Mastomys coucha (southern multimammate mouse): 116076100
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Entry
116076100 CDS
T07224
Symbol
Med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116076100 (Med16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116076100 (Med16)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
116076100 (Med16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
116076100
NCBI-ProteinID:
XP_031205549
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MAAPDPGRWGECGPRPPGRLGVRGGQEPGTVLGAVGMMDLAYVCEWEKWAKSTYCPSLPL
ACAWSCRNLIAFTTDLRNDDQDLTHMIHILDTEHPWEVHSVSSGHSEAITCLEWDQSGSR
LLSADADGQIKCWSMADHLANSWESSVGSQVEGDPIVALSWLHNGVKLALHVEKSGASSF
GEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVAL
ADIAFTGGGNIVVAAADGSSASPVKFYKVCVSVVSEKCRIDTEILPSLFMRCTTDPNRKD
RFPAITHLKFLARDMSEQVLLCASSQTSSLVECWSLRKEGLPVNNIFQQISPVVGDKQPM
ILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFQDGNVHMVH
RLSLQTMAVFYSSAPRSLDEPALKRPRTTCPAVHFKAMQLSWTSLALVGIDNHGKLSMLR
ISPSLGHPLEPKLALQHLLFLLEYCMVTGYDWWDILLHVQPGMVQSLVERLHEEYTRQKP
ALQQVLSTRILAMKASLCKLSPCTVARVCDYHTKLFLMAITSTLKSLLRPHFLNTPDKSP
GDRLAEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLVSLPNQG
SPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKL
WICCRDEGPASEPDEGLVDECCLLPSQLLVPNLDWLPASDGLVSRLQPKQPLRLRFGRAP
TLPSSTSTLQLDGLTRAPGQPKIDHLRRLHLGAYPTEECKACTRCGCVTMLKSPNKTTAV
TQWEQRWIKNCLCGGLWRKVPLSCS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggatcccgggcgttggggcgagtgtgggccgcggccgcccggccgactg
ggcgtccggggcggacaggagccagggacagtgctgggtgccgtgggtatgatggacctg
gcctacgtgtgtgaatgggagaaatgggccaagagcacatactgcccatcgctgcccctg
gcctgcgcctggtcctgcaggaacctcattgccttcaccacagacctacgcaatgacgac
caggacctgacacacatgatccatatcctagacacggaacacccctgggaagtgcactct
gtcagctctggtcacagtgaggccatcacctgcctggagtgggaccagtcagggtcccgg
ctcctgtctgctgatgctgacgggcagatcaaatgttggagcatggctgaccacttggcc
aacagctgggagagctcagtgggcagccaggtggagggggaccccatcgtggccttgtcc
tggctgcacaatggggtgaagctggcactgcacgtggagaagtctggtgcctccagcttc
ggagagaagttctcacgagtgaaattttccccgtcacttacactgtttggtggcaagcca
atggagggttggattgcagtgacagtcagtggcctggtcactgtgtccctcctgaagccc
agtgggcaggtgctgacatccacagagagcctgtgccggctgcgtggccgagtggcactg
gccgacatcgccttcacaggcggtgggaacattgtggtggctgctgcagatggtagtagt
gcgtcacccgtgaagttctacaaggtgtgcgtgagcgtggtgagcgagaagtgccgcatc
gacacggagatcctgccctcgctgtttatgcgctgcaccaccgatcccaaccgcaaagac
aggtttcctgccatcacacatctcaagttcctggctcgagacatgtctgagcaggtgctc
ctgtgtgcctccagccagaccagcagcctggtggagtgctggtcccttcggaaagagggc
cttcctgtgaacaatatcttccagcagatctcgcctgtggttggtgacaagcagcccatg
atcctcaagtggcggatcctgtcggctaccaacgacctggaccgtgtatctgcggtggca
ctgccaaaactgcccatctcactcaccaacactgacctcaaggtggccagtgacacccag
ttctatccaggccttggcttagcactggccttccaggatggcaatgtgcacatggtgcat
cggctatccctgcagaccatggcggtattctacagctcagccccgcgctccctggatgag
cctgccctgaagcgcccacgcaccacgtgcccggccgtacactttaaggccatgcagctg
tcctggacttctctggccctagtaggcatcgacaatcatgggaagctcagcatgctgcgc
atctctccatccctgggccacccactggagcccaagctggccctgcagcacctgctgttc
ctgctggagtattgcatggtgactggctatgactggtgggacatcctgctacatgtgcag
ccgggcatggtacagagcctggtggagcggctgcatgaggagtacacacgccagaagccc
gccctgcaacaggtcctctccacccggatcctggccatgaaggcctctctgtgcaagctg
tcaccctgtaccgtagctcgtgtgtgcgactaccacaccaagctgttcctcatggccatc
acgtccaccctcaagtcgctgctgcgcccacacttcctcaacacccctgacaagagccct
ggggaccgcttggctgagatctgcgccaagatcaccgatgttgacatcgacaaagtcatg
atcaacctgaagacagaggagttcgtcctagacatgaacactttgcaggcgctgcaacag
ttactacagtgggtgggagacttcgtgctctacctcctggtcagcctgcccaaccagggc
tccccgctgaggcccggccacagcttcctccgagatggtacatccctgggcatgctgcgt
gagttgatggttgtcatccgaatctggggtctgctgaagcccagctgcctgcccgtctac
acggccacctcggacacccaggacagcatgtccctgctcttccgactgctcaccaagctg
tggatctgctgccgtgatgagggcccagccagtgaaccagacgagggtttggtggatgaa
tgctgcctgctgcccagccagctgctggtccccaacctggactggcttcctgccagtgac
ggcctggtcagtcgcttgcagcccaaacagcccctgcgcctgcgcttcggcagggcgccc
actctgcccagcagcacctccaccctgcagctggatggcctcaccagggcccctggccag
cccaagatcgaccatctccggaggctacacctgggcgcctaccccaccgaggagtgcaaa
gcctgcaccaggtgtggctgtgtaaccatgctgaagtcacccaacaagacaacggctgtg
acacagtgggaacagcggtggatcaagaattgcctgtgtgggggactgtggcggaaagtg
cctctcagctgttcctga
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