Mastomys coucha (southern multimammate mouse): 116078149
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Entry
116078149 CDS
T07224
Symbol
Alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
mcoc03040
Spliceosome
mcoc05014
Amyotrophic lateral sclerosis
mcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116078149 (Alyref)
09122 Translation
03013 Nucleocytoplasmic transport
116078149 (Alyref)
03015 mRNA surveillance pathway
116078149 (Alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116078149 (Alyref)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116078149 (Alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116078149 (Alyref)
03041 Spliceosome [BR:
mcoc03041
]
116078149 (Alyref)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116078149 (Alyref)
TREX complex
116078149 (Alyref)
Spliceosome [BR:
mcoc03041
]
Complex C
Other components
EJC/TREX
116078149 (Alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116078149 (Alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116078149
NCBI-ProteinID:
XP_031209001
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGAAQAAARVNRGGGPMRNRPA
IARGAAGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIDTQRRPAQSINRGGMTRNRGSGGFGGGGTRRGTRGGSRGRGRGTGRNSKQQLSAEE
LDAQLDAYNARMDTS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggaggccgcggcgggggccggggtcgcggcagggcgggctcccagggcggccgcggcggc
gcagcgcaggccgcggcgcgcgtgaatcgaggcggcgggcctatgaggaaccggcccgcc
atcgcccgcggcgccgcaggcggcggcaggaaccggccggcaccctacagcagaccgaaa
caacttcccgacaagtggcagcacgacctcttcgacagcggcttcgggggtggcgccggc
gtggagacggggggcaaactgcttgtgtcaaacctggacttcggagtgtcagatgcggat
atccaggagctctttgctgaatttggaacattgaaaaaagccgctgtgcactatgatcgc
tctggacgaagtttagggaccgcagatgtgcactttgaacggaaagcagatgccctgaag
gctatgaaacagtacaatggtgtccctttggatggccgccctatgaacatccagcttgtc
acatcacagattgatacacagcgaagacctgcacaaagcataaacagaggcggcatgaca
agaaaccgtggctctggaggttttggtggtggtggcaccaggagagggacacgtggaggc
agccggggaagaggtagaggcaccggcaggaactcaaagcagcagctttctgcagaggaa
ttggatgcacagctggatgcttataatgcaaggatggacaccagctaa
DBGET
integrated database retrieval system
