Mastomys coucha (southern multimammate mouse): 116076870
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Entry
116076870 CDS
T07224
Symbol
Prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116076870 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116076870 (Prpf8)
Spliceosome [BR:
mcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
116076870 (Prpf8)
Complex C
U5 SnRNP specific factors
116076870 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
116076870
NCBI-ProteinID:
XP_031206757
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTVTEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgtttccttaccgagggccgggtaacccggtgcccggtcctctagccccg
ctgccggattacatgtcagaggagaagctgcaggagaaagctcgaaaatggcagcagttg
caggccaagcgctatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgcctccagaacatgtcaggaagatcattcgagaccacggagacatgaccaacaggaag
ttccgacatgacaaaagggtctacttgggagctctcaagtacatgcctcatgcagttctt
aagctcctggagaacatgcccatgccttgggagcagatccgggatgtgcctgtgctgtac
cacatcactggagccatttcctttgttaacgagattccttgggttatcgagccggtttac
atctcccagtgggggtcaatgtggatcatgatgcgtagagaaaaaagagacaggcggcat
ttcaagaggatgcgttttcccccttttgatgatgaggaaccacccctggattatgccgac
aacatcttagatgttgagccactggaagccattcagctagagctggatcctgaggaggat
gcccctgtactggactggttctatgaccaccagccattgagagacagtagaaagtacgtt
aatggttccacctaccagcgctggcagttcacattgcctatgatgtccactctctaccga
ctggccaatcagcttctgactgacttggtagatgacaactacttctatctttttgatctg
aaggccttctttacctctaaggcactcaacatggccattcctgggggacccaaatttgaa
cctcttgttcgagacatcaacctgcaggatgaagactggaatgaatttaacgatattaat
aagatcatcatccgtcagcctattcgtactgagtacaagattgcttttccttacctgtat
aacaaccttccacaccatgtccacctgacctggtaccacactcctaacgttgtgttcatc
aagactgaggatcctgatttgccagctttctactttgatcctctgatcaacccaatctcc
catagacactcagtcaagagccaagaaccactgcctgatgatgatgaggagtttgaactc
ccagagtttgtagagcccttcctgaaggatacacctctctatacagacaatacagccaat
ggcatcgccctgctctgggcaccacggcccttcaacctacgctctggtcgtacccgccgg
gccctggacattccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagttcgagtctcctatcagaagctgcttaagtattatgtgctgaatgccctcaag
catcggcctcccaaagcccagaagaagaggtatctgttccgctctttcaaagctaccaaa
ttctttcagtccaccaagctggactgggtggaggtagggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaagaacctcaactatctgcacttggactac
aatttcaacctgaagcctgtcaagacactcaccaccaaggaaagaaagaaatcccgtttt
gggaatgctttccatctgtgccgggaagttcttcgtttaactaagctggttgtggatagt
catgtgcagtatcgcttgggcaatgtagatgccttccagctggcagatggactgcagtat
atatttgcccacgtgggacagttgacgggcatgtatcgatacaaatataagctgatgcgg
cagatccgcatgtgcaaggacttgaaacatctcatctattaccgcttcaacacgggtcct
gtagggaaaggccctggctgtggtttctgggccgctggctggcgggtctggctgttcttt
atgcgtggaatcacccctctgctagagcgatggctgggcaacctgctggctcgacagttt
gaaggacgtcactcaaagggggtggcgaagacagtaacaaagcaacgagtagagtcccat
tttgacctcgagcttagggcagctgtgatgcacgatattctggacatgatgcctgaaggc
atcaaacagaacaaggcccgaacaattctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccttggaaggtcccaggactgccaacacctatagagaatatgattctt
cggtatgttaaggccaaggctgattggtggaccaatactgcccactacaaccgtgaacgg
atccgtcgtggggccactgtagacaagactgtttgcaaaaagaatctgggtcgcctcact
cgcctgtatctgaaggcagaacaggagcggcagcacaattacctgaaggatgggccttac
atcacagcagaggaagctgtggcagtgtatactaccactgtgcactggttggaaagccgt
aggttctctcccatcccgttccccccactctcctacaagcatgataccaagctgctcatc
ctggctctggagcgtctcaaggaagcttatagtgtgaagtctaggttaaaccagtctcag
agggaggagctgggtctgattgaacaagcctatgacaacccccatgaggctttgtcccgc
atcaagcgtcacctccttacacagagagcctttaaagaagtgggcatcgagtttatggat
ctctatagccaccttgtgccagtctatgatgtggaaccattggagaaaataacagatgct
tacctggaccagtacctgtggtatgaagcagataaacgccgtcttttcccgccctggatc
aagcctgctgacacagaaccacctccactgcttgtttataagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagacgagtgagggcgagtgcaacgtcatgctggagtctcgg
tttgagaagatgtatgagaagattgacctgacgctgcttaacaggctgctgcgactcatt
gtggaccacaacatagctgactacatgacggccaagaacaatgtagtcatcaactataag
gacatgaaccatacaaactcatatggaatcatccgaggcctgcagtttgcctcatttatt
gtacagtactatggcttagtgatggatttgcttgtactgggattacaccgggccagtgag
atggctgggcctcctcagatgccaaatgactttctcagtttccaggacatagccaccgag
gctgcacacccaatccgactcttctgtagatacattgatcgcatccacattttcttcagg
ttcacagcagacgaggctcgggatctgatccagcgttacctgacagaacatccagacccc
aacaatgaaaacattgttggctacaataacaagaaatgctggccacgagatgcccgaatg
cgtctcatgaagcatgatgtcaacttgggtcgagcagtgttctgggacatcaaaaatcgg
ctgccacgatcagtgacaacagtacagtgggagaatagctttgtgtctgtgtacagtaaa
gacaaccccaacctgttattcaacatgtgtggctttgagtgccgcatcctgcctaagtgc
cgtaccagctatgaagagttcacccacaaggacggggtctggaatctacagaatgaggtt
accaaggagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcaacgcttc
cataaccgtgtgcggcagattctgatggcttctggctccaccactttcaccaagattgtg
aataagtggaatacagctctcatcggccttatgacatattttcgagaggctgtggtaaat
acacaggaactcctggacttattggtgaagtgtgaaaacaagatccagacacgtatcaag
attggattaaactccaagatgccaagtcggttccccccggttgtattctacacccctaag
gagctgggtgggcttggcatgctctcaatgggccatgtgcttatcccccagtccgacctc
aggtggtccaagcagacagatgtgggcatcacacacttccgttcaggaatgagtcatgaa
gaagaccaactgattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gactcccaacgggtctgggcggagtatgcacttaagagacaggaggctattgctcagaac
aggcgcttgactttagaagatttagaagattcgtgggatcgaggcattccccggatcaat
acccttttccagaaagaccgccacacattggcttatgataaaggctggcgtgtccgaact
gactttaaacagtaccaggttttgaagcagaaccccttttggtggacacatcagcggcat
gatggcaagctttggaacctcaacaactaccgcacagacatgattcaggccctgggtggc
gtggagggcattctggagcacacactcttcaagggcacttacttccccacctgggaaggt
ctgttctgggagaaagccagtggctttgaggaatccatgaagtggaagaagctgaccaat
gctcagcggtcaggattaaaccagattcctaatcgtagattcaccctctggtggtcccca
acaatcaatcgagccaatgtctatgtaggcttccaggtgcagctggacttgacaggaatc
ttcatgcatggcaagatccccacactgaagatctctctcatccagatattccgagctcac
ttatggcagaagatccacgagagcatagtgatggatttatgtcaggtcttcgaccaggaa
ctggatgcactggaaattgagacagtacaaaaggagacaatccatccccgaaaatcctat
aagatgaactcttcctgtgcagatatactactctttgcttcctataaatggaatgtctcc
cggccctcactgctggcagactccaaggatgtgatggacagcaccaccacacagaagtat
tggattgacatccagttgcgctggggggactatgattcccatgatattgagcgctatgcc
cgagccaaattcctggattacaccacagacaacatgagtatctacccttcacccacaggt
gtgctcattgccattgatctggcctataatctacacagtgcctatggaaactggttcccg
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatacgcaaaggattgcagctgtattcatctgagcccactgag
ccctacctgtcttctcagaactatggtgaactcttctctaaccagattatctggtttgtg
gatgacaccaatgtatatagagtaactatccacaagacttttgaggggaacttgacaacc
aaacccatcaatggggccatcttcatcttcaatccacgcacaggacagctgttcctcaag
ataatccacacatctgtatgggctggacagaagcgtttgggtcagttggccaagtggaag
actgctgaggaagtggctgccttgatccgatctctgcctgtggaagaacagcctaaacag
atcattgtcactcggaagggcatgctggatcctctggaggtacacttattggacttcccc
aatattgtgatcaaaggatcggagctccagctgcccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccacagagccccagatggttctcttcaacctctat
gatgactggctcaagactatctcatcctacacggctttctcccgtctcattctgattctg
cgtgctttgcatgtgaacaatgatagagcaaaggtgatcctgaagccagacaagactact
gttactgaaccccaccacatctggcccacactgactgatgaggagtggatcaaggtggag
gtgcagctcaaggatctgatcttggctgactacggcaagaaaaacaatgtgaatgtagca
tcactgacacaatcagaaattcgagacatcatcctggggatggagatctcagcaccctcg
cagcagcggcagcagatagctgagattgagaagcagaccaaggagcagtcccagctcact
gctacacagactcggactgtcaacaagcatggcgacgagatcatcacttcaaccactagc
aactatgagacccagaccttctcgtcgaagacagagtggagagtcagggccatctctgct
gccaacctgcatctacggaccaatcacatttatgtttcatctgatgacatcaaggaaact
ggttatacgtatatccttcccaaaaatgtgcttaagaagttcatctgcatatctgatctt
cgtgcacaaattgcaggatacctatatggggtgagccctccggataaccctcaagtgaag
gagatccgttgtattgtgatggtgccacagtggggcactcaccagactgtgcacctgccc
agccagctgccccagcatgagtacctcaaggagatggaacccttaggctggatccacact
caacccaatgaatccccccagctatcaccccaagatgtcaccactcatgccaaaatcatg
gctgacaacccatcgtgggatggagagaagaccattatcatcacctgcagcttcacccca
ggctcctgcacactgacagcctacaagctgacccccagtgggtatgagtggggccggcag
aacacagacaaaggcaacaaccccaaaggctacctaccgtcgcactacgagagggttcag
atgctcctgtcagaccgattcctgggcttctttatggtccctgcccagtcctcctggaac
tacaactttatgggtgttcgacatgatcccaacatgaaatacgagttgcagctggcaaac
cccaaggagttctaccatgaggtccacaggccctcccacttcctcaacttcgccctcctg
caggagggtgaggtctactctgcagacagagaggacctctatgcctag
DBGET
integrated database retrieval system
