Mastomys coucha (southern multimammate mouse): 116076183
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Entry
116076183 CDS
T07224
Symbol
Cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116076183 (Cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116076183 (Cnot2)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116076183 (Cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116076183 (Cnot2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
116076183
NCBI-ProteinID:
XP_031205693
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLSTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtggacagcgactaccatgatgagaacatgtactacagccagtcttctatgttc
ccacatcggtcagagaaagatatgctggcatcaccatctacatcaggtcagctgtctcaa
tttggggcaagtttatacgggcaacaaagtgcactaggccttccaatgagggggatgagc
aacaatacccctcagttaaatcgcagcttatcacaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcatacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatctgtatgccaaagcagcagccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagatggcagtgaaaatgtgacaggattggacctttcagatttc
ccagcattagcagaccggaatagaagggaaggaagtggcaacccaactccattaataaac
cccttggctggaagagctccttacgttggaatggtaacaaagcctgcaaatgagcaatcc
caagacttctcaatacacaacgaagattttccagcattacctggttccagctataaagat
ccaacgtcaagtaatgatgacagcaaatctaatttgagtacatcggggaagacgacttca
agtacagatggacccaaattccctggagataaaagttcaacaacacaaaacaataatcag
cagaaaaaggggatccaggtgttacctgatggtcgagttactaacattcctcaagggatg
gtgacggaccaatttggaatgattggcctgttaacatttatcagggcagcagagacagac
ccaggaatggtacatcttgctttaggaagtgacttaacaacattaggcctcaatctgaac
tcacctgaaaatctctatcccaagtttgcatcaccctgggcttcttcaccctgccggcct
caggacatagacttccatgttccatcagaatatttaacaaacattcacattagggataag
ctggctgcaatcaaacttggccgatacggagaagacctcctcttctatctgtattacatg
aacggcggggatgtattacaactcttagctgcagtagagctttttaaccgtgattggaga
taccacaaggaggagcgggtatggattaccagagcaccaggcatggagccaacgatgaaa
accaacacatatgagcggggaacctactacttcttcgactgtctcaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagagcggcctcacctgccatccacc
ttcaactacaaccctgctcagcaagccttctaa
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