KEGG   Mastomys coucha (southern multimammate mouse): 116075897
Entry
116075897         CDS       T07224                                 
Symbol
Nedd1
Name
(RefSeq) protein NEDD1 isoform X1
  KO
K16547  protein NEDD1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcoc03036]
    116075897 (Nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mcoc04812]
    116075897 (Nedd1)
Chromosome and associated proteins [BR:mcoc03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     116075897 (Nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     116075897 (Nedd1)
Cytoskeleton proteins [BR:mcoc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     116075897 (Nedd1)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_RFWD3 EIF3I Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_like NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N WD_LRWD1 WDR90_beta-prop_4th KNTC1_N PROPPIN NRBF2 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 116075897
NCBI-ProteinID: XP_031205236
LinkDB
Position
Unknown
AA seq 698 aa
MRGGTSGRPSLTVQAGAGSAARSGWSRAPSVAPRLRGPVMQENLRFASSGDDVKIWDASF
LTLVDKFSPHTSPHGISSICWSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQT
CVDLNSTSMYLASGGLNNTVNIWDLKSKRLHRSLKDHKREVTCVAYNWNDCYIASGSLSG
EIILHSVTTNTSSTPFGHGSKQPVRHLKYSLFRKSLLGSVSDSGVVTLWDVNSQSSYHNF
DSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVANTPLTAVDFMPDGA
TLAIGSSRGNIYQYDLRMLKSPVNTISAHRTSVQCIAFQCSTSLSKASLNKGSSNKATAV
NKRSVPVSSGSGAAQNSGIVREAPSPSIATVLPQPVTTALGRGAGAAQDEAGLTRSKNTD
ILSKETDAGKSQDFSGFDDTGKSSLGDMFSPIRDDAVVNKGGDESVGKGDGLDFLSQLNS
VFPWKNAGASSTLVLHSSPLNVLMGSPGKEENESHELSAETKRAYLGKQEPKDSLKQFTK
LISSGAEPGILNTCPSSNQSRNLEKFEKPEKDIEAQLIHEPSVNGSSPTVPKAASSVTAG
VASSLSEKIVDTLGNSRPSAPLTSVQIRFIQNMIQETLDDFREACHRDIVNLQVEMIKQF
HIQLNEVHSLLERYSVNEGLVAEIERLREENKRLRAHF
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgagaggcgggacttccggccgcccaagtttaacagtccaggcgggagccggaagcgca
gcgaggagcgggtggagccgggccccctctgtggccccacgtttgagaggcccagtcatg
caggaaaacctcagatttgcttcatcaggagatgacgttaaaatatgggatgcctcattt
ctgacattggtggataaattcagccctcacacatcaccgcatggaatcagttcaatctgt
tggagcagcaataataacttcctagtgacagcttcttccagtggtgacaaaatagtggtg
tcaagttgcaaatgtaaacctgttccactgttggagcttgcggaagggcaaaagcagaca
tgtgtcgatttaaattctacgtcaatgtatttggcaagtggaggcctaaataacactgtt
aatatttgggatttaaagtcaaaacgactacatcggtctcttaaggatcataaacgtgaa
gtaacttgtgtggcatacaattggaatgactgttacattgcttctgggtctctcagtggt
gagattatcttacacagtgtaaccactaatacatcaagcacgccttttggccatgggagt
aagcagcctgtccggcacctgaagtactccttgtttagaaagtctctcttgggcagcgtt
tccgatagtggagtagtgactctctgggatgtgaacagtcagagttcataccacaacttt
gacagtacacacaaggctccagcttcaggcatctgcttctctcctgtcaatgaactgctg
tttgtaaccataggcctggataaaagaatcatcctctatgacacttcaagtaagaagcta
gtgaaaaccttagtggccaacactcctctgactgcagtagattttatgccggatggagcc
actttggctattggatcctcccgtgggaatatatatcagtatgacttaagaatgctgaaa
tctcccgtgaacaccatcagtgcccacagaacatctgtgcagtgtatagcatttcagtgc
tccacatctctgtcgaaggcaagtttaaataaaggcagctcaaataaagccacagcagtg
aacaaacggagtgttcctgtgagcagcggcagtggggctgcccagaattctggaattgtc
agagaagcacccagcccttccattgccacagttctcccacagcccgtgacgacagctctg
ggcagaggagcaggggctgctcaggacgaagcaggtttgactcgaagcaaaaatacagat
attttatctaaggaaacagatgctggaaaaagtcaggatttctccggctttgatgatact
gggaagagtagtttaggtgacatgttctcaccaattagagatgatgctgtagtcaacaaa
ggaggtgatgaatctgtaggcaaaggagatggccttgactttctatcacagctaaactca
gtgttcccctggaagaatgcaggtgcctccagcacgctggtgctgcactccagcccactt
aacgtcctcatggggtctccagggaaagaagaaaatgaaagccatgagctgtcagccgag
actaagagagcatacctagggaagcaggaacctaaggactccttgaagcagtttacaaag
ttgatttcttctggtgctgaacctggaattctaaatacctgtccatcgtccaaccaatca
agaaatcttgaaaaatttgaaaagccagaaaaagatattgaagcccagttgatacatgaa
ccctcagtcaatggatcctcacctacagtaccaaaggcagcatcctccgtcactgctgga
gtagccagttcactctcagaaaaaatagtcgatacccttgggaacagtcggccaagtgcg
ccacttacctcagtccagatccgcttcattcagaacatgatccaagaaactctggatgac
ttcagagaagcttgccatagggacattgtgaatttgcaagtggaaatgattaaacagttt
catatacaactgaatgaagtacactctttgctggaaagatactccgtgaatgaagggtta
gtggctgagatcgaaaggctgcgtgaagaaaacaaaagactacgagcccatttctga

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