Mastomys coucha (southern multimammate mouse): 116078073
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Entry
116078073 CDS
T07224
Symbol
Utp6
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116078073 (Utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcoc03009
]
116078073 (Utp6)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116078073 (Utp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
116078073
NCBI-ProteinID:
XP_031208880
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All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAEIIQERIEDRIPELEQLERIGLFSHAEIKAIIKKASDLEYKIHRRTLLKEDFINYVQY
EINLLELIQRRRARIKYSFKKDEIEYSMVHRVQGVFGRASAKWKDDVQLWLSYIVFCKKW
GTKAHLSKIFSAMLAIHSNKPALWIMAAKWEMEDRLSSESARQLFLRALRFHPECPKLYQ
EYFRMELMHAEKLRKEKQEFEKAAMDMGSFDHPEEILKGELARIIYKNSISKIKGAEFHV
SLLAIAQLFDFAKDLQKEIYDDLQTLHTDDPLTWDYVARRELEIESQPGEEQPVTKQAKA
VEVGHREERCCAVYEEAVKTLPTEAMWKCYITFCLERFSKKTTSGFLMGRLLNLLSEILF
MCISLCLXFCFXVALYSVLCLSXIDLLLRQDLFKEALQVAEAGTELFKDSVTMWQTKLQV
LIDSKSPDVAMCFEEAFAHLKPQVCLPLWISWTEWSESAKSQEDTEAIFKKAILAVTGAS
SVTLKEKYLDWAYRSGGYKKARAVFKSLQESRPFSVEFFRKMMQFEKEQESCKMANLREY
YERALREFGSADSDLWMDYIKEELNHPFGRPENCGQIYWRAMKMLQGQSAELFVAKHAMH
QAGH
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggagataattcaggaacgcatagaagatcgaatcccggagttggaacagctggag
cgcatcggactcttcagtcacgcggagattaaggctatcatcaagaaggcttctgaccta
gaatacaaaatacatcggagaacccttctcaaggaagactttatcaactatgttcaatat
gaaattaatcttttggagctgatccagagaagaagagcaagaattaaatattcatttaag
aaggatgagatcgaatattctatggtacatcgggtacaaggtgtctttggtcgtgcttca
gcgaagtggaaagatgatgttcaactttggctatcctatatagttttttgtaagaaatgg
ggtaccaaagctcatcttagcaagatattctctgccatgcttgccattcattcaaacaag
ccagctttgtggattatggcagccaaatgggaaatggaagatcgcttgtcttcagagagt
gccaggcagttatttcttcgggctctacgctttcatcccgaatgtccaaagctctatcaa
gaatactttaggatggagctgatgcatgctgagaaactgagaaaggaaaagcaagagttt
gaaaaagccgccatggatatggggagtttcgatcatcctgaagaaatccttaaaggcgag
ttggcacggatcatttacaaaaattctataagcaagattaaaggtgcggaattccatgtg
tcactccttgctattgctcagctatttgattttgccaaagatctacagaaggaaatttat
gatgaccttcaaactctgcacactgatgacccactcacttgggattatgtggcgcggcga
gaattagagatcgagtcccaaccaggtgaagaacagcctgtaacaaaacaagccaaagca
gtggaagtgggccacagagaagaacggtgctgcgcagtgtatgaagaagcagtgaagacc
ctgcctacggaggccatgtggaagtgttacatcaccttttgcttggagaggttttctaag
aagaccacgtctggttttctcatgggaaggctgttaaacttactgtcagaaatactcttt
atgtgcatctctctatgtctgtaattttgcttttgagtggcgctttacagtgtgctttgc
ctttcttagattgacttgttgctgcgccaggaccttttcaaagaagctctgcaggtggca
gaagctggcactgaattgttcaaggactctgtaacgatgtggcagacgaagctccaggtg
ctcattgactccaagagcccggatgtagcgatgtgctttgaggaggcctttgcacacctc
aaaccccaggtttgtctgcccttgtggatttcttggacagagtggagtgaaagtgctaaa
agccaggaggacacagaagccatctttaagaaagctattttggctgtcacaggggccagt
tcagtaactctgaaggagaaatacctggattgggcttatcggagtggaggctacaaaaag
gccagagcagtgtttaaaagtttacaggaaagccgtccattttcagttgagtttttcagg
aaaatgatgcagtttgaaaaggagcaggaatcctgcaagatggcgaacctgagggagtat
tacgagagggcgttgcgagagtttgggtctgcagattctgatctttggatggattacatc
aaggaagaattgaaccatcccttcggtagacctgagaactgcggacagatctattggcga
gccatgaaaatgttgcagggacagtcagcagagctgtttgtagctaaacatgccatgcat
caggctggccactag
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