Mastomys coucha (southern multimammate mouse): 116076827
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Entry
116076827 CDS
T07224
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04371
Apelin signaling pathway
mcoc04613
Neutrophil extracellular trap formation
mcoc05034
Alcoholism
mcoc05203
Viral carcinogenesis
mcoc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116076827 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116076827 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
116076827 (Hdac5)
05203 Viral carcinogenesis
116076827 (Hdac5)
09165 Substance dependence
05034 Alcoholism
116076827 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116076827 (Hdac5)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116076827 (Hdac5)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116076827 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
116076827
NCBI-ProteinID:
XP_031206669
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MLLVPRAQGLVGMLQTIYETESCFSADGMSGREPPLEILPRTPLHSIPVAVEVKPVLPGA
MPSSMGGGGGGSPSPVELRGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQ
HDHLTRQHEVQLQKHLKQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNK
EKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSG
PPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMIPQHR
ALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQS
GTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSP
LVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQ
LGKILTKTGELSRQPTTHPEETEEELTEQQEALLGDGALTMPREGSTESESTQEDLEEEE
EEEEEEEEEDCIQVKDEGVESGPDEGPDLEESSAGYKKLFADAQQLQPLQVYQAPLSLAT
VPHQALGRTQSSPAAPGSMKSPTDQPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHA
GRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLL
GPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELRNGFAIIR
PPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVL
YISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPI
AQEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDL
TAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSKHWSCVQRFAAGL
GCSLREAQTGEKEEAETVSAMALLSVGAEQAQAVATQEHSPRPAEEPMEQEPAL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggtgcccagggctcaggggcttgtggggatgctgcagaccatctatgagacc
gagtcctgtttctcagcagatggcatgtcaggccgggaaccacccttggaaatcctgccg
cggactcctctgcacagcatccctgtggcagtggaggtgaagccagtgctgccaggagcc
atgcccagctccatggggggtggaggtggaggtagccccagccctgtggagcttcggggg
gctctggcgggccccatggaccctgcgctccgggaacagcaactgcagcaagagctcctg
gtgctcaagcagcagcagcagcttcagaagcagctcctgtttgccgagttccagaaacag
catgaccacctgacccggcagcacgaagtgcagctgcagaagcacctcaagcagcagcag
gagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgcgagcagcag
cggcaggaggagctggagaaacagcggctggagcagcagctgctcatcctacgcaacaag
gagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccaggaattc
ctgttgtccaagtcaaaggagcccacgccaggcggcctcaaccattccctcccacagcac
cccaaatgctggggagcccaccatgcttctttggaccagagttcccctccccagagcggc
cctcctgggacgcctccctcctacaaattgcctttgcttgggccctatgacagccgtgat
gactttcccctccgtaaaacagcctcggaacctaacttaaaagtccgttcaaggctaaaa
cagaaagtagcggagaggagaagcagccccctcctgcgtcgaaaggatggcactgttatt
agtacttttaagaagagagcagttgagatcacaggcacggggcctggggtgtcgtccgtg
tgtaacagtgcgcccggctctggccccagctctcccaacagttcccacagcaccatcgct
gagaacggctttactggctcagtccccaacatccccactgagatgatcccccagcaccgg
gccctccctctggacagttccccaaaccagttcagcctctacacgtctccttctctaccc
aacatctccctagggctgcaggccactgtcactgttaccaactcgcacctcaccgcctcc
ccgaagctgtccacacagcaggaggctgagaggcaggcccttcagtccctgcggcagagc
ggcacactgaccggcaagttcatgagcacatcctccatccctggctgcctgctgggagtg
gcactggagggcgacacaagcccccatgggcacgcttccctgctgcagcatgttttgttg
ctggagcaggcccggcaacagagcacgctcatagcggtgccgctccatgggcagtcccca
ttggtgacaggtgaacgtgtggccaccagcatgaggacggtgggcaagctcccgaggcac
cgacctctgagccgcactcagtcctccccactgccgcagagtccccaggccctgcagcag
ctggtcatgcagcagcagcaccagcagttcctagagaagcagaagcagcagcagatgcag
ctgggcaagatccttaccaaaactggggagctatcaaggcagcccaccacccaccctgag
gagacagaggaggagctgacggaacagcaggaggccttgctgggggacggtgccctgacc
atgccccgggaaggctctacagagagtgagagcacccaggaagacctagaagaggaggag
gaggaggaagaggaggaggaagaggaggactgcattcaggtcaaggatgagggtgtcgag
agtggtcctgatgagggccccgacttagaggagtccagtgctggttacaaaaagttgttc
gcagatgcccagcagttacagcccctccaggtgtaccaggcacccctcagcctggccact
gtgcctcatcaggccctgggccgcacccagtcctcacctgctgctcctgggagcatgaag
agccccacagaccaacccactgtagtgaagcacctctttaccacaggtgtggtctatgac
acgttcatgctgaagcatcagtgtatgtgcggaaacacacacgtgcacccagagcatgct
ggccgcatccagagcatctggtcccggctgcaggaaactggtctgctcagcaagtgtgag
cggatccggggtcgtaaagccacactggatgaaatccagactgtgcactctgagtaccac
accctgctctatgggaccagcccccttaaccggcagaagctggacagcaagaagctgctt
ggccccatcagccagaagatgtatgccatgctgccttgtgggggcattggggtggacagt
gacactgtgtggaatgagatgcactcttctagtgccgtgcgaatggcagtgggctgcctg
gtggagctggccttcaaggtggctgcaggagagctcaggaatgggtttgctatcatccgg
cccccaggacatcatgctgaggagtccacagccatgggattctgcttcttcaactccgta
gccatcacagctaaactcctgcagcagaagctgagcgtgggcaaggtcctcatcgtggac
tgggacattcaccatggcaacggcacccagcaagcattctacaacgacccctctgtgctc
tacatctccctgcatcgctacgacaatgggaacttctttccaggctctggggctcctgaa
gaggttggtggagggccaggtgtggggtacaacgtaaatgtggcgtggacaggaggtgtg
gatccccccattggagatgtggaatacctgacagccttcaggacagtggtgatgcccatt
gcccaggagttctcacctgacgtcgtcctagtctccgctgggtttgatgctgttgaagga
catctgtctccactgggtggctattctgtcaccgccagatgttttggccacttgaccagg
cagctcatgacactggcagggggccgggtggtgctggccctggagggaggccacgacttg
accgccatctgtgatgcctctgaggcctgtgtctcggctctgctcagcgtggagctgcag
cccttggatgaagcagtcttgcagcaaaagcccagcatcaatgcagttgccacactagag
aaagtcatcgagatccagagcaaacactggagctgtgtacagaggtttgcggctggtctg
ggctgctcgctgcgggaggctcagacaggtgagaaagaggaggccgagactgtgagcgcc
atggccctgctttccgtgggggctgagcaggcccaggctgttgccactcaagagcacagc
cccaggccggcagaggagcccatggagcaggagcctgccctgtga
DBGET
integrated database retrieval system
