Mastomys coucha (southern multimammate mouse): 116077806
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Entry
116077806 CDS
T07224
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116077806 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcoc04054
]
116077806 (Dhx58)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116077806 (Dhx58)
Pattern recognition receptors [BR:
mcoc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
116077806 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
Terminase_6N
CATASP
At4g08330
DUF5125
Motif
Other DBs
NCBI-GeneID:
116077806
NCBI-ProteinID:
XP_031208470
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MELRPYQWEVILPALEGKNIIVWLPTGAGKTRAAAFVAKRHLETVDRGKVVVLVNRVHLV
NQHAEEFRRMLDKRWTITTLSGDMGSRAGFGLMARSHDLLICTAELLQLALNSSEEDEHV
ELTEFSLIVVDECHHTHKDTVYNTILSRYLEHKLKKAKPLPQVLGLTASPGTGGATKLQG
AIDHILQLCANLDTCHIMSPKNFYSQLLTHNPKPCKQYDLCQRRTQDPFGDLLKKLMNQI
HQQLEMPNLKQQFGTQMYEQQVVQLCKDAAEAGLQEQRVYALHLRRYNDALFIHDTVRAQ
DALDMLQDFYDKERTTKTQMVRAESWLLELFDDHKNVLAQLAAQGPENPKLEMLEGILLK
QFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQAVDIKPQMLIGAGNTGQSTHMTQKDQ
QEVIQEFRDGILNLLVATSVAEEGLDIAQCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FLATEGSREIQRELTNEALEVLMEKAVAAVQKMDPDEFKTKIQDLQRASLVKRAARAAHR
ESQQGQFLPERVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPNFSVYYTTSQNPVVINKV
FKDWRPGGTIRCNNCGEVWGFQMIYKSVTLPVLKIKSMLLETPRGKIQAKKWSRVPFSVP
VFNILQDCTQSLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcggccctaccagtgggaagtgatcttacctgctctagagggcaagaatatc
attgtatggctgcccacgggtgccgggaagacccgggcagctgcctttgtggccaagagg
catctagagacagtagacagaggcaaggtggtggtactggtcaatagggtgcacttggtg
aaccagcatgctgaggagttcaggcgcatgctggataaacgctggaccataacaactctg
agtggggacatggggtcccgagctggctttggcctaatggctcggagccatgacctgctc
atttgtacagcagagttgttgcagttagcactgaacagctctgaggaggacgagcacgta
gagctcacagaattctcgctgattgtggtggacgagtgtcaccacacccacaaggacacc
gtctacaataccatcttgagccggtacctggaacataagctgaagaaggcaaagcccctc
ccccaggtcttggggctcacagcctccccaggcactggtggggccaccaagctccaaggg
gccattgaccacatcctacagctctgtgcaaatttggatacgtgccacattatgtcacca
aagaatttctactctcagctgctgacgcataacccaaagccctgcaagcagtatgacctc
tgccaacggcgcacacaggatccttttggagacttgctaaaaaagcttatgaaccaaatc
caccaacagctagagatgcctaacttgaagcagcaatttggaacccagatgtatgagcag
caagtggtacagttgtgcaaggatgcggcagaggctgggctccaggaacagcgggtgtat
gcgctgcatttgcggcgctacaatgatgcactatttatccatgatactgtccgtgcacag
gatgctcttgacatgttgcaagatttctacgacaaagaacgcaccacaaaaacacagatg
gtgcgtgctgaaagctggctgctggagctgtttgatgaccataaaaatgtgctggcccag
ctagcagctcagggtcccgagaacccaaagttggagatgctggaagggatcctactgaag
cagtttgggagccctggccacactcggggtatcatcttcaccagaacccggcaaacggct
tcctccctcctgctctggctgcggcagcagccttgcctgcaggctgtggacatcaagcct
cagatgctgattggagcagggaacacaggccagagcacacacatgacccagaaagaccag
caagaagtgatccaggagttcagggatggtatcctgaaccttctagtggccacaagtgtg
gcagaggaggggctggatatcgctcagtgcaatgtggtggtgcgctatgggctcctgacc
aatgagatctccatggtccaggcacggggtcgtgctcgagctggtcagagtgtgtactcc
ttcctggctacagagggcagtcgggagattcagcgggagctaaccaatgaggcgctggag
gtgttgatggagaaggcagtggctgctgtacagaagatggaccctgatgagttcaagact
aagatccaggacctgcagagagcatctttagttaagcgagcagcacgtgcggcccatcgg
gagagccagcaggggcagttcctaccagagcgtgtgcaacttctctgcatcaactgcatg
gtggccgtgggctacgggagtgacctacggaaggtggagggcacccaccacgtcaatgtg
aaccccaacttctcggtctactataccacttcccagaatcctgtggtcattaacaaggtc
tttaaggactggagacctggaggaaccatcagatgcaataactgtggggaggtctggggc
ttccagatgatctacaaatcagtgaccttgccggttctcaaaatcaaaagcatgcttctg
gaaacccctcgagggaagatccaggccaaaaagtggtcccgggtacctttctcagtacct
gtcttcaacatcctgcaggactgcacccaaagcctgtctgatctctctctggactga
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integrated database retrieval system
