Mastomys coucha (southern multimammate mouse): 116075919
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Entry
116075919 CDS
T07224
Symbol
Ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116075919 (Ddx17)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116075919 (Ddx17)
Spliceosome [BR:
mcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116075919 (Ddx17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116075919
NCBI-ProteinID:
XP_031205308
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MRGGGFGDRDRDRDRGGFGARGGSGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRSETDRASYANGS
SYGSPNSAFGAQAGQYTYAQGTYGAAAYGTSGYTAQEYAAGTYGASSTASAGRSSQSSSQ
QFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggctttggggatcgggatcgtgacagggaccgtggagggtttggagca
agaggtggtagtgggcttcccccaaagaagtttggtaatcctggggagcggttacgaaaa
aagaaatgggatttgagtgagctccccaagtttgagaagaatttttatgtcgaacatcca
gaagtagcaagactgactccgtatgaggtcgatgagcttcgtaggaagaaagagattacc
gtgagagggggagatgtctgtccaaaacctgtctttgccttccatcatgctaactttcca
cagtatgtaatggatgtgctgatggatcagcactttacagaaccaactcccattcagtgc
cagggatttcctttggcccttagtggcagggatatggttggcattgcacagactggctct
ggaaagacattggcgtatttgctgcctgccattgttcatataaaccaccagccatacttg
gaaagaggagatggcccaatttgtctagtgctggctcctaccagagagcttgctcagcag
gtgcagcaggtggctgatgattatggaaaatgctctagattaaagagtacgtgcatttat
ggaggtgctcctaaaggtccccagattcgagacttggaaagaggtgttgagatttgcata
gccactcctgggcgcctaatagatttcctggagtcgggaaagacaaaccttcgccgatgt
acttaccttgtgttggatgaagctgaccggatgcttgatatgggctttgagccccagatc
cgtaaaattgttgatcaaatcaggcctgaccggcagacactgatgtggagtgcaacttgg
ccaaaggaagtaaggcagcttgcagaggatttcctgcgtgactacacacagatcaatgtg
ggcaatctggagctgagtgccaaccacaacatcttacaaatcgtagatgtctgtatggag
agtgaaaaagatcacaaattgatccagctgatggaggaaatcatggcagaaaaggaaaat
aagaccataatatttgtggagacaaagaggcgctgtgatgacctcacacgaaggatgcgc
agagatggttggcctgctatgtgtatccatggagacaagagtcaaccagaaagagattgg
gtacttaacgagttccgatctggaaaggctcctatcctcattgccacagatgtagcctcc
cgtgggctagatgtggaagatgtcaagtttgtcatcaactacgattatccaaacagctca
gaggattatgttcaccgtattggccgaacggcccgcagcaccaacaagggcactgcctac
actttctttaccccgggcaacctgaagcaggctagagagctgatcaaagtattggaagag
gccaatcaggccatcaatccaaaattgatgcagcttgtggatcacagaggtggcggcgga
ggagggggtaagggaggccgctcacgataccggactacttcttcagccaacaatcccaat
ctgatgtatcaggatgagtgtgaccggaggcttcgaggggtcaaggatggtggccggaga
gattctacaagctacagggatcgtagtgaaaccgatagagccagttatgctaatggcagt
agctatggaagcccgaattctgcctttggggcacaagcaggccaatacacctatgctcaa
ggcacctatggggcagctgcctatggcaccagcggctacactgcccaggagtatgccgct
ggcacttatggggctagcagcaccgcctcagccgggaggagctcccagagctccagccag
cagtttagtgggataggccgatccgggcagcagccacagccactgatgtcacagcagttt
gcacagcctccgggagctaccaatatgataggctacatggggcagactgcttaccagtac
cctccaccccctcctccccctccgccatctcgtaaatga
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