Mastomys coucha (southern multimammate mouse): 116077982
Help
Entry
116077982 CDS
T07224
Symbol
Cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52 isoform X1
KO
K24728
cilia- and flagella-associated protein 52
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116077982 (Cfap52)
Cilium and associated proteins [BR:
mcoc03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
116077982 (Cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_NOL10_N
WD40_CFAP43
Beta-prop_VPS8
DUF7082
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
116077982
NCBI-ProteinID:
XP_031208748
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MEEKVLPELDVGELELEAVIGFNGHVPNGLKCHPDQEHLIYPLGCTVLIQAINTNEQNFL
HGHGNNVSCVTISKNGDYIASGQVTFMGFKADIILWDFKKRELIARLSLHKGKIEALAFS
PNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATNVVFSRCRDEMFVTAGNG
TIRVWELDLPNRKIWPTECQTGQMKRIVLCTGMADDDSFFYLGTTTGDILKMNPRTKLLA
DTGPMKDKFSLGVSALRCLKMGGLLIGSGAGLLIFCKSPSYKPIKKIQLQGGITSITLRG
EGHQFFVGTEESHIYRVNFTDFKETLIATCHFEAVQDIVFPFGTAELFATCAKTDIRVWH
TISKRELLRITVPNMTCHGIDFMRDGKSIISAWDDGKIRAFAPESGRLMYTISSAHRIGV
TAIATTSDCKRIISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTAS
TDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGSVIREL
EGSLSGSINGMDITQEGGHFVTGGHDHLVKVWDYNEGEVTHVGVGHSGNILGMRISPGNQ
YIVSVSADGAILRWKYPFAS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaagttttacctgagctggacgtaggcgaactggagcttgaggctgtgatc
ggcttcaatggacacgttcccaatggtctcaaatgccatcctgaccaggagcacctgatc
tatcccctgggttgcactgtccttatccaggcaataaatactaatgagcagaatttccta
catggccatggtaacaacgtctcctgtgtgaccatctccaagaacggagactatattgcc
tctggacaagtcacattcatgggtttcaaggcagacatcatcctgtgggactttaagaag
agggagctgattgctcgcctgtcactccacaagggcaaaattgaagccctggccttttcg
cccaatgatttgtacttggtttcacttggtggcccagatgatggaagtgtggtggtttgg
agtatagccaagagagatgccatttgtggcagccccgcggcaggcctcaatgtcggcaat
gccaccaacgtggtcttctctaggtgccgagatgaaatgtttgtcactgctggaaatggg
acaattcgagtgtgggaactggatcttccaaatagaaaaatctggccaaccgagtgccaa
acaggacagatgaaaaggatagtcctgtgtactggaatggccgacgatgacagctttttc
taccttggcaccacaactggggatattctcaaaatgaaccccaggaccaaactgctggca
gacactgggcctatgaaggacaaattcagcttgggagtgtcggctctcaggtgcctgaag
atgggcggcttgttgattggctctggagctggcttgctgatcttctgtaaaagccccagc
tacaaacctatcaagaaaatccagctgcaaggtggcatcacctctatcacactccgggga
gaagggcaccagttttttgtaggaacagaagaatcacacatctaccgcgttaacttcact
gatttcaaagagactctcattgcaacttgtcactttgaagctgtccaggacattgtcttc
ccatttggtactgctgagctgtttgcgacctgtgccaagacagacatcagggtgtggcac
accatatccaaacgggagctgctgcggatcaccgtgcccaacatgacctgccatggcatc
gacttcatgagagacgggaagagcatcatctcagcatgggatgatggaaaaatcagagcc
tttgctccagagtcaggtcggctgatgtacaccattagcagtgctcacaggatcggagtg
acggccattgctaccaccagtgactgcaaaaggatcatcagcggtggaggagaaggggag
gtgagggtgtggcagataggctgccagacccagaagctggaggaggccctgaaggagcac
aagtcttctgtgtcctgtatcagggtgaagaagaacaacgaggagtgtgtcactgccagc
accgacgggacatgcattatttgggaccttgtgcgacttagaaggaatcagatgatcctg
gccaacaccctattccagtgtgtttgttaccacccggaagaattccagatcatcaccagc
ggcacggacaggaagattgcttactgggaagtatttgatggttcagtaatcagagagttg
gaaggttccttgtcggggtccatcaatggtatggatatcactcaggaaggaggacacttt
gttacaggtggacatgaccatctggtcaaagtctgggactacaatgagggtgaagtgact
cacgtcggggtggggcacagcggcaacatcttgggcatgcggataagtccaggaaaccag
tatatcgtcagcgtgagtgcagatggagccatcttgaggtggaaatacccatttgcttca
tga
DBGET
integrated database retrieval system
