Mastomys coucha (southern multimammate mouse): 116076292
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Entry
116076292 CDS
T07224
Symbol
Hnrnpm
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116076292 (Hnrnpm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116076292 (Hnrnpm)
Spliceosome [BR:
mcoc03041
]
Common components
Common spliceosomal components
hnRNP proteins
116076292 (Hnrnpm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
Collagen_mid
RRM_occluded
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
116076292
NCBI-ProteinID:
XP_031205863
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MAAGVEAAAEVAATEPKMEEESGAPCVPSGNGAPGPKGDERPTQNEKRKEKNIKRGGNRF
EPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFKM
EESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIPP
SILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDG
KSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHGL
GGIGMGLGPGGQPIDANHLNKGIGMGNLGPAGMGMEGIGFGINKIGGMEGPFGGGMENMG
RFGSGMNMGRINEILSNALKRGEIIAKQGGGGAGGSVPGIERMGPGIDRISGAGMERMGA
GLGHGMDRVGSEIERMGLVMDRMGSVERMGSGIERMGPLGLDHMASSIERMGQTMERIGS
GVERMGAGMGFGLERMAAPTDRVGQTIERMGSGVERMGPAIERMGLSMDRMVPTGMGAGL
ERMGPVMDRMATGLERMGANNLERMGLERMGANSLERMGLERMGANSLERMGPAMGPALG
AGIERMGLAMGGAGGASFDRAIEMERGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLP
FDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGRE
IDVRIDRNA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcggcagccgaggtggcagcgacagagcccaaaatggaggaa
gagagcggcgcgccctgcgtgccgagcggcaacggagctccaggcccgaagggtgacgaa
cgacctactcagaatgagaagaggaaggagaaaaacataaaaagaggaggcaatcgcttt
gagccatatgccaacccaactaaaagatacagagccttcattacaaatataccttttgat
gtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatacgtg
gagctcttaatggacgctgaaggaaagtcaaggggatgtgctgttgttgaattcaagatg
gaggagagcatgaaaaaagctgctgaagttctaaacaagcatagtctgagtggaaggcca
ctgaaagtcaaagaagatcctgatggtgaacatgcaaggagagcaatgcaaaaggtgatg
gctacgactggtgggatgggtatgggaccaggtggcccaggaatgattaatatcccaccc
agtatcctaaataatcctaacatcccaaatgagattatccatgcattacaggctggaaga
cttggaagcacagtatttgtagcaaatctggattataaagttggctggaagaaactgaag
gaagtatttagtatggctggtgtggtggtccgagcagacattttggaagataaagatggc
aaaagccgtggaataggcactgtgacttttgaacagtccattgaagctgtgcaagctata
tctatgtttaatggccagttgctgtttgatagaccgatgcacgtcaagatggatgagagg
gctttaccaaagggagatttttttcctcctgaacgtccacagcaacttccccatggactt
ggtggtattggcatggggttaggacctggagggcagcctattgatgctaaccacctgaac
aaaggcattggaatgggaaacctaggacctgcaggaatgggaatggaaggcataggattt
ggaataaataaaattggaggcatggaaggaccctttggtggtggtatggaaaatatgggg
cgatttggatccgggatgaacatgggccgaataaatgaaatcctaagtaatgcactgaag
agaggagagatcattgcaaagcagggaggaggtggagctggaggcagtgtccctgggatc
gagaggatgggccctggcattgaccgcattagcggtgctggcatggagcgcatgggcgca
ggcttaggccatggcatggatcgagtgggctctgagattgagcgtatgggcctggtcatg
gaccgcatgggctcagttgagcgcatgggctccggcatcgagcgcatgggcccactaggc
cttgaccacatggcctccagtattgagcgcatgggccagaccatggagcgcattggttct
ggtgtggagcgcatgggtgccggcatgggcttcggcctggagcgcatggccgcacccact
gaccgtgtgggccaaaccattgagcgcatgggctctggtgtagagcgaatgggtcctgcc
attgagcgtatgggcctaagcatggatcgaatggtgcccacaggcatgggggccggcctg
gagcgcatgggtcctgtgatggatcgaatggccaccggcctggagcgcatgggcgccaac
aacctggagcgcatgggcctggagcgcatgggagccaacagtcttgagcgcatgggcctg
gagcgaatgggcgccaacagcctggaacgtatgggccctgccatgggcccagcattgggc
gctggtattgagcgaatgggcctggccatgggtggagccggcggtgctagctttgacaga
gccattgagatggaacggggcaactttggaggaagcttcgctggttcctttggcggagct
ggaggccatgcacctggagtagccaggaaggcttgccagatatttgtgagaaatctccca
tttgattttacatggaagatgctaaaggacaaattcaatgaatgtggccacgtgctgtac
gccgacatcaagatggagaacggaaagtccaaggggtgcggtgtggttaagtttgagtct
ccagaggtggctgagagagcctgccggatgatgaatggcatgaagctgagtggccgagag
attgatgttcgaattgatagaaatgcttaa
DBGET
integrated database retrieval system
