPSFAFQSGSNTEFKSIKDGFSFCIPVSADGFKFGI
QEKGNQEKKSEKPLENDPSFQAHDISGQKNGSGVIFGQTTSTFTFADLAKSTSGEGFQFG
KKDPNFKGFSGAGEKLFSSQSGKVAEKANTSSDLEKDDDAYKTEDSDDIHFEPVVQMPEK
VELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLK
VCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEEC
QRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFKTFLTNDQVKVTDEENTSSGAD
ASSTSDTTVKQNPDTTGPALEWDNYDLREDALDDSVSSSSVHASPLASSPVRKNLFRFGE
STTGFNFSFKSALSPSKSPAKLNQSGTSVGTDEESDVTQEEERDGQYFEPVVPLPDLVEV
SSGEENEQVVFSHRAKLYRYDKEVGQWKERGIGDIKILQNYDNKQVRIVMRRDQVLKLCA
NHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAVRFKLQDVADSFKKIFDEAKTA
QEKDSLITPHVSHLSTPRESPCGKIAIAVLEETTRERTDLTQGDEVIDTSSEAGETSSTS
ETTPKAVVSPPKFVFGSESVKSIFSSEKSKPFAFGNSSATGSLFGFSFNAPLKNSNSEIT
SIVHSGPEGKVEPDKCELLQNSDIKQSSDGKVKNLSAFSKENSSTSYTFKTPETGFNFSL
FKSNPMAFWTSIPTSQPESKAQEKSNPEDPPSDPDVVIVYELTPTPEQKGLAEKLLLPST
FFCYKNRPGYVSGEEEDDEDFEMAVKKLNGKLYLDDSEKPLEENLADNDKECVIVWEKKP
TVEERAKADTLKLPPTFFCGVCSDTDEDNGNGEDFQSELQKVCEAQKSQNEKVTDTVGIE
HIVETEVTNPVECKSEEHDSDTKHSSSSPVSGTMDKPVDLSTRKETDMELPSKGESKTVL
FGFGSGTGLSFADLASSNSGDFAFGTKDKNFQWANTGAAVFGTQSTSKGGEDEDGSDEDV
VHNEDIHFEPIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHT
MKNYYRILMRRDQVFKVCANHVITKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVRF
KTKEMTESFKKKFEECQQNIMKFQNGQTSLAAELSKDTNPVVFFDVCADGEPLGRIIMEL
FSNIVPQTAENFRALCTGEKGFGFKNSIFHRIVPDFICQGGDITKYNGTGGQSIYGDKFD
DENFDLKHTGPGLLSMANCGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIES
FGSPKGSVSRRICITECGQL
NT seq
9243 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcaaggccgaggtggagcgatacatcgcctccgtgcagggctccgccccg
tcgccccgagagaagtcaatgaaaggattttattttgcaaagctgtactatgaagctaaa
gaatatgatcttgctaaaaaatacatttctacgtatattaatgtgcaagagagagaccct
aaagcccacagatttttgggtcttctttatgaagtcgaagaaaatatagacaaagctgta
gaatgttacaagcgttcagtggaattaaacccaacacaaaaagatcttgtgttgaagatt
gcagaattgctttgtaaaaatgatgtgaccgatggaagagcaaaatactgggttgaaaga
gcagccaaactttttccaggaagtcctgccatttataaattaaaggaacaacttttagat
tgtaaaggtgaagatggatggaataaactttttgacttgattcagtcagaactttatgca
agacctgatgatgttcatgtaaatatccgactagtagaactttatcgttcaaataaaaga
ttgaaggatgctgtggctcactgtcacgaggcagataggaacacagctttacgttcaagt
ttagaatggaattcatgtgttgtacaaactcttaaggaatatctggagtctctgcagtgt
ttggattctgataaaagtacttggagagcaaccaacaaagacttacttctagcctatgca
aaccttatgctacttacactttccaccagagatgtgcaggaaagtagagaactactggaa
agttttgacagtgctcttcagtctgtgaaatcttctgtgggtgggaatgacgagctgtca
gctgctttcctggaagcgaaagcacatttctacatgcatgttggctcccttcttttgaag
atgggtcagcagagtgacatccagtggcgagctctttctgagctggctgcattgtgctat
cttgtagcatttcaggttccaagaccaaaggttaaattaataaaaggagaagctggacaa
aatctactggaaacgatggcccacgatcgccttagccagtcagggcacatgttgctaaac
ttaagtcgtggcaagcaagactttctaaaggaagttgtggaatcctttgctaacaaaagt
ggccagtctgctctctgtgatgctctgctttccagtcagtcatccaaggagagatctttt
cttggtagtgatgatattggaaaccttgatggacaagtgccagaccctgatgacttggct
agatatgatactggtgctgttcgagcacataatggtagtcttcagcaccttacctggctt
ggcttacaatggaattcactgcctactttaccagcaattcgaaaatggctaaaacagctc
ttccaccatttgcctcaggagacatcaaggctggaaacaaatgcacctgaatcaatatgt
attttagatcttgaagtattcttacttggagttatatataccagtcacttacagttaaag
gagaagtgtaattctcaccacacttcctatcaaccattgtgtttgccacttcctgtgtgc
agacagctttgtacagaaagacagaagacctggtgggatgcagtgtgtactctgattcac
agaaaggcattacctggaacctcagcaaaattgcggcttctagttcaacgtgaaataaac
agtctgagaggccaggaaaagcatggccttcaacctgctctgcttgtgcattgggcacag
agtcttcagaaaacaggcagcagtcttaattccttttatgatcaacgggaatacataggc
agaagtgttcattattggaggaaagttttaccattgttgaagatgatcagaaagaagaat
agtattcctgaacctattgatcccctgtttaaacatttccatagtgtggatattcaggca
tctgaaattggtgaatatgaagaagatgcacacataacttttgctatattggatgctgtt
aatggaaatatagaagatgccatgactgcttttgaatctattaaaaatgtagtttcttat
tggaatcttgcattgatttttcacaggaaagcagaagacattgaaaatgatgccttgtct
cctgaagatcaagaagaatgcaaaaattatctgagaaagactagggactacctgataaaa
attttagatgatagtgattcaaatatttctgtggttcagaaattgcctgttccccttgag
tctgtaaaagagatgctgaactcagttatgcaggaacttgaagactacagtgaaggaggt
cctctttataaaaacggttgcttgcgaagtgctgatgcagacttaaagcattcaacacca
tctcctaccaaatattctctatcaccaagtaaaagttacaagtattctccaaaaacacca
cctcgatgggcagaagatcaaaattctttactgaaaatgatctgccagcaagtagaggcc
attaagaaagaaatgcaggaattgaagttaaatagcaataactctgcatcccctcatcgc
tggccgacagaacattatggacaagacccagctcctgatgggtatcaggggtcacaaact
tatcatggggctccactaacagttgcaactactggcccgtcagtatattatagtcagtca
cctgcatataattcccagtatcttctcagaccagctgctaatgtaactcccacaaagggc
ccagtttatggcatgaataggcttccaccccaacaacatatttatgcatattcccaacag
atgcacacacctccagtgcaaagttcatctgcttgtatgttctctcaggaaatgtatggt
cctcccttgcgttttgagtctcctgcaacaggaattctatcacccaggggtgatgattat
tttaattacaatgttcaacagacaagcacaaatccacctttgccagaaccagggtatttc
acaaagcctccacttgtggctcatgctccaaggtcagcagaatcaaaggttatagaattt
ggaaaatccaatttcgttcagcccatgcagggtgaagtaataagaccacctttaacaaca
ccagcacatacagcacagccaactccctttaaatttaactcaaatttcaaatcaaatgat
ggtgacttcacattttcatcaccacaggtagtgacacagcctccttcaacagcttatagt
aatagtgaaagtcttttaggtctcctgacttcagacaaacctttacaaggagatggctat
agtggactaaaaccaatagctggtcaagctagtgggtctcggaatacattcagttttgga
agcaaaaatacacttacagaaaacatgggcccaaatcagcagaagaattttggttttcgt
cgaagtgatgacatgtttacttttcatggtccagggaagtccatgtttacaacacctgct
tcagagctggcaaataaaagtcatgaaacagatggaggaagtgctcatggggatgaggag
gatgatggtcctcactttgagcctgtggtacctcttcctgacaagatagaagtaaaaact
ggtgaggaagatgaagaagaattcttttgcaatcgtgcaaagttgttccgttttgatggt
gaatccaaagaatggaaggaacgtgggataggcaatgtaaaaatactaaggcataaaaca
tctggtaaaattcgccttctgatgagacgagagcaagtattaaagatctgtgcaaatcat
tacataagcccagatatgaaactgacaccaaatgctggctcagatagatcttttgtatgg
catgcccttgattatgcagatgaattgccaaaaccggaacagcttgcaattagattcaaa
actcctgaggaagcagcactatttaagtgtaaatttgaagaggcccagaacattttaaaa
gctgtaggaacaaatgcatctacagcaccaaatcatactcctagaattgtaaaagaacct
gcaactgtgggtagcaaagatatttgcaaatctgatggtggaaacttgaattttgaattc
cagattgtaaagaaggaaggacctagctggaattgtaacagctgctcgtttaagaatgct
gcaactgctaagaaatgtgtatcatgccagaatacaaacccaaccaataacaaagagctc
ctagttgaaaatggctttgctcctaaaactggcccggaaaatgctcaagatcgatttaca
ttgatgacttcaaataaagaaggtcattgggattgcagtgtttgtttagtaagaaatgaa
cctactgcatctaggtgcattgcatgtcagaacacaaagtctgctaacaaaaatgggtct
tcttttgttcaaacttcttttaaatttggtcagggagatcttcctaagtctgttgacagt
gacttcagatctgtcttttctaaaaaagaaggtcagtgggaatgcagtcagtgcctagtt
ggaaatgaaagaagctctacaaagtgtgttgcttgtcagaccccaggaaaacaggcaaaa
aaatgggattgtagttcgtgctcaacgagaaatgaagcaaatgctgtaaaatgtgttgct
tgtcataatcctgttaaaccaagttcatctgctgcacttccctctttcaagtttggtacc
tcagagatgagtaagccttccaggagtggatttgagggtatgtttgccaagaaggaagga
cagtgggattgtaccatgtgttttatccgaaatgaagccagtgctactcagtgtattgct
tgtcagaatccaaataagcagaatcatcctacatcttctgtgtcagctcctgcctcctca
gaaacaagcaaatctccaaagagtggatttgaaggcttgttcaccaaaaaggaaggagag
tgggaatgtgctgtttgttctctacaaaatgagagctcttccctaaaatgtgtggcttgt
gatgcctccaagccaactcataagcctaatgtagacgctccttcagctttcacagtgggc
tcaaaatcacagttaaatgaacctgcaggaagtcaagtgggaacagaattcaaaagtagc
tttccagaaaagaattttaaagttggcatttcagagcagaaatttaaatttgggcatgtg
gatcaagaaaaagcaccttcctttgcctttcagagtggttctaatacagaatttaagtca
atcaaggatggatttagtttttgcattcctgtatctgctgatgggtttaaattcggcatt
caggaaaagggaaatcaagagaagaagagtgaaaaacctcttgaaaatgatcctagtttc
caagctcatgatattagtggccagaagaatggtagtggtgtgatctttggtcagacaacc
agcaccttcacctttgcagatcttgcaaagtcaacttcaggagaaggatttcaatttggc
aagaaagaccccaatttcaagggattttcaggtgcaggagaaaaattattctcatcacaa
agtggcaaagtggctgaaaaagcaaacacgtcttctgatcttgagaaagatgatgatgcc
tataagactgaggacagtgatgacatccattttgagccagtagtgcagatgccggaaaag
gtggaactagtgacaggagaagaagatgaaaaagttttgtattcacaaagggtgaaatta
tttagatttgatgctgagataagtcaatggaaagaaagaggtttggggaatttaaaaatt
ctcaaaaatgaagtcaatggtaaactaagaatgctgatgcgaagagaacaagtgctaaaa
gtttgtgccaatcattggataaccactacaatgaacctgaagcctctctcagggtcagat
agagcgtggatgtggctagctagtgatttctcagacggtgatgcgaaactggaacaactg
gctgcaaagtttaagacgccagagctagctgaagaattcaagcagaaatttgaggagtgt
caacgacttctcttagacattccacttcagacaccccataaacttgtagatactggcagg
gcagctaaattaatacagagagctgaggaaatgaagagcggactgaaagatttcaaaaca
tttttgacaaatgatcaagtaaaggtcactgatgaagagaacacaagttcaggggcagat
gcttccagtacttcagacactacagtcaagcaaaatcctgataccactgggcctgcctta
gagtgggataactatgacttgcgggaagatgccctggacgacagtgtcagcagcagctca
gttcatgcttctccattggcaagcagccctgtgcggaaaaacctcttccgctttggtgag
tcaactacagggtttaacttcagttttaaatctgctctcagtccatctaagtctcctgcc
aaattgaaccagagtggaacttcagttggcactgatgaagaatctgatgttactcaagaa
gaagagagagatggacagtactttgaacctgttgttcccttacctgatctagttgaagta
tccagtggtgaggaaaatgaacaagttgtttttagtcacagagcaaaactttacagatat
gataaagaagtcggtcaatggaaagaaagaggcattggagatataaagatcttacagaat
tatgataataaacaagttcgcatcgtgatgagaagggaccaggtattaaaactttgtgcc
aatcacagaataactccagatatgactttgcaaactatgaaagggaccgaaagagtgtgg
gtgtggactgcatgtgattttgcagatggagaaagaaaaatagaacatttggctgttcgt
tttaaactacaagatgttgcagactcatttaagaaaatttttgatgaagcaaaaacagcc
caagaaaaagattcgttgataacacctcatgtttctcatctgagcacccctagagagtca
ccatgtggcaaaattgctattgctgttttagaagaaaccacaagagaaaggacagattta
actcagggagatgaagtcatagataccagttcagaagctggggaaacatctagcacttca
gaaacaacaccaaaagcagtggtttctcctcctaagtttgtatttggctcagaatctgtt
aaaagtatttttagtagtgaaaaatcaaagccatttgcatttggcaacagttcagccact
ggttctttgtttggatttagttttaatgcacctttgaaaaatagcaatagtgaaattact
tcaatagtccatagtggacctgaaggaaaagtagaacctgacaagtgtgagctgctacag
aactcagacatcaagcaatcttctgatggcaaagtcaaaaatctcagtgccttttcaaaa
gagaactcttcaactagttatacatttaaaacaccagaaacgggatttaattttagcctt
tttaaatctaatccaatggccttttggaccagcatccctacctcacaacctgagagcaaa
gcacaagagaagagtaaccctgaagaccccccctcagatcccgatgttgtcattgtatat
gagctcactcccactcctgagcagaaaggccttgccgagaaactcctgcttccttcaact
ttcttctgttataagaataggcctggttacgttagtggagaagaggaggatgatgaagat
tttgaaatggctgtcaagaagcttaatggaaaactctatctggatgactcagaaaaacca
ctggaagaaaatctagcagataatgacaaggaatgtgttattgtgtgggaaaagaagcca
acagttgaagagagagcaaaagcagatactttaaagcttccacctacatttttctgtgga
gtctgcagtgatactgatgaggacaatggaaatggggaggattttcagtcagagcttcaa
aaagtctgtgaagctcagaaatcccagaatgagaaagtgactgatacagttggcattgag
catatagttgagactgaagtaacaaaccctgttgagtgtaagtctgaagaacacgattct
gataccaaacatagtagctcatcccctgtttctgggactatggacaagcccgtagatttg
tccactagaaaagaaactgacatggaactcccaagcaaaggggaaagcaagactgttttg
tttggatttggaagtggtacaggcctatcatttgcagacttggcgtcaagtaattctgga
gattttgcttttggtactaaagataaaaatttccagtgggcaaatactggagcagctgtg
tttggaacacagtcaacaagtaaaggtggtgaggatgaagatggcagtgatgaagatgta
gttcataatgaggacatccactttgaacctatagtctccttaccagaggtagaagtgaaa
tctggagaggaagatgaagaagttttgttcaaagagagagccaaactttatagatgggat
agagatgtcagtcagtggaaggagagaggtattggagatataaagattctctggcataca
atgaagaattattatcggatcctaatgagaagagaccaggtttttaaagtgtgtgcaaac
catgttattaccaaagccatggaattaaaacctttaaatgtttcaaacaatgctttagtc
tggaccgcctcagactatgccgatggagaagcaaaagtagaacagcttgcagtaagattt
aagacaaaggaaatgaccgagagttttaagaaaaaatttgaagaatgccaacaaaatata
atgaaattccagaatggacaaacatcccttgcagcagaattatcaaaggacaccaatcct
gtggtgttctttgatgtttgtgcagatggtgaacctctaggacggataatcatggaatta
ttttcaaatattgttcctcaaactgctgagaacttcagagcattatgcactggagagaag
ggctttggttttaagaactccatttttcatcgaatagttccagattttatttgccaaggg
ggagatattaccaaatacaatggaacaggcggacagtccatttatggagataaatttgac
gacgaaaactttgatttgaaacacactggtcctggcttactatccatggccaactgtggc
cagaataccaacagttctcaattttttataacactgaagaaagcagaacatttggacttt
aagcatgtagtatttgggtttgttaaggatggcatggatactgtgagaaagattgaatca
tttggttctcctaaagggtctgttagtagaagaatttgtatcacagaatgtggacagcta
taa
DBGET
integrated database retrieval system
