Mastomys coucha (southern multimammate mouse): 116076992
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Entry
116076992 CDS
T07224
Symbol
Cntnap1
Name
(RefSeq) contactin-associated protein 1 isoform X1
KO
K07379
contactin associated protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04514
Cell adhesion molecule (CAM) interaction
mcoc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116076992 (Cntnap1)
04517 IgSF CAM signaling
116076992 (Cntnap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
116076992 (Cntnap1)
Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
116076992 (Cntnap1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
ConA_2nd_BAM2
EGF
F5_F8_type_C_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
116076992
NCBI-ProteinID:
XP_031207029
LinkDB
All DBs
Position
Unknown
AA seq
1383 aa
AA seq
DB search
MMSLRLFSILLAAVVSGARGWGYYGCNEELVGPLYARSLGASSYYGLFTTARFARLHGIS
GWSPRIGDPNPWLQIDLMKKHRIRAVATQGAFNSWDWVTRYMLLYGDRVDSWTPFYQQGH
NATFFGNVNDSAVVRHDLHYHFTARYIRIVPLAWNPRGKIGLRLGIYGCPYTSNILYFDG
DDAISYRFQRGVSQSLWDVFAFSFKTEEKDGLLLHTESSQGDYVTLELQGAHLLLHMSLG
SSPIQPRPGHTTVSAGGVLNDLSWHYVRVDRYGRDANLTLDGYVHRFVLNGDFERLNLEN
EIFIGGLVGAARKNLAYRHNFRGCIENVIYNRIDIAEMAVQRHSRITFEGNVAFRCLDPV
PHPISFGGPHNFVQVPGFPRRGRFAVSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQV
NVSIAQTGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTG
TSYFFGGCPKPASRWSCHSNQTAFHGCMELLKVDGQLVNLTLVEFRKLGYFAEVLFDTCG
ITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGVTCHEPLYKESCEAYRLSGKYSGNYT
IDPDGSGPLKPFVVYCDIRENRAWTVVRHDRLWTTRVTGSSMDRPFLGAIQYWNASWEEV
SALANASQHCEQWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGL
DQSCVDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVVGDTNRSSSEAQFFLRPLRCY
GDRNSWNTISFRTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPFCQWRRPYVR
VELNTSRDVVFAFDIGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLR
PMPLQTYIWLEYDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTFPNCTG
HCTHPRFPCFHGGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFETGTWMRYNLQSALRS
AAREFSHMLSRPVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNI
TGEEVSFSFSTSSAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVT
DGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQ
RYNTPGFSGCLSGVRFNNVAPLKTHFRTPRPMTAELAEAMRVQGELSESNCGAMPRLVSE
VPPELDPWYLPPDFPYYHDDGWIAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNE
PKATHDSHPGSKAPLPPSGPAQASAPTPAPTQVPTPAPAPVPAPGPGPRDQNLPQILEES
RSE
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtctccggctcttcagcatcctgctcgccgcggtggtctctggagctcggggc
tggggctactacggctgcaatgaggagctggtggggcctctgtatgcacggtctctgggc
gcttcctcctactatggactctttaccacagcccgctttgcccggctacatggcatcagt
gggtggtcgccccggattggggaccctaatccctggctccagatcgacttgatgaagaag
catcggatccgggctgtggccacacagggagcctttaattcttgggattgggtgacacgt
tacatgctgctctacggggaccgtgtggacagctggacgccattctaccaacaggggcac
aacgcgaccttcttcggcaatgtcaatgactcggcagtggtacgccatgacctacactac
cattttactgctcgctacatccgcatcgtgccactggcctggaacccgcgcggcaagatt
ggcctgaggctgggcatctatggttgtccctacacatccaacatcctgtattttgacggc
gatgatgccatctcataccgcttccagcgtggcgtcagccaaagtctttgggacgtgttc
gcttttagtttcaagacagaggagaaggatgggctgttgctgcacaccgagagctcccag
ggcgattatgtgacacttgaactgcaaggggcgcacctgctgctgcacatgagcctgggc
agcagtcccatccagccaagacctggtcacaccacggtgagcgctggtggcgttcttaac
gacctaagctggcactatgtgcgggtggaccggtatggccgagatgcaaatctcaccctg
gatggttacgtccatcgcttcgtgctcaacggcgactttgaaaggctgaatctcgaaaat
gagatattcatcgggggtctagtgggcgcagcacgtaagaacctggcctaccgccataac
ttccgtggctgcatagaaaacgtgatctacaaccggatcgacatcgctgaaatggcagtc
cagcgccattcgcggatcacctttgagggtaatgtggctttccgatgcttggatcccgtc
ccacaccccatcagtttcggaggccctcacaactttgtccaagtgcctggcttcccacgt
agaggccgcttcgcagtctctttccgcttccgcacctgggacctcacagggctactcctc
ttctcccgcttgggggacgggctgggtcacgtggagctgatgcttagtgaagggcaagtc
aatgtatccatcgcacagactggccgcaagaagcttcagtttgctgctgggtaccgcctg
aatgatggcttctggcacgaggtgaactttgtggcacaggaaaaccatgcagttatcagt
attgatgatgtggaaggggcagaggtcagggtctcatacccactgctgatccgcacaggg
acttcatacttctttggtggttgtcccaaaccagccagtcgatggagctgccactccaac
cagactgcgttccatggttgcatggagctgctcaaggtggatggtcagctggtcaacctc
actctggtagagtttcggaagcttggttactttgctgaagtcctctttgacacatgtggc
atcacagacagatgcagccctaacatgtgtgagcatgatggacgctgctaccagtcctgg
gatgacttcatctgctactgcgaactgaccggctacaagggagttacctgccacgaacca
ttgtacaaggagtcctgtgaagcctatcggctcagtgggaagtattctggaaactacacc
attgatcctgatggcagtggacccctgaagccatttgtagtgtattgtgacatccgagag
aaccgagcgtggacagttgtgcggcatgataggctgtggaccactcgagtgactggttcc
agcatggaccggccctttctgggggccatccaatactggaatgcctcctgggaggaagtc
agtgctctggccaatgcttcccagcactgtgagcagtggattgagttctcctgctacaat
tcccggctgctcaacactgcaggaggctacccttacagcttttggattggccgaaacgag
gagcagcatttctactggggaggctcccagcctgggatccaacgctgtgcctgtgggctg
gaccagagctgtgtggaccctgcactgcactgcaactgtgatgctgaccagccgcagtgg
agaacagacaaggggctcctgacctttgtagaccatctgcctgtcactcaggtagtggta
ggtgatacaaaccgctccagttctgaagctcagttcttcctgaggcctctgcgctgctat
ggtgaccgcaattcctggaacactatctccttccgcactggagctgcactgcgtttccct
ccaatccgtgccaaccacagcctcgatgtctccttctacttcaggacctcagctccctcg
ggagtcttcctagagaacatggggggtcctttctgccagtggcgccgaccttatgtgaga
gtggagctcaacacatcccgggatgtggtctttgcctttgatattggcaatggagatgag
aacctgacagtgcactcagatgacttcgagttcaacgatgatgagtggcatttggtccgg
gctgaaatcaatgtgaagcaggcccggctccgagtggaccatcggccctgggtgctaagg
cccatgcccctgcagacctacatttggctggagtatgaccaacccctctatgtgggatct
gcagagcttaagaggcgcccttttgtgggctgcttgagggccatgcgtttgaatggagtg
actctgaacttggagggccgtgccaatgcctctgagggaaccttccccaactgcacgggt
cactgcacccacccccggttcccctgtttccatggaggacgctgtgtggaacgatacagc
tactacacatgtgactgtgacctcacagcttttgatgggccatattgcaatcatgatatt
ggtggattctttgagaccggcacatggatgcgctataatctccagtcagcactgcgctct
gcagcccgggagttctctcacatgctgagccggccagtgcctggctatgagcctggctat
attccaggctacgacactcccggttacgtgcctggatatcatggccctgggtaccgcctg
ccggactacccaaggcctggccggccagtgcctgggtatcgggggcctgtctacaatatt
actggagaggaggtctcctttagcttcagcaccagctctgctcctgcagtcctgctctac
gtcagctcctttgtacgtgactacatggctgtgctcatcaaggaagatgggaccctacag
cttcggtatcagttgggcaccagtccctacgtgtaccagctaaccacccggccagtgacc
gatggccaaccccatagtgtcaacatcacccgggtctaccgaaacctctttatccaggtg
gactacttcccgctgacagaacagaagttctctctcttggtggacagccagctggactca
cccaaggctttgtatctagggcgtgtaatggagacaggagtcattgacccagagattcag
cggtacaataccccaggtttctcaggctgcctgtctggtgtccggtttaataatgtggct
cctctcaagacccatttccgaacccctcgtcccatgactgctgagctggcagaagctatg
cgggttcaaggagaactgtcagaatctaactgtggagctatgccacgccttgtctctgag
gtgccaccagagcttgatccctggtacctgcccccagatttcccatactaccatgacgac
ggatggattgccatactcttaggttttttggtggccttcctgctgctggggcttgtggga
atgctggtgctgttctatctgcaaaatcatcgatacaagggctcctaccacaccaacgag
cccaaggccacgcacgactcccaccctggcagcaaagctcccctgcctccctcaggccct
gcccaggcctctgcccctactccagctcccacccaggttccgaccccagccccagcccca
gtcccagccccaggcccaggccccagggaccagaacctcccccagatcctggaggagtcc
aggtctgaatga
DBGET
integrated database retrieval system
