Mastomys coucha (southern multimammate mouse): 116076896
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Entry
116076896 CDS
T07224
Symbol
Abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116076896 (Abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116076896 (Abca5)
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
116076896 (Abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
116076896
NCBI-ProteinID:
XP_031206813
LinkDB
All DBs
Position
Unknown
AA seq
1642 aa
AA seq
DB search
MATAIRDVGVWRQTRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILVSMMHPNKKYEE
VSDIELNPMDKSSLSKLVLGYTPVTNITSSIMQRVSTDHLPDAIVTEEYANEKEMLASSL
SKSSNFVGVVFKDIMSYELRFFPDMIPVSSIYMDSRAGCSKSCDAAQYWSSGFTVLQASI
DAAIIQLKTNVSLWRELESTKAVIMAEAAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHI
VAEKEKKLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSSIVIF
LLFFLYGLSSVFFALMLTPLFKKSKHVGVVEFFVTVAFGFVGLLIVLVESFPRSLVWLFG
PLCQCAFLIGIAQVMHLEDFNEGALFSNLTEGPYPLIITIIMLALDSVFYVLLAVYLDQV
IPGEFGLRRSSLYFLKPSYWSKNKRNYKELSEGNINGNISLNEIVEPVSSEFIGKEAIRI
SGIQKAYRKKNENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASI
YGHRVSEIDEMFEARKMIGICPQSDINFDVLTVEENLSILASIKGIPANNIIQEVQKVLL
DLDMQAIKDNQAKKLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYR
KANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSLFLKSKWGIGYRLSMYIDRYCAT
ESLSSLVRQHIPAAALLQQNDQQLVYSLPFKDMDKFSGLFSALDIHSNLGVISYGVSMTT
LEDVFLKLEVEAEIDQADYSVFTQQPREEETDSKSFDEMEQSLLILSETKAALVSTMSLW
KQQVSTIAKFHFLSLKRENKSARSVLLLLLIFFAVQIFMFLVHHSFKNAVVPIKLVPDLY
FLKPGDKPHKYRTSLLLQNSTDSDINDLIDFFAHQNVMVAMFNDSDYVSAAPHSAALNVV
RSEKDYVFTAVFNSTMVYSLPVMMNIISNYYLYHLNVTEAIQIWSTPFIQEITDIVFKVE
LYFQAALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWVGQAIVDIPLFFAV
LTLMLGSLFAFHHGLYFYPVKFLAVVFCLIAYVPSVILFTYIASFTFKKILNTKEFWSFI
YSVTALACVAVTEITFFLGYAVTAVFHYTFCIAIPIYPLLGCLISFIKGSWKNIPKNENT
YNPWDRLLVAVIMPYLQCILWIFLLQHYEKKHGGRSTRKDPFFRALSQKAKNKKFPEPPI
KEDEDEDVKAERLKVKELMGCQCCEEKPAIMVCNLHKEYDDKKDFLHSRKTTKVATKYIS
FCVKKGEILGLLGPNGAGKSTIINILVGDVEPTSGKIFLGDYSSHSDDGDESLKYMGYCP
QTNPLWPDITLQEHFEIYGAVKGMSSSDMKEVISRITKALDLKEHLQKTIKKLPAGIKRK
LCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIQTAFKNKKRAALLTTHYMEEAEAVC
DRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQREIQYIFPNASRQ
ESFSSILAYKIPKEDVQSLSQSFAKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEED
NSCGTLNSSLWWERTQEDRVVF
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaattagggatgtgggagtttggagacagaccagaacacttctactgaaa
aattacctaattaaatgcaggactaaaaaaagtagtgttcaggaaattctttttccacta
tttttcttattttggctgatattagttagcatgatgcatccaaataagaaatatgaagaa
gtatctgatatagaactcaaccctatggacaagtccagcctttccaagcttgttcttgga
tatactccagtgactaacatcacaagcagcattatgcagagagtatctactgatcatctt
cctgatgctatcgttactgaagaatacgcaaatgagaaagaaatgctagcatccagtctt
tctaagtccagcaacttcgtaggtgtggttttcaaagacatcatgtcctacgaacttcgt
ttttttcctgatatgattccagtgtcttctatttatatggattcaagagcaggctgctca
aagtcatgtgatgctgctcaatactggtcctcagggtttacagttctacaggcatcaata
gatgctgccattatacagttgaagaccaacgtgtctctgtggagggagctggagtcaacc
aaagctgtcatcatggcagaagctgcggtggtggagattgacaccttcccccgaggggtc
atcctcatctacctcgtcatagccttttcacccttcgggtactttctggcaattcacatt
gtagcagaaaaagaaaaaaagttaaaggaatttttaaagataatgggacttcatgacact
gctttctggctctcctgggttcttctgtacacaagtttgattttccttatgtcccttctt
atggccgtcattgcaacagcttcttcgttattccctcagagtagcagcattgtgattttt
ctactgttcttcctgtatggattgtcatctgtgttttttgctttaatgctgacgcctctt
tttaaaaaatcaaaacatgtgggagttgttgagttttttgtcaccgtggcatttggattc
gtcggcctgttgatagtcctcgtagaaagtttccccaggtcactggtgtggctcttcggt
cctttgtgtcagtgcgcctttttgattgggattgcacaggtcatgcatttagaagatttt
aatgagggtgccttattttctaatttgaccgaaggtccctaccctctaattatcactatc
atcatgctagctcttgacagtgtgttctacgtcctcctggctgtctatctcgaccaagtc
attccaggggaatttggcttgaggaggtcatctttgtactttctaaagccatcatattgg
tcaaaaaacaaaagaaactataaggagttatcggaaggcaacattaatgggaatattagt
ctcaatgaaattgttgagcctgtttcttcagaatttataggaaaagaagctataagaata
agtggtattcagaaagcctatagaaagaaaaatgagaatgtggaggctttgagaaatttg
tcatttgacatatatgaaggtcagatcactgcactgctgggccacagtggaacaggaaag
agcacattgatgaatattctgtgtggactgtgcccaccttctgatgggtttgcttctata
tatggacacagagtctctgagatagatgaaatgtttgaagcaagaaaaatgattggcata
tgtccacagtcagatataaactttgatgtcctgacagtagaagaaaatttatcaattttg
gcttcaatcaaaggaataccagccaacaatataattcaagaagtgcagaaagttttactg
gatttggacatgcaagccatcaaagataatcaagcaaaaaaattaagcggtggccaaaaa
agaaagctgtctttaggaattgcagttcttgggaatccaaagatactcctgctagatgag
ccaacagcaggcatggacccctgctctcgccacattgtttggaatcttctaaaatacaga
aaggctaacagagtgaccgtatttagtactcacttcatggatgaggccgacattcttgcc
gacaggaaagctgtcatatcacaaggaatgctgaaatgtgttggttcttcacttttccta
aaaagtaaatggggaatcggctaccgcctgagcatgtatatagatagatactgtgccaca
gagtcgctgtcctcactggttaggcagcacatacccgccgccgctctgctgcagcagaat
gaccagcagctcgtgtacagcttgcctttcaaagacatggacaaattttcaggcttgttt
tctgctctagacattcattcaaacctgggtgttatttcttatggtgtttccatgacaaca
ctggaagatgtattcttaaagctagaagttgaagcagaaattgaccaagcagattatagt
gtattcacacagcagccacgggaggaagaaacagattcaaaatcttttgatgaaatggaa
cagagtttacttattctttctgaaaccaaagctgctctagtgagcaccatgagcctttgg
aagcagcaagtgtctacaatagcgaagtttcatttcctctcattgaaacgagaaaacaaa
tcagcgcgctctgtgttgcttctgcttttaattttttttgcagttcagatttttatgttt
ttggtccatcattcttttaaaaatgctgtggttcccatcaaacttgttccagacttgtat
ttcctaaagcctggagataaacctcataaatacagaacaagcctgctgctccagaactct
actgactcagatatcaatgatcttattgactttttcgcacaccagaacgtaatggtggca
atgtttaatgacagtgactatgtgtctgctgctcctcacagtgcggctctaaatgtggtg
cgttccgaaaaggactatgtttttactgctgttttcaacagtactatggtttattcttta
ccagtaatgatgaacatcatcagtaactactatctttaccatctaaatgtgactgaagct
atccagatctggagtaccccattcattcaagaaattactgacatcgtttttaaagttgag
ctatattttcaagcagctttgcttggaatcattgttactgcaatgccaccttactttgcc
atggaaaatgcagaaaatcataagatcaaagcttatactcaacttaaactttcaggtctt
ttgccatcagcctattgggttggacaagctattgtggatattcccttgttttttgctgtt
ctgactttaatgctgggaagtttatttgcatttcatcatggactgtatttttatcctgta
aaatttcttgctgtggtcttttgcctcattgcttatgtgccctcggttattctgttcacg
tacatagcttcattcaccttcaagaaaattttaaataccaaggaattttggtcatttatc
tattctgtgaccgcattggcttgtgttgcagtcacggaaataactttctttctgggatac
gcagttacggctgtttttcattacacattctgcatagccatcccaatctacccactcctg
ggctgtctgatctctttcataaagggttcttggaagaatataccaaaaaatgagaatacc
tacaatccctgggacagacttttagttgctgtaatcatgccctacctgcagtgtatactt
tggattttcctcttacaacactatgagaaaaaacatggaggcagatctacgagaaaggat
ccatttttcagggccctctcacaaaaagccaaaaataagaagtttccagaaccacctatc
aaggaggatgaagatgaagatgtgaaagctgaaagactgaaggttaaggagctgatgggt
tgccagtgttgtgaggagaagccagccattatggtatgcaatttgcataaagagtatgat
gacaagaaagattttcttcattcaagaaaaacaacaaaagtagcaacaaaatacatctct
ttctgtgtgaaaaaaggagagatcttgggactgttaggtccaaatggtgctggcaaaagc
acaattattaatattctggttggggatgttgaaccaacttcaggcaagatatttctagga
gattatagttcgcattcagatgatggtgatgaatccctgaagtatatgggttactgtcct
cagacaaacccactgtggccagatattactctgcaagaacattttgaaatttatggagct
gtgaaaggaatgagttcaagtgacatgaaggaagtaataagtcgaataacaaaagccctt
gatttgaaagaacatcttcagaaaactataaagaaactacctgcagggatcaagcgaaag
ctgtgttttgctctcagtatgctggggaaccctcaggtgacgctgctggatgagccatcc
acaggtatggaccccagagccaaacagcacatgtggagagctattcagactgcatttaaa
aacaagaagcgggctgctcttctgactactcattacatggaagaagcagaggctgtctgt
gaccgcgtggccatcatggtgtctggacagctaagatgtattggaacagtacaacatcta
aagagtaagtttggtaaaggctactttttggaaattaaattaaaggactggatagaaaac
ctggaaatagatcgccttcaaagagaaattcaatatattttcccaaatgcaagccgtcaa
gagagcttttcttctattttggcttataaaattccaaaagaagatgttcagtctctctca
caatcctttgctaaattggaagaagcaaaacatacttttgccattgaagaatacagcttt
tctcaagcaaccctggaacaggttttcgtagaacttactaaagaacaagaggaagaagat
aatagctgcgggactttaaacagctcactctggtgggaaaggacgcaggaagacagagta
gtgttttga
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integrated database retrieval system
