KEGG   Mastomys coucha (southern multimammate mouse): 116077808
Entry
116077808         CDS       T07224                                 
Symbol
Nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mcoc03009]
    116077808 (Nle1)
Ribosome biogenesis [BR:mcoc03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    116077808 (Nle1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 DSE1_N Beta-prop_Aladin ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_EML ASA1 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR41 NLE CFAP251_N PAC11 Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_NOL10_N Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_1st Tricorn_2nd RMC1_N eIF2A TRM82_WD Ge1_WD40 Beta-prop_NUP159_NUP214 PD40 Beta-prop_NWD2_C DNAI3_WD Cytochrom_D1
Other DBs
NCBI-GeneID: 116077808
NCBI-ProteinID: XP_031208475
LinkDB
Position
Unknown
AA seq 485 aa
MAAAVADNAAAGDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEEPLPL
AFYIHDAEIVSSLGKTLESQSVETEKIIDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISV
AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQI
LLWDPSTGMQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCER
ILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA
LRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE
DKKPLSRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI
AWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCL
RIWRR
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggcggcggcggtggcggacaatgcggcggcaggcgacgtgcagcggctgctcgtacag
ttccaggatgagggaggccagctgctgggctcccctttcgacgtgcccgtcgacatcacg
ccggacaagctgcagctcgtgtgcaacgcgctgctggcccaggaggagcccctgcccctt
gctttctatatccatgatgctgagattgtgtcctcgctggggaagacactggagtcccag
tctgtggagacagagaaaatcatagacatcatctaccagccccaagctgtcttcagggtc
cgcgctgtgacacggtgcaccagctcattggagggtcacagcgaagccgtcatttctgtg
gccttcagccccacgggaaagtacctggccagtggttccggagacaccactgtacgcttc
tgggatctcagcactgagacaccacatttcacatgcaaaggacaccggcactgggtcctt
agcatatcctggtccccagacggcaagaaactggcctcaggctgcaagaatggccagatt
ctcctgtgggacccaagcacggggatgcaggtgggcaggaccctcacaggccacagcaag
tggatcacaggcctgagctgggagccccttcacatgaaccccgagtgccgctacgtggcc
agcagctccaaagacggcagcgtacgagtctgggatacaactgcaggccgctgtgaacgc
atcctcaccgggcacacacagtcagtcacctgcctccgatggggaggagatgggcttcta
tattctgcttcccaggaccgcaccatcaaagtctggagggcccatgatggtgtgctgtgc
cgtactcttcaaggtcatggccactgggtgaacaccatggcacttagcacagactatgcc
ctgcgcacaggggcctttgagcccgctgaagccacagtgaatgcccaagaccttcagggg
tccttgaaggagctgaaggagagggcatcaagccgctataaccttgtgcggggccaaggc
ccagagaggctggtctctggctcagacgacttcaccttattcctgtggtctccagcagag
gacaagaagcccctctcccggatgacaggacaccaggccctcatcaaccaagtgctcttc
tctcctgactctcgaatcgtggccagtgcctccttcgacaagtctatcaagctgtgggat
ggcaggacgggcaagtacctagcttccctgcgtggccacgtggccgctgtgtaccagatt
gcctggtcagctgacagccgattgctggtcagtggcagcagcgacagcacgctgaaggtg
tgggatgtgaaggcccagaaactggccacagacctgcctggccatgccgatgaggtgtat
gctgttgactggagtccagatggccagagagtagcaagcggcgggaaagacaagtgcctc
cggatatggagaagatga

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