Mastomys coucha (southern multimammate mouse): 116076767
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Entry
116076767 CDS
T07224
Symbol
Casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116076767 (Casc3)
09122 Translation
03013 Nucleocytoplasmic transport
116076767 (Casc3)
03015 mRNA surveillance pathway
116076767 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116076767 (Casc3)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116076767 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
116076767
NCBI-ProteinID:
XP_031206538
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGSPARGGGSGSGSAGGGGSGSLPSQRGGRGGGLHL
RRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEEYSEEENSKVELKSEANDA
ADSSAKEKGEEKPESKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIP
RKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYD
IRSAHNPDDIKPRRIRKPRFGSSPQRDPNWTGDRSSKSHRHQGPGGNLPPRTFINRNAAG
TGRMSASRNYSRSGGFKEGRTSFRPVEVAGQHGGRSAETLKHEANYRSRRLEQTTMRDPS
PEPDAPLLGSPEKEEVASETPAAVPDITPPAPDRPIEKKSYSRARRTRTKVGDAVKAAEE
LPPPSEGLTSAATVPETTPAAKTGNWEAPVDSTTGGLEQDVAQLSIAEQSWSPGQPSFLQ
PRELRGMPNHIHMGAGPPPQFNRMEEMGVQSGRAKRYSSQRQRPVPEPPAPPVHISIMEG
HYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPNPGLYPPPVS
MSPGQPPPQQLLAPTYFSAPGVMNFGNPNYPYAPGALPPPPPPHLYPNTQAPSQVYGGVT
YYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcccaggacactgaggacgaagaatctggtgct
tcgggttccgacagcggctctccggcgcggggcggcggcagtggcagcgggagcgccgga
ggcggcggcagtggctcgctgccttctcagcgcggcggccgcggcgggggccttcatctg
cggcgggtggagagcgggggcgccaagagcgcagaggagtccgagtgtgagagtgaagat
ggcatggaaggagatgctgttctttccgattacgaaagtgcagaagattcagaaggtgag
gaagaatacagtgaagaggagaattccaaggtagagctgaaatcagaagctaatgatgct
gctgattcttctgcaaaagagaagggagaagaaaagcctgaatctaaaggcactgtgact
ggggagaggcaaagtggagatggacaggagagcacagagcccgtggagaacaaagtgggt
aaaaaaggccctaagcatttggatgatgatgaagatcggaaaaatccagcctatattccc
aggaaagggctcttctttgagcatgatcttcgaggacagactcaggaagaggaagtccga
cccaagggacgacagcgaaagctatggaaagatgaaggtcgctgggagcacgataagttc
cgtgaggatgaacaggcaccgaaatctcgacaggagctaattgcactttatggctatgac
attcgatctgctcacaatcctgatgacatcaaacccagaagaatccggaaacctcgattt
ggaagttccccacaaagagatccaaactggactggtgatcgatcaagcaaatcccatcgc
caccagggtcctgggggcaatctaccacctaggacatttattaacaggaatgcagcaggt
actggccgcatgtctgcatccaggaattactctcgatctgggggcttcaaagaaggccgt
actagtttcaggcctgtggaggttgctgggcagcatggtggccggtctgctgagactctt
aagcatgaagctaattaccggtcacggcgtctggagcagactactatgagggatccatct
ccagaaccagatgctccattgcttggaagtccagagaaagaagaggtggcctcagagaca
ccagctgctgtgcctgatatcacaccaccagctcctgacaggcccattgagaagaaatcc
tattcccgggcaagaaggaccaggaccaaagttggggatgcagtcaaagctgctgaggag
ctccctcctccatctgaagggctcacttcagcagccactgtcccagaaactactccagct
gctaagactggaaactgggaggctcccgtagattctaccacaggtggacttgagcaggat
gtggcacagctaagtatagcagaacaaagttggagtccaggacagccttccttcctgcag
ccacgggaactccgaggtatgcctaaccacatccatatgggagcaggacctccacctcag
tttaaccggatggaagaaatgggtgtccagagtggtcgagctaagcgttattcatcccag
cggcagagacctgtgccagagccccctgctcctcctgtgcatatcagtatcatggaggga
cattactatgatccattgcagttccagggaccaatctatacccatggtgacagccctgcc
ccactgcccccacagggcatgattgtacagccagaaatgcaccttcctcacccaggttta
cacccccaccagtcaccagctcctctccccaatccgggtctctacccaccaccagtgtcc
atgtctccaggacagccaccaccccagcagttgcttgctcctacctacttttctgctccg
ggtgtcatgaattttggtaaccccaattacccttatgctccgggagcattgcctcctcct
ccacctcctcatctgtatcctaacacacaggccccatcacaggtatatggaggcgtgact
tactataatcctgcccagcagcaggtacagccaaagccctccccaccccggaggactcct
cagccggtctccatcaagcctcctccacctgaggttgtaagcaggggctccagttaa
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