Mastomys coucha (southern multimammate mouse): 116077215
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Entry
116077215 CDS
T07224
Symbol
Nup50
Name
(RefSeq) nuclear pore complex protein Nup50 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116077215 (Nup50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116077215 (Nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116077215 (Nup50)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116077215 (Nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
116077215
NCBI-ProteinID:
XP_031207458
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MIPLAVDGSAGSGPPPRRRFTKMAKRVAEKELTDRNWDEEDEVEEMGTFSVASEEVMKNR
AVKKAKRRNVAFESDSGGAFKGFKGLVVPSGGGGFSGFGGSGGKPLEGLTNGNSTDNATP
FSSAKTAAEPKAAFGSFAVNGPTTLVDKKISSPKCNSSNQLPSSGPASSTACTGNTYHKQ
LAGLNCSVRDWIVKHVNTNPLCDLTPIFKDYERYLATIEKQLENGGSSSSESQTDRVTVG
MDPPSLFGSTKLQQDSPFSFHGNKAEDTSEKVEFTAEKKSDTAQGATSASFNFGKKVESS
VLGSLSSGSLTGFSFSPGNTSLFGKDAAQSTAASSPFSAKASENQAGGSSRDGEEEENDE
PPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGVGTLHLKPTATQKTQLLVRADTNLGN
ILLNVLVPPNMPCTRTGKNNVLIVCVPNPPLDEKQPALPATMLIRVKTSEDADELHKILL
QKKDA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgatccccttggccgtggacgggtcggctgggagcggacctccgccccggcggaggttc
acaaaaatggcgaagagagttgcggagaaggaattaacagataggaattgggatgaagaa
gacgaagttgaagagatgggaacattctcggtggccagcgaggaagtcatgaagaacaga
gccgtaaagaaggcaaagcgtagaaacgttgcatttgaatccgatagcggaggagccttt
aaaggcttcaaaggtttggttgtgccttctggaggaggagggttttctggatttggtggc
tctggagggaagcctctggaaggactgacaaatggaaacagcacagacaatgccacaccc
ttctccagtgcaaagacagcagcagagcccaaggcagcctttggttcttttgctgtgaat
ggccctactaccttggtggataaaaagatttcgagtcccaaatgcaatagcagcaaccag
ctgccctcgtccggccctgcttccagtactgcctgcactgggaacacctatcacaagcag
ttggctggcttgaactgctctgtccgcgactggatagtgaagcatgtgaacacaaacccg
ctttgtgacctgacgcccattttcaaagactacgagagatacttggcgacgatcgagaag
cagcttgagaacggaggtagcagcagttctgagagccagacggacagggtgacggttgga
atggatcctccttccctttttggttcaacaaaactacagcaagattcaccattttcattt
catggcaacaaagcggaggacacatctgaaaaggtggagtttacagcagaaaagaaatcg
gacacagcacaaggagcaacaagtgcctcgtttaatttcggcaagaaagttgagagctca
gttttgggctcgttaagctctggctctctaactgggttttccttctctcccggaaacact
agtttatttggtaaagatgctgcccagagtacagcagcctcttcaccattctctgctaaa
gcatccgagaaccaagcaggaggcagcagcagagatggtgaagaagaagagaacgatgag
ccacccaaggtggtggtgactgaagtgaaggaagaggatgctttctactccaaaaaatgt
aaactattttacaagaaagacaatgaatttaaagagaagggtgtagggactctgcattta
aaacccacagcaactcagaagacccagctcttggtgcgagcagacaccaacctaggcaac
atactgctgaatgttctggttccacccaatatgccgtgcacacgaacagggaaaaacaac
gtccttatcgtctgtgtccccaaccccccacttgatgagaagcagcccgctctgccggcc
accatgctgattcgggtgaagacgagcgaggatgccgatgaactgcacaagattttactg
cagaaaaaggatgcctga
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integrated database retrieval system
