KEGG   Mastomys coucha (southern multimammate mouse): 116076720
Entry
116076720         CDS       T07224                                 
Symbol
Wdr90
Name
(RefSeq) WD repeat-containing protein 90 isoform X1
  KO
K24759  WD repeat-containing protein 90
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mcoc03037]
    116076720 (Wdr90)
Cilium and associated proteins [BR:mcoc03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   116076720 (Wdr90)
SSDB
Motif
Pfam: WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40 CFA20_dom WD40_MABP1-WDR62_1st WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_SCAP Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 116076720
NCBI-ProteinID: XP_031206398
LinkDB
Position
Unknown
AA seq 1886 aa
MASAEAGSASYSAMAGGSGAREARCRPVSRLGSPGSEVPAASLTGLRAEARPVGGGGGSR
RTAQDRCSGGVLSAAWQHPFLNVFRHFRVDEWKRSSKEGDVAVVTDKVLKSAVYRIRGSV
SASNYIQLPRTSTQSLGLTGRYLYVLFRPLSSKHFVIHLDVATEDGQVIRVSFSNLFKEF
KSSATWLQFPFVLEAKSPRRGGDLTGVPPPRARWTCLQLDLRDVLMSYLSRHYSHLKSIR
LCASLLVRNLYTSDLCFDPALIIVAVTVTEARRAKLSVNPMPREMAFPVPKGESWHDHYI
HIRFPSDGSKAPNEQVEKNCSRPEAVFLGHMSQRLPHPVVFGKPLLRSRSPVAQTSSPAL
PCQVLSASSRLPEVSLKYPEVSSVNAFSIRGQRPSAWDEVTDAHTVAGGKHVLADKSSGV
PMALSDIGSCKPFLPDPVLRLKGVIGFGGHSTQWALWTKDGVAVVYPCHAVIVVLQIDTG
QQRFFLGHTDKVSALALNGSDTVLASAQVQPPSMVRLWDFQTGGCLSLFRSPLHTICSLS
FSGSGALLCGVGKDRHGRTVVVAWDTDQLGLGGEVVVLAKVHTDFDVQTFHIAFFDETRM
ASCGRGSVRLWRLWGGVLRSCAVDLGEYCSLELTDLAFAQAPDGHCAPSASVLFVCSRSG
HILEIDHQRMAVQHVRRLLPAQSPDVPLTEKQNFSMGPGIAISSLSVSTTTCAVGSEDGY
LRLWPLDFSSVLLEAEHDGPVSSVSFSPDGLRVLSTTTSGHLGFLDVPSREYTVLARSHM
APVLALSTELNRGQMATVSLDHTVRIWDLATLQQLYDFSSSEDTPCAVAFHPTMPSFFCG
FRSGAVRSFSLENSRVLVEHTRHRGAITSLVITPDGRFLFSSCSQGSLVQYSCAVSRCCV
LRVAANMVCQDGRPNPNILAVSGDSCRLAFVGPSKCMVTIVELASLDELLHVDVSTHLDW
AVAVCFSPGNSGHLLVSTASNKVVVLDAVSGHAIRELSSVRSRACSSLALSEDARLLLAA
TGQTITVWDYPTQVNPSCQVYIGHSEPVHAVAFTPDQLQVISVGDAIFLWDILATPERDG
SDPEAPPVHEADSSAGQRKDLASGASGLPRQQVPIPSPASPSPLSTHDRLLEGSTGTFSI
SDEEGLCEENHISEAFLQGQAPTLPVLVEKEASGAGDAPREAAKSSWTPAELPGHHSQMS
EWSLRSGKAGLPTRPDSYKHFTARYKACTRVKSVSFPPTGREQLRLKAVVGYNGNGRANM
VWRPDTGFFAYTCGRLVVVEDLHSGTQRHWLGHSQEISTLALNQDGQILASASCCGHTAA
CCQIRIWDVPKGLCRQLLSHHDTAVQALAFSPDDEFLVTLGDYADRNLALWSMATYELLS
STRLLEPVHGVAFNPWDANELICVGTSAITFWLLQHHGADTSFQVHREPVPEELGASELT
SLCYGASPLLYCGSSSGQICVWDTGTGHCFLAWEADDGEIGVLLCSGSRLISGSNTKRLR
LWAVGVVPELRRKGSSARSSSVFMERELTLDGAVVSASFDSGMDMGVVGTTAGTIWYINW
TEGTSTRLISGHRTKVNEVVFSPSESHCATCGEDGSVRVWSLASMELVIQFQVLNQSCLC
LSWTPPSCGLPEQQQVVAGYSDGTLRVFSISRTAMELKMHPHRTALTAIAFSTDGQTILS
GDKDGLVAISHLCSGMTFRVLSDHRGAPISAIQSTSKEYGDLGIEGVELWLAASGDQRVS
IWVSDWLQDRCELLEWLSFPAPALSEAPGLLPPSLAAFCPWDRATLVCVGLGAHEEAVFY
SLRQKQVVQKTPLPFFAMSLSLSPGAQLMVVGFAECMLRLLDCAAGTAQDFEGHDDSVHL
CRFTPSGRLLFTAAHNEILVWEVTGS
NT seq 5661 nt   +upstreamnt  +downstreamnt
atggcgtccgctgaggcgggaagcgcgagctatagcgccatggctggaggtagcggcgcg
cgcgaggcgcgctgtcgtccggtctcgcgtcttgggagtcccgggtccgaggtccccgct
gcgtcactgactggacttcgtgcagaagcccgtcccgtgggtggaggtggagggtctcgg
cgcactgcccaggaccggtgctcagggggcgtcctttctgcagcctggcagcatcctttc
ctcaacgtattcagacacttcagggtggatgagtggaaacggtccagcaaagagggagat
gtggctgtggtgacggacaaggtcctgaagagcgctgtgtatcgcatccgtgggtctgta
tctgccagcaactacatccagctccccagaacgagcacccagtccctggggctgactggg
cggtacctctatgtgcttttccggcccctgtcttccaagcactttgtcatccacctggac
gtggccaccgaggacggccaggtcatccgtgtgtctttctccaacctctttaaggagttc
aagtcctccgcaacatggcttcagttcccctttgtcctcgaggccaagtcacccaggaga
ggtggtgacctgacaggtgtacctcctcctcgtgcccgctggacctgcctgcagctggac
ctgcgagatgtcctgatgtcctacctgagtcggcactatagtcacctcaagagcatccgg
ctgtgtgccagcctgctagtcagaaacctctacaccagtgatctgtgctttgatcctgcc
ctgatcattgtagctgtcactgtcactgaagcccggcgtgcaaagttgtctgtcaaccct
atgcctcgagaaatggctttcccggtgccaaaaggggagagctggcatgaccattacatc
cacattcggtttccaagtgacggctcaaaggcacctaatgagcaggttgagaagaactgt
tcccgtccagaggcagtcttcctaggtcatatgtcacagcgcctgcctcatccagtggtc
tttggcaaacctttgctgaggagtaggtcccctgtggcccagacatctagccctgcattg
ccgtgccaggtcctttcagcatccagtcgtcttccagaggtcagcctaaagtacccagaa
gtctccagtgtaaatgccttcagtatccgtggccaacgtccttcagcctgggatgaggtt
accgatgcacacacggtggctggtgggaaacacgttcttgctgacaaatcatctggagtg
cccatggccctttcggacattggctcctgtaagcccttcctcccagacccagtcctgagg
ctcaagggagtcatcggctttgggggtcacagcacccaatgggctctgtggaccaaagat
ggtgtggctgttgtttacccctgccatgcagtcatagtcgtcctgcagattgacactgga
cagcagagatttttccttggtcacaccgacaaggtctctgccctggcgctcaatggcagt
gacacggtgctagcctcagctcaagtacagcctcccagcatggtgcgtctctgggacttc
cagactgggggatgcctgtctctcttcagaagcccactgcacaccatctgctccctcagc
ttctctggcagtggggcactcctctgcggtgtgggcaaggacagacacgggaggacggtg
gtggtggcctgggacacagaccagctgggccttggcggtgaggttgtggtcctggcaaaa
gtgcatactgactttgatgttcagaccttccacattgccttttttgatgaaaccaggatg
gcatcatgtggtcggggcagtgtgcggctgtggcggctgtggggtggtgtccttcgatcc
tgcgctgtggacctgggggagtactgttcactggagctcactgaccttgcctttgcacag
gcaccggatggccactgtgcaccctctgctagcgtgctctttgtgtgcagccgtagtggt
cacatcctggaaattgaccaccagcgcatggctgtgcaacacgtccgccgcttgctgccc
gcacagtcccctgatgttcccctcaccgagaagcagaacttcagcatgggccccggcatt
gctatcagtagcctcagtgtctctactaccacatgtgctgtgggctctgaggatggctac
ctgcgactctggcccctggacttttcctcagtgctcctagaggccgaacacgatggccct
gtcagttcagtctccttcagtcccgatggcctgcgtgtgctgtccaccaccacttcaggc
cacctgggctttctggatgtcccctcccgggagtatactgtgttggcgcggtcccacatg
gccccagtgttggcgctttctacagaactgaaccggggacagatggccactgtgtccctt
gaccacactgtccgcatctgggacctggctaccctacagcagctgtatgacttctcatcc
tctgaggatactccttgtgctgtagcctttcaccccacaatgccgagcttcttctgtggc
ttcaggagtggggccgtgcggtccttcagcttggagaactccagagtcctggtagaacac
acgcgtcaccgaggggccatcaccagcctggtcatcacccctgacggcagattcctgttc
agctcctgctctcagggctccctagtccagtacagctgtgctgtctcccgatgctgcgtc
ctacgtgtggcagctaacatggtctgtcaggatggtcgccccaaccccaatattctggca
gtcagtggagacagctgccggctggcctttgtgggcccctccaagtgcatggtgacaatt
gtggagttggcctccttggatgagctactccatgttgatgtcagcacccacctggactgg
gctgtggctgtctgcttcagccctgggaactcaggccatctgctggtgtccacggcctct
aacaaggttgtggtactggatgctgtgtcaggacacgctatccgagagttatctagcgtc
cgctccagagcctgctcctccctggccctcagtgaggatgctcgtttgctgctggcagcc
actggccagaccattacagtgtgggattatccaacacaggtgaaccccagctgccaggta
tacatcggccactcagagcctgtgcacgctgtagccttcacacctgatcagctgcaggtc
atcagtgtgggagatgccatcttcctctgggacatcctggccacccctgagagagatgga
agtgatcctgaggcccccccagtgcatgaggctgactctagtgcaggccagcggaaggac
ctggcatctggggccagtggactccctcggcagcaagtgcccataccgtctccagcatcc
ccgtccccactgagtacccatgacaggcttcttgaaggaagtactggcaccttctccata
tctgatgaggaaggactctgtgaggagaaccatatttctgaggcattcctccaaggccag
gccccgaccctacctgtgcttgtggagaaggaggccagtggtgctggggatgctcctcgg
gaggctgcaaagagctcttggacacctgcagagcttcccggtcaccacagccaaatgagt
gaatggagccttcggagtggaaaggctgggctcccaacccgcccagattcctacaagcac
ttcactgctcgatataaggcctgtacacgggttaagagcgtctccttccctcccactggc
agagagcagctgcgactgaaggccgtcgtgggctacaatgggaatgggcgggccaacatg
gtctggaggccggacacaggcttctttgcctacacatgtggtcgcctggtggtagtggag
gacctgcattctggcacccagcggcactggcttggccattcccaggagatctctactctc
gcactcaaccaggatggccagatcttggcctctgcctcctgctgtggccacacagctgcc
tgctgccagatccgaatttgggatgttcccaagggcctctgtcggcaactcctttcccac
catgacacagctgtgcaagctctggctttctcaccagatgatgagttccttgtaacgttg
ggggactatgctgaccggaaccttgccctgtggagcatggccacctatgaactcctgtca
tccactcgcctcctggagcctgtgcatggtgtagcctttaacccatgggatgccaatgag
ctcatctgtgtgggcacaagtgccatcaccttctggctcctgcagcaccatggggcagac
accagcttccaggtacaccgagagccagtccctgaggaactgggggcgtctgagttgacc
tcactctgctatggggccagccctctgctctactgcggttctagctctggccagatctgt
gtctgggacactggcactggccactgcttcttggcctgggaggctgatgatggggagatt
ggagtgctgctgtgttcaggctctagactaatcagtggaagtaacacaaaaaggctgcgc
ctttgggctgtgggagttgtgccagagctgaggcgcaaaggctccagtgccagatccagt
tctgttttcatggagcgtgagctgaccctggatggggctgttgtgagtgccagctttgac
agtggcatggacatgggtgtggtgggcaccacagctggcacaatctggtacatcaactgg
acagagggcactagcacccgcctcatcagtggccacaggaccaaggtaaacgaggtggtc
ttcagccccagtgaatctcactgtgccacctgtggcgaggatgggagcgtgagagtgtgg
tctttggccagcatggagctggtgatccagtttcaggtgctgaaccagagctgcctctgc
ctttcgtggacgcccccatcctgtggactcccagagcagcagcaggtggtggctggctat
agtgatggcacacttcgagtcttcagcatctctcgtactgcaatggaactcaagatgcac
ccccaccggaccgctctgacagccattgccttctccactgatggtcagaccatcctatct
ggagataaggacggacttgtggctataagccacctctgctcagggatgaccttccgtgtg
ctcagtgaccaccggggtgctcccatctctgctatccagagcacaagcaaagaatatgga
gacctagggatagagggtgtagaactgtggctggctgcgagtggggaccagcgtgtcagc
atctgggtctctgattggctccaggaccgctgtgagctcctggaatggttgagctttcct
gcacctgccctctcggaggctccgggcctcctgcccccctctcttgctgccttctgccct
tgggatagggcaacactggtgtgtgtcggcctcggcgcacatgaagaggcagtcttctac
agcctccgccaaaagcaggtggtacagaagacacctctgcccttctttgccatgtccttg
agcctgtccccaggggctcagctcatggtggttggttttgctgaatgcatgctgaggctc
ctagactgtgcagcagggactgcccaggactttgaaggtcatgatgactcggtacacctg
tgtaggttcacaccatccggcagactgctcttcactgctgctcacaacgagatcctggtg
tgggaagtcactggctcctga

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