Mastomys coucha (southern multimammate mouse): 116077277
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Entry
116077277 CDS
T07224
Symbol
Smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04110
Cell cycle
mcoc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116077277 (Smc1b)
04114 Oocyte meiosis
116077277 (Smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116077277 (Smc1b)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116077277 (Smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
116077277 (Smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Ca_chan_IQ
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116077277
NCBI-ProteinID:
XP_031207576
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MGRLELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNLRVKN
IQELIHGAHIGKPVSSSASVTIIYIEDSGEEKTFTRIIRGGCSEFHFGDKPVSRSVYVAQ
LENIGIIVKAQNCLVFQGTVESISMKKPKERTQFFEEISTSGEFIGEYEAKKKKLQKAEE
DAQFHFNRKKNIAAERKHAKVEKEEAEHYQSLLEELKMNKIQVMLFQLYYNEEKINLLNT
ELEHMDRNLSVVKDTLSHHENIIKAKKKDYGVLTRQLQQTAKELKSVEAVLNQKRPQYIK
AKENTSHHLKKLDLSKKLITDNEKQCSKQEDGIRALVAELADLDRAWRSFEKQMEEKILH
KGRDIELENSQLDRYKELKEQVRRKVGIMTQQLEKLQWEQKAEKERLAFEKRRHGDTQGN
LKQIKEQIEEHKKRIEKLEEYTKTCMNCLEDKKQQEAALIKEIDNTKSRMSEVNEELSLI
RNELQNAGIDNHEGKRQRKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERQKVVALDGTLFLKSGVISGGSSDLK
HKALCWDEKELHSLRDKRNQLVQELKELMKMLRKETDLKQIQTLVQGTNTRLKYSQNELD
MIKKKHLATFYREQSQLQSELLNIDSQCTMLSEGINKQQQKIEEFQDKIDKVEDDIFQDF
CEEIGVENIREFENKHIKLQQENDQKRLEFEKQKTRLNIQLEYSRNQLKKKLSKIDTLKT
TIQKSREDIDNLKKTEEECLKIVEELMVKQEQVKEVLATQSSNIEKVHIQIEEERKKFLT
VDREVGKLQKEVVIIQGSLEQKLLEKHNLLLDCKVQDINISLVLGSLEDITEVELTETES
TQATADIYEKEASIQIDYSPLREDLKALQSDKEVEAHLTLLLQQVAAQENTLLKTAAPNL
RAQENLKAVRDKFQESADAFEASRKEARICRQEFEQVKRRRYDAFSQCFEHISVSIDQIY
KKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH
SFRPAPFFVLDEVDAALDNTNIGKVSGYIKEQSQEQFQMIIISLKEEFYSRADALIGVYP
EHNECMFSHVLTLDLSKYTDIEDQEGSKSHRKLRAPRVSQSPQSPQSR
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctggagctgctgctcgtggagaatttcaagtcgtggcgaggtcgccaggtc
atcggccctttcaagaggttcacctgcatcatcggccccaacggctccgggaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaacaactaatttaagagtaaaaaac
attcaagaacttattcatggagcacatattggaaaacctgtttcttcttctgcaagtgtg
acaattatatacatagaggacagtggagaagagaaaacattcacaaggattatccgaggg
gggtgctcagaatttcattttggggataaacctgtgagtcgttctgtatatgtagcccag
ttggaaaacataggcataatagtaaaagcacagaactgtctagtttttcagggaactgta
gagtcaatatccatgaaaaagcccaaagagagaacccaattttttgaagaaatcagtact
tcaggagaatttataggagaatatgaggcaaagaaaaagaagttacaaaaagctgaagaa
gatgcacaatttcattttaacaggaaaaaaaatatagctgcagaacggaagcatgcaaaa
gtagagaaagaagaggccgaacattatcaaagtctccttgaagaattgaaaatgaacaag
atacaagtgatgcttttccaactatattataatgaggaaaaaatcaatcttttaaacact
gaattagagcatatggacaggaatttaagtgttgtaaaagacactctttctcaccatgaa
aacataattaaagctaagaaaaaggattatggagtgttaactagacaactacagcaaaca
gcaaaagaactgaaatctgttgaagcagttttaaatcagaagaggccgcagtatattaaa
gctaaagaaaacacatctcaccatctaaaaaaattggatttgtctaagaaattgataaca
gacaatgaaaaacaatgttctaagcaggaagatggcatacgagccttagtggcagaactg
gctgatttagatagagcatggagaagttttgaaaagcagatggaagagaaaatcttacac
aaagggcgagacattgaattggaaaatagtcagctggatcgttacaaagagcttaaggag
caagtcagacggaaggtaggtataatgacgcaacaactggaaaaactgcagtgggaacag
aaggcagaaaaagaaagactggcatttgaaaagaggaggcatggagacactcagggaaat
ctaaaacaaataaaagagcaaatagaagagcataaaaaacgaatagagaaattggaggaa
tatacaaagacatgcatgaattgcttggaagataaaaaacagcaagaagcagccctgata
aaagaaattgacaatacaaaatcaagaatgtctgaagttaatgaagaattgagtcttatt
agaaatgaattgcagaatgctggaattgataaccatgagggaaaacgtcaacgaaaaaga
gcagaagttctggaacaccttaaaagactttacccagattctgtgtttggaagactgctt
gatctgtgtcatcctattcataagaaataccagctggctgtgactaaggtttttggacgg
tacatggttgccattgttgtagcctcagaaaaggtagcaaaagattgtattcgatttctg
aaagaggaaagagctgaacctgagacatttcttgctctagattaccttgatatcaagcca
atcaatgaacgactaagggaaattaagggctgtaagatgatgattgatgttataaagacc
cagtttcctcagctgaagaaagtgattcagtttgtttgtggaaatggccttgtctgtgag
actgtggaagaagcaagacatattgcattcggtggacctgaaagacagaaggtagtagct
cttgatggaacactgtttttgaaatctggagtgatctctggagggtcaagtgacttaaag
cacaaagctctgtgctgggatgagaaagagttacacagtctaagagacaaaagaaaccaa
ctagtccaagagctaaaggagttaatgaagatgctccgcaaggaaacagatttgaaacaa
atacagactttagtacaaggaaccaatacacgactcaaatattcacaaaatgaactagac
atgattaaaaagaagcaccttgctacattttaccgggaacaatctcagctacaaagtgaa
ttactgaatattgattctcaatgtactatgttgagtgaaggaatcaacaaacagcaacaa
aaaattgaagaatttcaagataagatagataaggtagaagatgacatattccaagacttc
tgtgaagaaattggtgtggaaaatatccgtgaatttgagaacaaacatattaaactgcag
caagaaaatgatcaaaaaagattagagtttgaaaaacaaaaaactcggcttaatattcag
cttgaatatagtcgaaatcagcttaagaagaaactgagtaagatcgacacattaaaaaca
acaatccagaaaagcagagaagacattgataacctaaagaagaccgaagaagaatgtctg
aaaattgttgaggaactcatggtgaaacaagagcaagttaaagaagtgcttgccacacag
agttccaacattgaaaaagttcatattcaaattgaagaggaacgcaagaagtttttgact
gttgatagggaagttggaaaattacagaaggaagttgtaatcattcagggttctttggaa
cagaaactgctagagaaacataacttgctgctggattgcaaagttcaagacattaacata
agtcttgtgctggggtcattggaggacatcactgaagtggagctaactgaaacagaaagt
acccaggcaacagctgatatctatgaaaaagaagcatccatccaaatagactacagccct
ctaagggaggatttgaaggctcttcaatcagataaggaggtggaggcccaccttacactc
cttctacagcaagtagcagcccaagaaaacactctactgaagactgcagctccaaacctt
cgagcacaggagaacttaaaggctgtcagagacaagtttcaagaatctgcagatgctttt
gaggccagcagaaaggaagccagaatatgtaggcaagagtttgaacaggtgaaaagacgg
aggtacgatgctttcagtcaatgttttgagcacatctcagtctcaattgatcaaatctac
aagaagctctgcaggaacaacagtgcccaggcatttcttagcccagagaaccctgaagaa
ccttacttagatggaattagctataattgtgtggctccagggaaacggttcatgcccatg
gacaacttgtcagggggagaaaagtgtgtggctgctttggctctactatttgctgtacac
agttttcggcctgcaccattctttgttttagatgaagtagatgcagcactggacaatact
aacattggcaaagtctccggttacatcaaagagcagagtcaggaacagtttcagatgatc
attatttccctgaaagaggagttctactccagagctgatgccctgataggtgtctaccca
gagcacaatgagtgcatgttcagccatgtgttgactctggacctttccaagtatacagac
attgaagaccaagaaggcagcaagagccaccggaagctcagagcaccgcgagtatcacag
tccccgcagtctccccagtctcgttag
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