Mastomys coucha (southern multimammate mouse): 116078169
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Entry
116078169 CDS
T07224
Symbol
Grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04020
Calcium signaling pathway
mcoc04024
cAMP signaling pathway
mcoc04080
Neuroactive ligand-receptor interaction
mcoc04082
Neuroactive ligand signaling
mcoc04713
Circadian entrainment
mcoc04720
Long-term potentiation
mcoc04724
Glutamatergic synapse
mcoc05010
Alzheimer disease
mcoc05014
Amyotrophic lateral sclerosis
mcoc05017
Spinocerebellar ataxia
mcoc05020
Prion disease
mcoc05022
Pathways of neurodegeneration - multiple diseases
mcoc05030
Cocaine addiction
mcoc05031
Amphetamine addiction
mcoc05033
Nicotine addiction
mcoc05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116078169 (Grin2c)
04024 cAMP signaling pathway
116078169 (Grin2c)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116078169 (Grin2c)
04082 Neuroactive ligand signaling
116078169 (Grin2c)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
116078169 (Grin2c)
04720 Long-term potentiation
116078169 (Grin2c)
09159 Environmental adaptation
04713 Circadian entrainment
116078169 (Grin2c)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116078169 (Grin2c)
05014 Amyotrophic lateral sclerosis
116078169 (Grin2c)
05017 Spinocerebellar ataxia
116078169 (Grin2c)
05020 Prion disease
116078169 (Grin2c)
05022 Pathways of neurodegeneration - multiple diseases
116078169 (Grin2c)
09165 Substance dependence
05030 Cocaine addiction
116078169 (Grin2c)
05031 Amphetamine addiction
116078169 (Grin2c)
05033 Nicotine addiction
116078169 (Grin2c)
05034 Alcoholism
116078169 (Grin2c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116078169 (Grin2c)
Ion channels [BR:
mcoc04040
]
Ligand-gated channels
Glutamate (ionotropic)
116078169 (Grin2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
DUF63
Motif
Other DBs
NCBI-GeneID:
116078169
NCBI-ProteinID:
XP_031209040
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MGGALGPALLLTSLLGAWAGLGAGQGEQAVTVAVVFGSSGPLQAQARTRLTPQNFLDLPL
EIQPLTVGVNNTNPSSILTQICGLLGAARVHGIVFEDNVDTEAVAQLLDFVSSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYRRQYGTLPAPAGDCRSHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLYMKYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSGDVTPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTNG
KHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGT
VSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKSGGPSFTIGK
SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS
GLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKMG
KLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFL
GDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYW
KLRHSVPSSSQLDFLLAFSRGIYSCFNGVQSLPSPARPPSPDLTAGSAQANVLKMLQAAR
DMVSTADVSGSLDRATRTIENWGNNRRAPAPTTSGPRSSTPGPPGQPSPSGWGPPGGGRT
PLTRRAPQPPARPATCAGSPLPNVSRASCRHAWDARWPAQVGHQGSHLSASERRALPERS
LLHAHCHYSSFPRAERSGRPFLPLFPEPPEPDDLPLLGPEQLARREALLRAAWARGPRPR
HASLPSSVAEAFTQSNPLPARCTGHACACPCPQSRPFCRHVAQAQSLRLPSYREACVEGV
PAGVATWQPRQHVCLHAHTHLPFCWGTACRHPPPCASHSPWLIGTWEPPSHRGRTLGLGT
GYRDSGVLEEVSREACGTQGFPRSCTWRRVSSLESEV
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagccctggggccggccctgctgctcacttcactccttggtgcttgggcaggg
ctgggtgcagggcagggggaacaggccgtgactgtggcagtggtgtttggcagctctggg
ccactgcaggcccaggcccggactcgtctcaccccccagaacttcctggacctgcctctg
gagatccagccactcaccgttggggtcaacaataccaaccccagcagcatcctcacccag
atctgtggacttctgggtgctgcccgtgtccacggcatcgtctttgaggacaacgtggac
accgaggccgtggcacagctactggacttcgtctcctcccagacccacgtgcccatcctc
agcatcagcggaggctctgctgtggtcctcacccccaaggagccaggctccgccttccta
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggaatac
gactggagcgcgttcgccgtcatcaccagcctgcaccctggccacgcgctcttcctcgag
ggcgtgcgcgccgtcgccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggagctgggccccggtgggccgcgagcgcgcactcagcgcctgctgcgccaggtcgac
gcaccggtgctggtggcctactgctcccgcgaagaggccgaggtgctcttcgcggaggct
gcgcaggctggcctggtgggacccgggcacgtgtggttggtacctaacctggcgctggga
agcaccgacgctccccctgcagccttcccggtgggcctcatcagtgtggtcaccgagagt
tggcgccttagcctacgccagaaggtccgcgacggtgtggccattctggccctcggcgcc
cacagctaccgacgccagtacggtaccctgccagccccggctggagactgccgaagccac
ccgggacccgtcagccctgctagggaggccttctacaggcatctgctgaatgtcacctgg
gagggccgagacttctctttcagccctggtgggtacctggtccagcccaccatggttgtg
atcgccctcaaccggcaccgcctctgggagatggtgggacgttgggatcatggagtcctg
tacatgaagtacccagtatggcctcgctacagcacttctctgcagcctgtggtggacagc
cggcacctgacagtggccacactagaagaaaggccctttgtcattgtggagagccctgac
cctggcacaggcggctgtgttcccaacactgtgccctgccgtagacagagcaaccacacc
ttcagcggggatgtgacgccctacaccaagctctgttgtaagggcttctgcatcgacatc
cttaaaaagctggccaaagtggtcaagttctcctacgacctgtacctggtgaccaacggc
aagcacggcaagagggttcgcggtgtgtggaatggtatgataggggaggtatactacaag
agggcagacatggccatcggctccctcaccatcaatgaggagcgttctgagattatagac
ttctctgtgccttttgtggagaccggcatcagcgtaatggtggcacggagcaacggcacc
gtctccccctcagcttttctggaaccctacagccctgccgtgtgggtgatgatgtttgta
atgtgcctcacggtggttgccatcactgtcttcatgttcgagtacttcagtcctgtcagc
tacaaccagaacctcaccaagggcaagaagtcaggtggaccatccttcaccattggcaag
tccgtgtggttgctgtgggcactggtcttcaacaactctgttcccatcgagaacccccgt
ggtaccaccagcaagatcatggtcctggtgtgggccttcttcgctgtcatctttctcgct
agctacacggccaatctggcagccttcatgatccaggagcaatacatcgacactgtttcg
ggccttagtgacaagaagtttcagcggcctcaagaccaatacccacccttccgttttggc
acggtacctaacggcagcacagagaggaacattcgtagcaactatcgtgacatgcacacc
cacatggtcaagttcaatcagcgctccgtggaggatgctctcacaagcctgaagatgggg
aagctggatgccttcatctacgatgccgccgtcctcaactacatggcgggcaaggacgaa
ggttgcaagctggtcaccattgggtctggcaaagtctttgccaccactggctatggcatt
gccatgcagaaagactcccactggaagcgggctatagacctggcgctcctgcagttccta
ggggatggagagacgcagaagttggagacagtgtggctctcggggatctgccagaatgag
aagaacgaggtgatgagcagtaagctggacatcgacaacatggcgggcgtcttctacatg
ctgttggtggccatggggctggcccttctggtctttgcctgggagcacctggtctactgg
aaacttcgacactcggtgcccagctcatcccagctggacttcctgctggctttcagcagg
ggcatctacagctgcttcaacggggtacagagccttccgagccctgcgcggccgcccagc
ccggacctcacagcaggctcagcccaggccaatgtgctgaagatgctgcaggcggctcga
gacatggtgagcaccgcggacgtgagcggctctttggaccgcgccactcgcaccatcgag
aactggggcaataaccgccgcgcgcctgctcccaccacctccggcccgcggtcatccacc
ccgggtcctccgggacaaccgagtcccagcggctgggggcctcccggtgggggccgtacc
ccgctaacacgcagggccccgcagccgccggctcgccccgcgacgtgcgcagggtcgcct
ctacccaacgtgtcccgagcatcctgcaggcacgcttgggacgcgcggtggccggcgcag
gtagggcatcagggatcgcacctctcggcctccgagcggcgcgcgctcccggagcgctcc
ctgttgcacgcgcactgccactacagctccttccctcgagcagagaggtcagggcgcccc
ttcctcccgctattcccggagcccccggagcccgacgacctgccactgctcgggccggaa
cagctggctcggcgggaggctctgctgcgcgcggcctgggcccggggtccgcgccctcgc
cacgcttccctgcccagctcggtggcagaagccttcactcaatccaaccctctgcctgcc
aggtgcaccggtcacgcctgcgcctgcccatgcccccagagccggccattctgccggcac
gtggctcaggcacagtcgttgcggctgccgtcctaccgggaggcctgtgtggagggcgtg
ccagcaggggtggccacctggcagcccagacagcacgtctgcctgcacgcccatacccac
ctgccgttctgttgggggactgcctgccgtcaccctccaccctgtgccagccacagcccc
tggctcattggaacctgggagcctccgtcacacagaggcaggaccctggggctaggtaca
ggctacagggacagtggggtgctggaagaggtgagcagggaagcctgtgggacacaaggc
tttccaaggtcctgcacctggaggcgggtctccagcctggaatcagaagtgtga
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integrated database retrieval system
