Mastomys coucha (southern multimammate mouse): 116076525
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Entry
116076525 CDS
T07224
Symbol
Plxnc1
Name
(RefSeq) plexin-C1
KO
K06572
plexin C
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116076525 (Plxnc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcoc04090
]
116076525 (Plxnc1)
CD molecules [BR:
mcoc04090
]
Proteins
116076525 (Plxnc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
PSI
TIG
Sema
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
116076525
NCBI-ProteinID:
XP_031206208
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MRKGPVASHFHNGKVKRTSAPNLSSPPRPPRSPPPVPSLPLRASPRAPAPHRGTLRRRRT
RRKRLRSAQGLPPRHRLPERARRAPSSLHSFPAEPRGWGGRGSPSARRSRRRRHRRPRLR
RRAPEPPELPRALPGGGPPSPMEVSRRKAPPRPPYPAAPLPLIAYLLALAAPARGADEPV
WRSEQAIGAIAASRADGVFVASGSCLDQLDYSLKNRLSRLYRDQAGNCTEPVSLAPPARP
RPGSSFSKLLLPYREGATGLEGLLLTGWTFDRGACEVRPLGNLNRSSLRDGTEVVSCHPQ
GSTAGVVYRASGTDLWYLAVAATYVLPEPETANRCNPAASDRDTAIALKNTEERSLATQE
LGRLKLRGSAGSLHFVDAFLWNGSVYFPYYPYNYTSGAATGWPSMARIAQSTEVLFQGQA
ALDCGHGHPDGRRLLLSSSLVEAVDIWAGVFSAATGEGQERRSPATTALCLFRMSEIQAR
ARSCSWDFQATEHNCKEGDRPERVQPIASSTLIHSDLTSVYGTVVMNRTVLFLGTGDGQL
LKVVLGENLTSNCPEVIYEIKEETPVFYKLVPHPMKNIYIYLTAGKEVRRIRVANCSKRK
SCSECLAAADPHCGWCLPLQRCTFQGDCTHAGSFENWLDISSGPKKCPKIQIIRNLRERT
TVTIVGSVSARHSECVVKNADTGKLLCQGRSQLNRTCACNIPSRPSYNVLVVNATFSFPS
WNLSERFNFTNCASLKECPACIGTGCAWCKRDKKCIHPFTPCEPSDYERNQDLCQVPVEK
PPKDSEGKVKENKRNRTDGALQVFYIKAIEPQKISTLGKSNVIVTGANFTQASNITMILR
GTSTCEKDVIRVSHVLNDTHMKFSLPSSRKEMKDVCIQFDGGTCSSAGALSYIALPHCSL
IVPATTWISGGQNITIMGRNFDVIDNLIISHELKGNVNVNINVSLRGFLFPTYNFVILNH
GSIHSGPQPDHFLPKPAELRVAKNFVPFATSMCSGLETGGDLLLAALRLLISCYFLLYLK
SCFLFLCFENITRNQDLTTILCKIKSIKNANTIATSSKKVRVKLGNLELYVEQESVPSTW
YFLIALPILLAIVIVVAVVVTRHKSKELSRKQSQQLELLESELRKEIRDGFAELQMDKLD
VVDSFGTVPFLDYKHFALRTFFPESGGFTHIFTEDMHNRDANDKNESLTALDALICNKSF
LVTVIHTLEKQKNFSVKDRCLFASFLTIALQTKLVYLTSILEVLTRDLMEQCSNMQPKLM
LRRTESVVEKLLTNWMSVCLSGFLRETVGEPFYLLVTTLNQKINKGPVDVITCKALYTLN
EDWLLWQVPEFNTVALNVVFEKIPENESADVCRNISVNVLDCDTIGQAKEKVFQAFLSKN
GSPYGLQLNEIGLELQVGTRQKELLDIDSSSVILEDGITKLNTIGHYEISNGSTIKVFKK
IANFTSDVEYSDDHCHLILPDSEAFQVVQGKRHRGKHKFKVKEMYLTKLLSTKVAIHSVL
EKLFRSIWSLPNSRAPFAIKYFFDFLDAQAENKKITDPDVVHIWKTNSLPLRFWVNILKN
PQFVFDIKKTPHIDSCLSVIAQAFMDAFSLTEQQLGKEAPTNKLLYAKDIPTYKEEVKSY
YKAIRCQQILNKLERERGLEEAQKQLLHVKVLFDEKKKCKWM
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggggccagttgcatcccactttcacaatgggaaagtgaaacgcacaagcgca
cccaacctctccagccctccccgcccgcctcgctcccctccgcccgtcccctcccttccc
ctccgcgcctccccgcgagcgcccgcgccgcacagaggaactctccggcgaaggcggacg
aggaggaagcgtctccggagcgcgcagggcttgccgccgcggcacaggctgccggagcga
gcccgccgcgcgccgtcctccctgcactccttcccggccgagccgcggggatggggcggc
cgcgggagcccgagcgcgcgcaggagccgccgccgccgccaccgccgcccgcgtctccgt
cgccgcgcgcctgagccgcccgagctgccgcgcgccctgcccgggggcggcccccctagc
cccatggaggtctcccggaggaaggcgccgccgcgccccccgtatcccgccgcaccgctg
cccctgatcgcctatctgctggcgctggcggcgcccgcccggggcgcggacgagccggtg
tggcgatctgagcaagccatcggagccatcgcggcgagccgggcggacggcgtgttcgtg
gcgagcggcagctgcctggaccagctggactacagcctgaagaacaggctctcgcgccta
taccgggaccaagcgggcaactgcacggagcccgtctcgttggcgccccccgcgcggccc
cggcccgggagcagcttcagcaagctgctgctgccctaccgcgagggggcgaccggcctc
gaggggctgctgctcaccggctggaccttcgaccggggcgcctgcgaggtgcggcccctg
ggcaacctgaaccgcagctccctgcgcgacggcaccgaggtggtgtcctgtcacccgcag
ggctcgacggccggggtggtgtaccgcgcgagcggcaccgacctctggtacctggcggta
gccgccacctatgtgctgccggagccggagaccgcgaaccgctgcaaccccgcggcgtcc
gatcgcgacacggccatcgcgctcaagaacacggaggagcgcagtctggccacgcaggag
ctgggccgcctgaaactgcgcggcagtgcgggcagcctgcacttcgtggacgcctttctc
tggaacggcagtgtctacttcccctactatccctacaactacacgagtggcgctgccacc
ggctggcccagcatggcgcgcatcgcgcagagcacggaggtgctgttccagggccaggcg
gccctcgactgcggccacggccaccccgacggccgccgcctgctgctttcctccagcctg
gtggaggccgtggacatctgggccggcgtgttcagcgcggccactggagagggccaggag
aggcgctcccccgccaccacggctctctgcctcttcaggatgagtgagatccaggcgcgc
gccaggagctgcagctgggactttcaggcgactgaacacaactgcaaagaaggggatcgg
cctgaacgggtccagccgattgcatcgtctacattgatccactctgacctgacgtctgtt
tatggcaccgtggtaatgaacaggactgtactgttcttggggaccggagacggccagtta
cttaaggttgttcttggtgagaatttgacttcaaattgtccagaagtcatctatgaaatt
aaagaagaaactcccgtgttctacaagctcgtccctcatcccatgaagaacatctacatc
tacctaacagctgggaaggaggtgagaagaattcgtgttgcaaactgcagtaaacgtaaa
tcctgttcggagtgcttagcagcggcagacccccactgtggctggtgcctcccgctacaa
aggtgcacttttcaaggggattgcacacatgcagggagctttgaaaactggctggatatt
tcatcaggacctaaaaaatgccctaaaattcagataattcgaaacctccgagagaggacc
acagtgaccattgtgggaagcgtctctgcaagacactcagagtgcgtggtgaagaatgca
gacacgggcaagctgctctgccaggggagaagccagctgaaccggacctgtgcctgcaac
atccccagcagacctagctacaatgtcttagttgtcaatgcgaccttctcctttccgtct
tggaacttatcagaaagattcaacttcaccaactgtgcgtcattaaaagaatgcccagcg
tgtattggaaccggctgtgcttggtgtaaacgagacaagaaatgcatccaccccttcacc
ccctgcgaaccatcagattacgagaggaatcaggatctctgtcaagttcctgtggagaaa
ccacccaaggactcagaaggaaaagtcaaggagaacaagagaaacagaaccgatggggct
ttgcaggtcttctatattaaggccattgagccacaaaaaatatcaaccttagggaaaagc
aatgtgattgttactggagcaaacttcacccaggcgtcaaatatcaccatgatcctgcga
gggaccagtacatgtgagaaggatgtgatccgggttagccacgtgctgaatgacacgcat
atgaaattctcacttccgtcgagccgcaaagaaatgaaagacgtttgcattcagtttgac
ggtgggacctgctcgtccgcgggggctctgtcctacattgctctgccacactgttccctg
atagttcctgccaccacctggatcagcggtgggcaaaacataaccatcatgggcaggaat
tttgacgtcattgacaacctaatcatttcacatgagctgaagggaaacgtaaacgtgaac
ataaatgtaagcttaagaggttttctttttcccacttataattttgttatactaaatcat
gggagcatccattctgggcctcaacctgaccacttcctgccaaagccagcagagctgagg
gtggccaaaaactttgtcccatttgcaaccagtatgtgttcaggcctagaaacaggaggg
gacctgctgcttgctgctcttcggcttctcatttcctgctattttctgttgtacctgaaa
agctgcttcctcttcctgtgttttgaaaacattactagaaaccaagatctcacaaccatc
ctttgcaagatcaagagcattaagaatgcaaacaccattgctacctcctctaagaaagtc
cgtgtcaagctgggaaacctggaactctatgtggaacaggaatctgttccttccacgtgg
tattttctgatcgcgcttccgatcttactggccattgtcatcgttgtggctgtggtggtg
accaggcacaaatcgaaggagctgagtcgaaagcagagccaacagctggagctgctggag
agtgaactccggaaagagatccgtgatggctttgccgagctccagatggataaattggat
gtggttgatagttttggaacagtacccttccttgactacaaacattttgctctgagaact
ttcttccctgagtcaggtggcttcacgcacatcttcaccgaggatatgcacaacagagac
gccaatgacaagaacgagagcctcacagccttggatgccctcatatgtaataaaagcttc
ctggttaccgtcatccataccctggagaagcagaagaacttctcagtaaaggacaggtgt
ctctttgcctccttcctaaccatcgctctgcaaaccaaactggtctacctgaccagcatc
ctggaggtgctgaccagggacctgatggagcaatgcagtaatatgcagcccaagctcatg
ctgaggcgtacggagtctgtggtggagaaactccttacaaactggatgtctgtctgcctc
tctggtttccttcgggagactgttggagagccattctatttgctggtgacgactctgaac
cagaaaataaacaagggtcctgtggatgtgatcacctgcaaagctctgtacacccttaac
gaagactggttgctctggcaggttcccgaattcaatactgtggcattaaatgttgtcttt
gaaaaaatcccagaaaacgagagtgcagatgtctgccggaatatttcagtcaacgttctt
gactgtgataccataggccaagccaaagaaaaggttttccaagccttcctaagcaaaaat
ggttctccatacggactccagctcaatgagattggtcttgagcttcaggtaggaacacgg
cagaaagaactcctggacattgacagttcctctgtgattcttgaagatggaataaccaag
ctaaacaccattggccactatgagatatcaaacggatccactataaaagtctttaagaag
atagcaaattttacttcagatgtggaatactcagatgaccactgccacttgattttacca
gattcagaagcattccaagtagttcaagggaagagacaccgagggaaacacaagttcaaa
gtaaaagaaatgtatctgacaaagctgctgtcgaccaaggtggcaattcactctgtgctt
gagaaactcttcagaagcatttggagtttgcctaatagcagggccccatttgctataaaa
tacttttttgactttttggatgcccaagctgaaaacaaaaaaatcacagaccctgatgtc
gtacatatctggaaaacaaacagcctccctcttcgattctgggtaaacatcctgaagaac
cctcagtttgtctttgacattaagaagactccacacatagacagctgtttgtcagtgatt
gcccaagcattcatggatgccttttctctcacagaacagcaactggggaaggaagcacca
accaataaacttctctatgccaaggatataccaacctacaaagaggaagtgaagtcttac
tacaaagcaatcaggtgtcaacagattctaaataaactagaaagagaacgagggctggaa
gaagctcagaaacaactcttgcatgtaaaagtcttatttgatgaaaagaagaaatgcaag
tggatgtaa
DBGET
integrated database retrieval system
