Mastomys coucha (southern multimammate mouse): 116078236
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Entry
116078236 CDS
T07224
Symbol
Pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116078236 (Pdzrn4)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116078236 (Pdzrn4)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116078236 (Pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116078236
NCBI-ProteinID:
XP_031209175
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRSAKEPIVVQVLRRTPLSR
PTYSMAPEVQLMNASTQTDITFEHIMALAKLRPLTPPVPDTCPFLLSDSCHSLHPMEHGF
YEDHEYVSSLPADADRAEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPN
SIAAKDGRIREGDRILQINGEDIQNREEAVALLSSDECKRIVLLIARPDMQLDEGWLEDE
RNEFLEELNSEILEEECTEGAQCTANELQQPKKQEEEEGTTDTATSSSNNQEKDSGVGRT
DESLRNDESSEQENAGEEPHSTPLKSKRELGQSQDTLGSIELQCNESCAGGECLDCASNQ
EVCEGFQQLLELKIRNHGDYDLYYSSSKIECNRGEQEGVEHELQLLNEELRNIELECQNI
MQAHRLQKVTDQYGDIWALHDGGFRNYNTSLDVQRGKLDDILEHPEKSDKDSSSAYNTAE
SCRSTPLTVDRSPDSSLPRMINLTNKKNLRSIMTAQQSPSRQSTREYTSTKVKTTDEGCN
VESLEKSQENSQLPDQEHTVSEHTPYLSPYHSSSYRYANIPAHARHYQSYMQLIQQKSAV
EYAQSQLSLVSMCKESPRGSEPKMEWKVKIRSDGTRYITKRPVRDRLLKERALKIKEERS
GMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLESLKESPQSSGEGKK
ELSIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaacttgtgcacttttcagaaaagagaggaacactacaaactgctgtacgaa
gtttcccaggtcaatggcaaggatctctcaaaggccacccatgaagaggcagtggaagct
tttcgaagcgccaaggagcccatagtggtccaggtattaaggcggactcccctcagccga
ccgacatacagcatggccccggaagtacaactcatgaatgccagtactcagacagacatt
acttttgaacacatcatggccctggcgaagcttcgaccactcacccctcccgtgccagac
acctgtccatttctgctttcagacagctgccattcccttcatccaatggagcatggattt
tatgaagaccacgagtacgtttccagcttgcccgcggatgcagacagagcggaagacttt
gaatatgaggaggttgagctgtgtcgtgttagcagtcaagagaagctgggcctgacagtc
tgctaccgaaccgatgatgaagaggacacgggcatttatgtcagcgaggttgacccaaat
agcatcgctgccaaggatggccggattcgagaaggggatcgtattttacaaataaatgga
gaagacatccagaaccgggaagaggctgtggctctgctctccagcgatgagtgtaagaga
attgtgctgctcatcgccaggcccgacatgcagctggatgaaggctggctggaagatgaa
aggaatgaattcttagaggagttaaactcggagatactggaggaggaatgtactgaagga
gcacagtgcacagccaatgagctgcagcagccaaagaagcaggaggaagaagaaggcaca
acagacacggccacctcctcttccaacaaccaggagaaggacagtggtgtggggcgcaca
gacgagagcttgcgaaatgatgagagttcagaacaggagaatgcaggggaggagccccac
agcacaccactgaagagcaagagagagctggggcagagccaagacaccctggggagcatt
gagcttcagtgcaatgagagctgtgccgggggtgagtgcttagactgtgccagcaaccag
gaggtgtgtgaaggattccagcagctgttggagcttaagattcgaaaccacggagattat
gacctgtactactcaagcagcaagatcgaatgcaatcgaggggaacaggaaggggtggag
cacgagctgcagctgcttaatgaggagctaagaaacattgagctagagtgccagaatatc
atgcaagctcacaggctccagaaagtgacggaccaatacggagacatctgggcattgcat
gacgggggattccgaaattacaacaccagcctggatgtgcaaagggggaaactggatgac
atcttagaacatccagaaaagtcagacaaggacagctccagtgcgtacaataccgctgag
agctgcagaagcacaccgctgactgtagacaggtccccggacagttcccttccgagaatg
atcaacctcaccaataagaaaaatctgaggagcataatgacagcccagcagtccccttcc
agacagagcaccagggaatacacatctaccaaagtcaagaccaccgatgaaggttgcaac
gtggaaagcttggagaagagtcaagaaaacagccagcttccggatcaggagcacacagtc
agtgagcacactccatacctctctccttaccacagctcctcctacagatacgccaacatt
ccggcgcacgcccggcattatcaaagctacatgcagttaattcaacagaaatctgccgtg
gagtatgcccagagtcagctcagcttggtgagtatgtgcaaagaatcaccaaggggctca
gagcccaagatggaatggaaggtaaaaattaggagtgatgggacccggtacataaccaag
aggccagtgcgagaccgacttctgaaggaacgtgccttaaagatcaaggaggagcggagt
ggcatgaccacagatgacgacacgatgagtgagatgaaaatggggcgctactggagcaag
gaggagagaaagcaacacttggtccgggccaaggagcaaaggcggcgccgagagttcatg
atgcgcagtcggctggagagtctcaaggagagcccgcagagcagcggcgaaggcaagaag
gaactgagcatcatcgaactgagccacaaaaagatgatgaagaaaagaaacaagaaaatt
ttggataactggatgacaatccaagaactgatgacccatggggccaaatccccagatggc
actagggtccacaatgcctttctgtcagtgaccaccgtatga
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integrated database retrieval system
