Mastomys coucha (southern multimammate mouse): 116076227
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Entry
116076227 CDS
T07224
Symbol
Slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04082
Neuroactive ligand signaling
mcoc04721
Synaptic vesicle cycle
mcoc04724
Glutamatergic synapse
mcoc05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116076227 (Slc1a6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116076227 (Slc1a6)
04721 Synaptic vesicle cycle
116076227 (Slc1a6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
116076227 (Slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116076227 (Slc1a6)
Transporters [BR:
mcoc02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
116076227 (Slc1a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
116076227
NCBI-ProteinID:
XP_031205763
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MSSHGNSLFLRESGAGGGCLQGLQDSLQQRALRTRLRLQTMTREHVRRFLRRNAFILLTV
SAVIIGVSLAFALRPYQLSYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLDNKA
TGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETVPTADAFMDLVR
NMFPPNLVEACFKQFKTQYSTRVVTRTIVRTDNGSELGTSVSPPSSVENETSILENVTRA
LGTLQEVISFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLNEAI
MRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPLIYF
LVTHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVN
MDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVLTSV
GLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLGKPY
KSLMAQEKGASRGRGGNESVM
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccacggcaatagtctgttcctgagagagagcggtgctggcgggggctgtctg
cagggcttgcaggacagtctgcagcagagagcactgcgcacgcgcttgcgcctgcagacc
atgaccagagagcacgtgcggcgcttcctgcgccggaacgccttcatcttgctcacagtc
agcgctgtgatcattggtgtcagcctggcgtttgccttgcgcccataccagctctcctac
cgccagatcaagtacttctcttttcctggtgagctgctcatgaggatgctgcagatgctg
gtgctacccctcattgtctccagccttgtcacaggtatggcatccttggacaacaaggcg
acagggcggatgggaatgcgggcagctgtgtactacatggttactacagtcatcgcagtg
ttcatcggcatcctaatggttaccatcatacatcctgggaagggctccaaggaggggctg
caccgtgagggccgaattgagactgtccctacagctgatgctttcatggacctggtcaga
aatatgtttccacctaaccttgtggaggcctgcttcaaacagtttaagacacagtacagc
acacgagtggtgacaaggacaattgtaaggacagacaacgggtcagagctggggacctct
gtttctcctccatcctcagtagagaatgaaaccagcatcctggaaaatgtcacccgggcc
ttgggcaccctgcaggaggtgataagctttgaggaaactgtgcctgtacctgggtcagcc
aatggcatcaatgccttgggccttgtggtcttctctgtggcctttgggctggtcattggt
ggcatgaagcacaaaggccgtgtcctgagggacttcttcgacagcctcaatgaggctatt
atgaggctggtgggcatcatcatctggtatgcaccagtgggcatcctgttcctgattgct
ggaaagatcctggaaatggaagacatggctgtccttggaggtcagctgggcatgtacaca
ctgactgtcattgttggcttattccttcatgctggtggtgtgttgccccttatctacttc
ctcgtcacccatcggaacccctttcccttcatcggtggtatgctgcaggcactcatcacg
gccatgggcacctcttccagctctgcaactctgcctatcactttccgctgcctggaggag
ggcctgggtgtggaccgccgcatcaccaggttcgtgctgcctgtgggggccactgtcaac
atggatggcactgcactctatgaggccttggcagccatctttattgctcaagtcaacaac
tatgagctcaaccttggtcagatcaccacaatcagcatcacagccacagctgccagtgta
ggagcagctggcatcccccaggcaggactggttaccatggtgattgtgctcacatccgtc
ggcctgcccacagaggacatcacactcatcatagctgtggattggttccttgaccgactt
cgtacaatgactaatgtactgggggactcaattggagcagccgtcattgagcatttgtct
caacgggagctggagctgcaggaggctgagctgactctacccagcctggggaaaccctat
aagtcactcatggcacaagaaaagggggcatcaaggggtcggggaggtaatgagagcgtc
atgtga
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