Mastomys coucha (southern multimammate mouse): 116077233
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Entry
116077233 CDS
T07224
Name
(RefSeq) ATP-binding cassette sub-family A member 8-A
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116077233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116077233
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
116077233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
MMR_HSR1
AAA_23
nSTAND_NTPase5
Rad17
nSTAND1
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
116077233
NCBI-ProteinID:
XP_031207483
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MVKREINVCQQTWALLCKNLLRKKRLKRDTFLEFLYTALILFSLTLFLELHEVYDFSSLP
DVDLGRIDSFNDSTTFTIAYTPVTPTTQRIMDTVSLVSYMAGRKILAFPNEENMTELTSI
RYDDVVRVIFTSAYSYHLKFMAGTRIPVTKEHQDHTAHCFSYDETIYCGLSRFWTHGFVA
LQAAINAAIIEVTTNHSVMEEMMSLTGKYIKIDTFIGQEGTMTDYFLFFCIICFSPLTYY
ISAGVTRERKKMKGLMTVMGLRDSAFWLSWGLLYGVIIFVVTLLLTFIVKLVQFVFLTGF
MVIFLLFFFYGLSLVSLSFLMSVLLRKTFLTDLMVFFLTVSCGSLGFTALYRYLPVSLEW
LLSLLSPFAFMLGMTQLLRLDYDVNSNADPMGNPNVVIGTIFMLFFDGVFYLMLTFYFEK
VLPNEYGRRQSPLFFLKSSFWSGQNPADRTALDNETDYEFSDDSFEPVSTEFHGKEAIRI
RNLTKDYIQKSKRTEALKDLTLDVYKGQITAILGHSGAGKSTLLNVLSGLCVPTKGWVTI
HNNKLSEMTDLENISKLTGVCPQCNVQFDFLTVRENLRLFAKIKGIQAHEVDNEVQRVLL
ELEMKNIQDILVQNLSGGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWNFLKER
KADRVVLFSTQFMDEADILADRKVFISKGKLKCAGSSLFLKKKWGIGYHLSLQLSESCVH
ERITSLVKQHIPDSKLLAESEGKLNYILPLERTNKFPDLYRDLERCPDLGIENYGVSITT
LTEVFLKLEGKSAIDQSDIGVTEDVQARGARGPGRHADMEQLVSLLNEMSKTKGGMALWW
QQLCAVTRLRFLKIKFERKSIVILILILGIGLLHILSANVHRIVHQSDYCWELAPHMYFL
TPGQQPHVPLTNLLIINKTGAKIDDFIHSLERQNIALEVDAFGTRNGTEDSQYNGAIILS
GGEKNYNFTLACNTKRLNCFPVLVDIVSNGLLGLFTPSAHIQTDRSTFPEDNGHNTFDYM
VHFFAWILVMACLPPYISMTSIDDYKNRAQFQLWISGLSPSAYWFGQALFEVPVYWALIF
PMCIAFYASAPPKSKFTVGDLFIQSLYVGGYAMSMIFMTYVISFIYRKGKKNSGIWSLCF
FIASFFSVFFMLIDYFRDTSLFCSIALIPPATLGGCTLLQFENSEYPEIIYEQERKYSYL
LFLTPFFHFAIFLVILRCLERKFGMKRMRMDPVFRISSRSDRVFNNPEDPEGEDEDVSLE
RVWTANALTSADFQEKPAIIASCLRKEYKGKKKCFVLKGKKKIATRNISFCVRKGEVVGL
LGHNGAGKSTSIKMITGETKPSAGQVLLKGSSPGGTPEFLGYCPQENALWLNLTVREHLE
IFAAIKGMRKSDADVAIARLADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSVVLL
DEPSTGMDPEGQQQMWQAIQATFANTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGS
IQHLKSKFGKEYLLEMKVKTPTQVEPLNTEILRLFPQAARQERYSSLMVYKLPREDVQPL
SQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDGFEEELDPSVKWKLLPQEEP
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggttaagagagagataaatgtgtgccaacaaacatgggccttattgtgcaagaatctt
ctcagaaaaaaaaggctgaaaagagacacatttttggaattcctatacacggcccttata
ctatttagtttaactttatttcttgaattgcatgaagtttatgatttttcatcactgcct
gatgtggacctgggacgcattgattcatttaatgactccaccacctttacaattgcgtac
acacccgtcaccccaacaacgcagaggataatggatacagtctctttggtctcttacatg
gcaggaagaaaaatattggcttttccaaatgaagaaaatatgacagaactcacttcaata
cgatatgatgacgtagtgagggtcatattcaccagcgcttactcctaccatttgaagttc
atggcaggaacaaggatcccagtcacaaaggaacatcaggaccacacagcacattgtttc
tcatatgacgagaccatttattgtggcctttcaagattctggacccatgggtttgtggct
cttcaagctgccattaatgctgccatcatagaagtcacaacaaatcactcagtcatggaa
gagatgatgtcacttactggaaaatacatcaagatagatactttcattgggcaagaggga
acaatgacagactacttcctttttttctgtatcatttgtttttccccacttacctactat
atctccgctggtgttacaagagaaaggaaaaagatgaagggattgatgacagtaatgggc
cttcgggattcagcattctggctgtcctgggggttgctctatggagtcattatcttcgtt
gtgacccttctcttgacatttattgtaaaattggtccaatttgtctttttgactggattt
atggtgatcttccttctctttttcttctatggcttatctctggtctctttgtctttccta
atgagtgtcttactaaggaagacgttcctcactgacctgatggtgttctttctcactgtt
tcctgcggaagtcttggattcacagcattgtacagataccttcctgtatccttggagtgg
cttctaagtttgctcagcccctttgcctttatgcttgggatgacccagctcttacgcttg
gattatgatgtgaattcaaatgcagatcccatgggcaacccaaatgtagtcattggtaca
atcttcatgctgttttttgatggtgtcttctacctgatgttgacattctactttgaaaag
gttttaccaaatgaatacggacgccgacagtcacccttgtttttcctgaagtcctcattt
tggtcaggacaaaatccagcagatcggacagcccttgacaatgaaacggactatgagttt
tctgatgactcttttgaaccagtgtctacagaattccacgggaaggaagccatcagaatc
aggaatcttacaaaagactacatacagaagtctaagcgcacagaggctttgaaagatctg
acactggatgtttataaaggccagattactgcaatccttggtcacagtggcgctgggaaa
tcaacactgttaaatgtcctcagtgggttgtgtgttcccaccaaaggttgggtcactatc
cataataacaaactctcagaaatgactgacttggaaaatatcagcaagctcactggagtt
tgtccacaatgcaatgtgcaatttgacttcctcaccgtacgagaaaatcttaggctattt
gctaaaataaaagggattcaagcacatgaagtggataacgaggtacaaagagttttgctg
gagctggagatgaaaaatattcaggatattcttgttcaaaacctaagtggtggacagaag
agaaaactgacatttggaatcgccattttaggagaccctcaaattttcctgctggatgaa
cccactgctgggctggatcccttttcaaggcaccgggtgtggaatttcctgaaggagcgc
aaagccgaccgtgtggtcctcttcagcacgcagttcatggatgaggctgacatcctggct
gacaggaaagtgttcatctccaaggggaagctgaagtgtgcaggttcatccttgtttctg
aagaagaaatgggggattggttatcacctaagcttgcagctgagtgaatcctgtgtgcat
gaaagaataacctcacttgtcaaacagcacatcccagattccaagttgttggcagaaagc
gaagggaaactgaactacatattacccctggaaagaacaaacaaatttccagatctttat
agggatcttgagagatgcccagatttgggaattgagaactatggtgtttccataacaaca
ctgaccgaggtttttctgaaactggaaggaaaatcagcgatcgaccagtcagatattggt
gtgacagaagatgtacaagctagaggggctagaggcccagggagacatgctgacatggaa
caacttgtctctttacttaatgagatgagtaagacaaaagggggcatggctctctggtgg
cagcaactctgtgcagtgaccaggcttcgtttcttgaagataaagtttgaaaggaaatcc
attgttattcttattctgattttgggaattggacttctgcatattttgtcagcaaatgtt
cacaggatagtccatcaaagtgactactgttgggagctcgctcctcatatgtacttcctc
acccctggccaacaaccacacgtgcccctcacgaacttactgatcatcaacaaaacagga
gcaaagattgatgacttcatacattcactggaacgacagaacatagctttggaagttgat
gcctttgggactagaaatggcacagaggacagtcagtataatggagctatcatcctatca
ggtggtgagaagaattacaactttacattagcatgcaataccaagcgactgaattgtttc
ccggttctggtggacattgtgagtaatggactacttggactgttcacaccatcagcacac
attcaaactgaccgtagcacatttcctgaggataatggccacaacacatttgattatatg
gttcatttcttcgcatggatccttgtgatggcctgtcttcctccttatatttccatgacc
agcattgatgactataagaacagagctcagttccagctgtggatttcagggctctcccca
tctgcatactggttcgggcaggctctgtttgaagtcccagtgtactgggcactcattttt
cctatgtgcattgcattctatgcctcggcccccccaaagagtaagttcacagttggagat
ctgtttattcagagtctctatgttggtggctatgccatgtcgatgattttcatgacttat
gtgatttcattcatttatcgcaaggggaaaaaaaatagtggcatttggtcactttgcttc
tttattgcctctttcttctctgtgttttttatgcttattgattactttagagatacttca
ctgttttgttctattgccctgattccacctgctacactgggaggctgcacattattacag
tttgagaatagtgaatatcctgaaataatttatgaacaagaaaggaagtattcctatctt
cttttcctaactcctttctttcattttgccatcttcctagttattctccgatgtctggaa
aggaagttcggaatgaaaagaatgagaatggatcctgtctttagaatttcttcaagaagt
gatcgtgtatttaacaatccagaagacccagaaggggaagatgaagatgtgagtctggaa
agagtgtggacagcaaatgctttgacttcagcggacttccaggagaagccagccatcatt
gccagctgccttcgcaaggagtacaagggaaagaagaaatgcttcgttcttaagggcaag
aagaagatcgccacaagaaacatctctttttgtgttcgaaaaggtgaggttgtaggctta
ctgggacacaatggagctggtaaaagcacatccattaagatgataactggagaaaccaag
ccaagcgctggacaggtgctgctgaaggggagcagcccagggggcaccccggagttccta
gggtactgtcctcaggaaaacgctctgtggctcaacctgacagtgagggaacatctggag
atatttgcagccataaaggggatgagaaaaagtgatgctgatgtggccattgcaaggttg
gcggatgcgctcaagctgcaggaccagctgaagtctccggtgaagacactgtcagaggga
gtgaagagaaagctgtgctttgtgctgagcatcctggggaacccttctgtggtacttctg
gatgagccatccaccgggatggaccccgaggggcagcagcaaatgtggcaggctatccag
gccaccttcgcaaacacagagaggggcgccctcctgaccacccattacatggcggaggct
gaggctgtgtgtgaccgcgtggccatcatggtgtctgggaggctgagatgtattggatcc
atccaacatctaaagagcaaatttggtaaagaatatctcctggagatgaaggtgaagacc
cccacgcaggtggagccactcaacacggagatcttgaggcttttccctcaggctgctcgg
caggaaaggtactcttctctgatggtctataaactgcccagggaggatgtgcaaccttta
tcccaggccttcttcaaattagagacagttaagcagagctttgacctggaggagtacagc
ctctcacagtctaccctggagcaggtcttcctggaactctccaaggaacaggagctggat
ggttttgaagaggaacttgatccctcagtgaagtggaagctcctcccacaggaagagcct
taa
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