Mastomys coucha (southern multimammate mouse): 116078285
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Entry
116078285 CDS
T07224
Symbol
Sox30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116078285 (Sox30)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116078285 (Sox30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116078285
NCBI-ProteinID:
XP_031209223
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MERARPEPPPPTPRQPPRPTPPRPLRPAPPAQPVEAATFRAAAAERSQSPSAQAAAAIAA
VASSCGEAAAAGAQAGTRRLLQVKPEQVLLLPPGPLLPPAPDEGAASASSAQARLLQLRP
ELLLLPPQSAADGGPCRPELRPMQPRTLLVKAEKQELGAGLDLSVGSRRTAEAGPRASRA
AKLEGTGKALDGRRGDEKKAKLEAEEASRDALKGGEGRSLLAIGEGVIKTEEPDRLRDDC
RLGTDATSNGLVHSSKEAILAQQPSAFGPHQQDLRFPLTLHTVPPGARIQFQGPPPSELI
RLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAF
MVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGW
VYQPRPGKRKRFPLSVSSVFSGTTQNIISTNPTTIYPYRSPTYSVVIPGLQNTITHPVGE
APPAIQLPTPAVQRPSPITLFQPSVSNTGPVAVPPPSLTARPSLPPQRFSGPSQTDVHRL
PSGTSRSVKRPTPVPLESTNRIPAGASTAHARFATSPIQPPKEYASVSTCPRSTPIPPAT
PIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSS
MPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRSCESMDGPPYYNSHSHGG
EEYLNPMPPLDIGALENVFTAPASAPSGVQQVNVTDSDEEEEEKVLRNL
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgccgccgacgccgcgccaaccgccgcggccgacc
cctccgcgcccgttgcgccccgctccgcccgcgcagcccgtcgaggccgccaccttccgg
gccgcggccgcagagcgctcgcagtcgccgtcggcccaggccgcggccgccatcgccgcg
gtggcctcgtcgtgcggggaggccgcagcggcaggtgcgcaggccgggacgcgacgcctg
ctgcaagtgaagccggaacaggtgctgctgctgcctcccggaccgctgttacctccggct
cccgacgagggcgccgcctcagcctcgtccgcgcaggcgcgcctgctgcagctgaggccg
gagctgctgctgctgccgccgcagtccgcggccgacggaggcccctgcaggccggagctg
cgccccatgcagccccggacactgctcgtcaaggccgagaagcaggagctgggggcgggc
ttggacctgtcggtgggatcccggaggaccgcggaggccggccctagagcctcgagggct
gccaagttggaaggcaccgggaaggccctcgacggccgccgcggggatgagaagaaagcc
aagctggaggcagaggaggcctcgagggatgcgctgaaaggcggggaaggcaggagcctg
ctggccatcggagaaggagtcatcaagaccgaggagccagacagactcagggacgattgt
aggctgggcacggacgccacgtccaatggcctggtccacagcagcaaggaggccatcctg
gcccagcagcccagtgcttttgggccacaccagcaagacctaaggttcccattgactctc
cacaccgtcccacctggagcccgtatccagtttcaggggcctccgccttctgagttgata
cgattgtctaaggtccccctgacaccagtgcctattaaaatgcagtccttgctggagcct
tctgtaaaaattgaaaccaaagacgtccccctcaccgtgcttccctcagatgcaggaata
cctgatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcattt
atggtttgggcaagaatccaccgaccagcactggctaaagctaacccagccgccaacaat
gcagagatcagtgtccagctggggttagagtggaacaaacttagtgaagaacaaaagaaa
ccttactatgatgaagcacaaaagattaaagagaagcacagagaggaatttcctggttgg
gtttatcagcctcgtccagggaagcgaaaacgcttccctctaagtgtttccagtgtattt
tctggtaccacacagaatattatctctacaaatcctacaacaatttatccttatcgctca
cctacctactctgtggtaattcccggccttcagaacaccatcactcatccagttggtgaa
gccccgcctgccatccagctgcccacacctgcagtccagcgcccaagtcccatcacactt
ttccagcccagcgtctccaacactggcccggtggccgtcccgcctccaagcctgacggcc
cgcccatcactcccacctcagcgcttttctgggccttcccaaactgacgttcataggctc
ccttcgggaaccagtcgttctgtgaagagacccactccagttcctctggaaagcaccaac
aggattccagctggtgcaagtactgcccatgccagatttgcaacctcgcctatccagcct
cccaaggagtatgccagcgtttccacttgtccccgaagcactccaatacccccagctact
cccattccacactcacacgtctatcagcccccgccccttggccatccagccacactgttt
ggaacgccacctcggttctcctttcaccacccttacttcctacctggacctcattacttc
ccgtcaagcacatgcccttatagtcggcctccctttggctatggaaattttccaagttca
atgccagaatgtcttggttattatgaagacagataccaaaaacatgaggctatcttttca
gctttaaatagagactatcctttcagagactatccagatgagcacacacacagtgaagac
tctcggagctgtgagagcatggacgggcccccttactacaacagccatagccacggcggg
gaagagtacttgaatcccatgcctccactggacattggagccttggagaatgtcttcaca
gccccggcctcagccccctcaggggtccagcaagtcaatgtcactgacagcgatgaggag
gaggaagaaaaagtgctcaggaatttatag
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