Mastomys coucha (southern multimammate mouse): 116075989
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Entry
116075989 CDS
T07224
Symbol
Nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116075989 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116075989 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116075989 (Nup107)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116075989 (Nup107)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116075989 (Nup107)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116075989 (Nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
116075989
NCBI-ProteinID:
XP_031205394
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MDRSGFGGMSSPVIREAEVTRTARKHSAHKRVLIQANQDENFGTTTPRSQIIPRTPSSSR
QPFTPPSRSLLRHPDISYILGTEGRSPRHIQSSGYLGNLSMVTNLDDSNWAAAFSSQRLG
FYTNTEHHSITEDVNLSTVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENI
CGSQVNILGKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMF
AIAGINASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT
LHSLKQRQLLSYIGSTRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRRIWKISCWRMAEDELF
NKYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTLDESEELPR
EYMEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRS
SLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLISEKHTNLIAFYTCHLPQDL
AVAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDLAPSL
DTGTTEEDRLKIDVIDWLVFDPAQRAEALRQGNAIMRKFLALKKHEAAKEVFVKIPQDSI
AEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLLSQA
TFTEKVAYEHKEKKYEMDHNIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEDDP
ERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKL
LQKLRESSLMLLDQGLDPLGYEIQS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtggctttggggggatgtcatcccctgtgatccgggaggcggaggtgacg
aggactgcccggaagcacagtgctcacaaaagagttctaattcaggccaaccaagatgaa
aattttggtaccactacaccaagaagccagattattcctcgaactccaagctcatcccga
cagcctttcactccgccgagccgaagcctcctgagacacccagacatttcctacattctt
gggacagaagggaggtctccccggcacatacagtcttctgggtacttaggaaatctttcc
atggtgactaaccttgatgacagcaactgggcagctgcattctcatcccagcgtttagga
ttctacacaaacacggagcaccatagtataaccgaggacgtaaacctaagtactgtcatg
cttcgggaagacgaccctggagaggctgcatccatgagtatgttctctgatttcctgcaa
tctttcttgaagcactcttcaaccacagtctttgatcttgtagaagagtatgaaaatatt
tgtggtagtcaggtaaatatcctgggtaaaatagtgagccgagcaacgcctggactgcag
aagttttcaaagacagccagtatgctctggcttcttcaacaggagatggtcacgtggagg
ctgctggcttctttgtatagagacagaatacagtcttcattagaagaagaaaatatgttt
gcaattgctggtattaatgccagcgagaagacggttgtggaagcactgtttcagagggac
tcgctggtccggcagagccagttggtggtagactggctagagagtattgccaaagatgag
attggagatttctcggacaatattgagttttatgcaaaatcggtatattgggaaaatacc
ctccactccttaaagcagcggcagctgctgtcttacataggaagtacccgtcctcttgtc
acggagctggacccagatgctcccattagacagaaaatgccgcttgatgatctggacaga
gaggatgaggtcagactgctgaagtacctcttcactctcatccgtgctggcatgacagaa
gaggcacaacggctctgtaaacgttgtggacaagcatggcgagctgcaaccctggagggc
tggaaactgtaccatgaccctaatgttaatggagggacggagctagaacctgttgaaggg
aatccatatagacggatctggaagattagctgctggagaatggctgaagatgaacttttt
aataaatatgaaagagcgatttatgcagcactgagtgggaatcttaagcagctccttccg
gtctgtgatacctgggaagacacagtgtgggcctacttccgggtgatggtggacagcctg
gtggagcaggagattcggacatcagtaatgacactagatgaaagtgaagagctccctcga
gagtacatggaagcgaattggaccttagaaaaagtttttgaagaacttcaagccactgat
aaaaagagagttctggaagagaatcaagagcattaccatatagttcagaaattccttatc
ctgggagacattgatggtttgatggatgaatttagcaaatggctatccaagagcagaagc
agtctacctggacacctcctccgatttatgacacacctcattctgtttttccgcaccctg
ggactacagaccaaagaggaagtttccattgaagttctaaagacatatatacagctgcta
ataagcgagaagcacacaaacctcatagcattctatacctgtcatttgcctcaagacctc
gccgttgcccagtatgccttatttttggaaggtgttacagaatttgagcagcgacaccag
tgcctagagctggctaaggaagcagatttggatgttgctacgataacaaaaactgtagtt
gagaatattcggaagaaagataatggtgaattcagtcaccatgacctggctccatcctta
gacacaggcactactgaggaggaccgcttgaagatcgatgtgatcgactggctggtgttc
gacccagcacaaagagcggaggccctgaggcaaggcaacgccatcatgaggaagttctta
gcattaaagaaacatgaagctgcaaaagaagtgtttgtgaaaattcctcaggattccatc
gcagaaatctataatcagtgggaggagcagggcatggagagccctcttcctgctgaggat
gataatgctatccgagagcacctgtgtatcagggcctatctggaagcccatgaaaccttc
aacgagtggtttaaacatatgaattcagctccacagaaacctacattactatctcaagca
acttttacagagaaagtggcttatgaacacaaagaaaagaaatacgagatggatcataat
atttggaaaggacatttggatgccctaactgctgatgtgaaggagaaaatgtacaacgtc
ttgttgtttgttgatggaggatggatggtggatgtcagagaggacgcggaggacgaccct
gaacggacgcatcagatggttttactgagaaagctctgtctccccatgctgtgcttcctg
cttcacaccatactgcacagcactgggcagtaccaggagtgcctgcagttggctgacatg
gtgtcctctgagcgccacaagctctatctggtattttctaaggaagaactaaggaaactg
ctgcagaagttaagggaatcctctctaatgctcctagaccagggccttgacccacttggc
tatgaaattcagtcctaa
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