Mastomys coucha (southern multimammate mouse): 116078496
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Entry
116078496 CDS
T07224
Name
(RefSeq) ATP-binding cassette sub-family A member 3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116078496
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116078496
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116078496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_22
AAA_23
RsgA_GTPase
AAA_29
MukB
AAA_27
Motif
Other DBs
NCBI-GeneID:
116078496
NCBI-ProteinID:
XP_031209603
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MAVLQQLMLLLWKNYTLKKRKVLVTILELFLPLLFSGILIWLRLKIQSENVPNATVYPDQ
SIKELPLFFSFPPPGGSWELAYVPSHSDAARTITETVKRELMIKMRVHGFSSEKDFEDYI
RYDNHSSNVLAAVVFEHSFNHSQDPLPLVVKYHLRFSYTRRNYMWTQTGNIFLKETEGWH
TNSLFPLFPSPGPREPSSPDGGEPGYIREGFLAMQHAVDKAIMCYHANASAQQLFQKLMV
ITKRFPFPPYISDPFLIAIQYQLPLLLMLSFTYTSLTIIRAVVQEKEKKLKEYMRMMGLS
SWLHWSAWFLMFFLFFLIVVSFMTLLFCVKVKKDTAVLSNSDPSLVLAFLLCFAVSSISF
SFMVSTFFSKANIAAAVGGFLYFFTYTPYFFVAPRYNWMTLSQKLLSCLLSNVAMAMGAQ
LIGKFEAKGTGIQWRDLLNPVNVDDDFCFGQVLGMLLLDSVLYGLVAWYVEAVFPGQFGV
PQPWYFFLMPSYWCGNPRTAVGKEEEGSDPEKALRNEYFEAEPEDLVAGIKIKHLSKVFQ
VGNKDKVGIRDLTLNLYEGQITVLLGHNGAGKTTTMSMLTGLFPPTSGHAYIHGYEISQD
MVQIRKSLGLCPQHDVLFDNLTVAEHLYFYAQLKGLSLQKCPEEVKQMLHILSLEDKRDL
RSKFLSGGMKRKLSIGIALIAGSKVLMLDEPTSGMDALSRRAIWDLLQQLKSDRTILLTT
HFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPYCNPEGIAQLVHHH
VPSAMLESHAGAELSFILPKESTHRFESLFAKLEKKQKELGIASFGASVTTMEEVFLRVG
KLVDTSMDIQAIQLPALQYQHERRASDWALDSNLCGVMDPTNGIGALIEEEEVLVKLNTG
FALHCQQFWAMFLKKAAYSWREWKMVAAQVLVPVTCLTLALLAINYTSEMFDDPLLKLSL
SEYGRTVVPFSVPGTSRLAQQLSEHLRDMLQAERQEPREVLGDLEEFLVFRASVEGGGFN
ERCLVATSFKDRGELTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPQASIEIANYPQP
RNILQVAKDQFNEGRKGFRIALNLLIAMAFLASTFSILAVSERAVQAKHVQFVSGVHVAT
FWLSALLWDLISFLVPSLLLLVVFQAFNVHAFTRDGHMADVLLLLMLYGWAIIPLMYLMS
FFFSAASTAYTRLTIFNILSGIATFIMVTIMRIPAVKLEELSRTLDHVFSVLPNHCVGMA
VSNFYENYETQRYCTSSELAIHYCKKYNIQYQENFYAWSTPGVGKFVTSMAASGAIYLTL
LFLIETNLLWRLRTFICAFRRRWTLAELQNRTSVLPEDQDVADERSRILVPSLDSMLDTP
LIINELSKVYDQRAPLLAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETVTSGDA
FVGGYSISSDIGKVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLIDACVENTLR
GLLLEPHANKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARA
RESGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGK
QEVLEEFKAFVDLTFPGSILEDEHQDMVRYHLPGCDLSWAKVFGILEKAKEKYGVDDYSV
SQISLEQVFLSFAHLQPPTTEDGR
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgcagcagctcatgctcctactctggaagaactatactctgaagaaacgg
aaggttctagtgacaatcttggagctcttcctgcccctgctgttttctgggatcctgatt
tggcttcgattgaagatccagtcggagaatgtgcccaatgccactgtttacccggaccag
tccatcaaggagctgcccctgtttttctcattccctccacctggggggagctgggagctc
gcctatgtcccttcccacagtgatgctgccaggaccatcacggagacagttaaaagggaa
ctcatgatcaagatgagagtgcacggcttttcctctgagaaggacttcgaggactacatt
cggtatgacaaccactcctccaatgtgctggcagctgtggtatttgagcacagcttcaac
cacagccaggaccccctgccgctggtggtgaaatatcacctgcgcttcagttacacgaga
agaaattacatgtggacccaaacaggaaatatcttcctaaaagagactgaaggctggcat
accaattcgcttttcccacttttcccaagcccaggaccaagggaaccttcatcacctgat
ggcggtgaaccagggtacatccgtgaaggcttcttggccatgcaacatgctgtagacaaa
gccatcatgtgttaccatgccaacgcctctgcacagcagctgttccagaagctcatggtg
atcaccaaaaggttcccgttcccaccatacatctcagatccattcctcattgccatccag
taccagcttcctctgctgctcatgctgagcttcacctacacctccctcaccatcatccgg
gctgtggtgcaggaaaaggagaaaaaactaaaggagtacatgcgcatgatggggctcagc
agctggctacactggagtgcttggttcctcatgttcttcctgttcttcctcattgtggtc
tccttcatgaccctcctgttctgtgtcaaagtgaagaaggacacagccgtcctttcaaac
agcgacccctccctggttctggccttcctgctgtgttttgcagtctcctccatttccttc
agcttcatggtcagcaccttcttcagtaaagccaacatagcagcagccgtgggtggcttc
ctgtacttcttcacctacaccccctactttttcgtggctcctcggtacaactggatgaca
ctgagtcaaaagctcttgtcctgtcttctatctaatgttgccatggcaatgggagcccag
ctcataggaaaatttgaagccaaaggcactggcatccagtggcgtgacctcctgaaccct
gtcaacgtagatgatgatttctgctttggacaagtgctagggatgctgctgctggactca
gtactctatgggctggtggcctggtacgtggaggctgtcttcccaggccagtttggcgta
ccccaaccctggtacttcttcctcatgccctcctactggtgtgggaacccaagaactgcc
gtagggaaggaggaggaaggcagcgacccagaaaaggctctcagaaacgagtactttgaa
gctgaaccggaggacttggtagctgggatcaaaatcaagcatctgtccaaggtgttccaa
gtgggtaataaggacaaggtgggcatcagagacctgaccctaaacctctatgaaggacag
ataacagtcctgctgggccacaacggtgctggaaagaccacgaccatgtctatgctgaca
ggtctcttcccccctaccagtggacatgcttatattcatgggtacgaaatttcccaagac
atggttcaaatccgcaagagtttgggcctgtgtccccagcatgacgtcctgtttgacaac
ctgacagttgccgaacatctttacttctatgcacagctgaaaggcctctctctccagaag
tgtcctgaagaagtcaagcagatgctgcacatccttagtctggaggacaagcgggacttg
cggtccaagttcctgagtggggggatgaagcgcaagctctccattggcatcgccctcata
gcgggttctaaggtgctgatgttagatgagcccacctcaggcatggatgccctgtccagg
agggccatctgggaccttcttcagcagctgaagagtgaccgcaccatcctgctgaccact
catttcatggacgaagctgacctgctgggagaccgcatcgccatcatggccaagggggag
ctccagtgctgtgggtcttcactgtttctcaaacagaaatacggagctggctaccacatg
acgctggtaaaagaaccgtactgcaatcctgaaggaatcgctcagctagtacaccaccat
gtccccagtgccatgctggagagccatgccggggcggagctgtccttcattcttcccaag
gagagcacacacaggtttgaaagtctgtttgctaaactggagaagaagcagaaggaactg
ggcattgccagcttcggggcctctgtcaccaccatggaggaggtcttccttcgggttggc
aagctggtggacaccagcatggacattcaagccatccagcttcctgctctgcagtaccag
catgagaggcgagcaagcgactgggccctggatagtaacttgtgtggtgtgatggaccca
acaaatggcattggagccctcatagaggaagaagaagttttggtcaagctcaacacaggg
tttgcccttcactgccagcagttctgggccatgttcctgaagaaggctgcatacagctgg
cgggaatggaagatggtagctgctcaggtcctggtccctgtgacttgcctcaccctggcc
cttctggctatcaactacacctcagagatgtttgacgaccctctcctgaagctaagcctg
agcgagtatggtagaacggttgtgcccttctcggtcccaggcacatccaggctggctcag
cagctgtctgagcatctcagagacatgctgcaggctgagaggcaggagccccgggaagtg
ctaggtgacctagaggagttcctggttttcagggcctcagtggaaggaggtggctttaat
gagcggtgcctggtagcaacatccttcaaagacagaggagagctgactgtggtcactgcc
ctgttcaacaaccaggcataccactccccagccactgccctggccatcgtggacaatctt
ctgttcaagctactgtgtggccctcaggcctccattgagatcgccaactatccccagccc
cggaacatcctgcaggtcgccaaggaccagttcaatgagggccggaaaggatttcgcatt
gccctcaatttgctcatcgccatggcatttctggccagcaccttttccatcctggccgtc
agtgagagggctgtccaggccaagcatgttcagtttgtgagcggcgtccatgtggctact
ttctggctctccgccctgctgtgggacctcatctcctttctcgttcccagtctactgctt
ctggtggtgttccaagccttcaatgtgcacgccttcacgagagatggccacatggctgac
gtgctgctgctgctcatgctgtatggctgggctatcatccccctcatgtacctcatgagc
ttcttcttctcagctgcgtccacagcttataccaggctgaccatattcaacatcctgtcg
ggcattgccaccttcatcatggtcactatcatgcgtatcccagctgtgaagttagaagaa
ctttcccgaaccttagaccatgtgttctcggtgctgccaaatcactgcgtggggatggcg
gtcagcaacttctatgagaactatgagactcagcggtactgcacttcctcagagcttgct
atccactactgcaagaagtacaacatccagtaccaggagaacttctatgcctggagcacc
ccaggtgttggcaagtttgtgacttccatggctgcctcaggagccatctacctcaccctg
ctcttcctcattgagaccaatctgctgtggcgactaagaaccttcatctgtgccttccgg
aggaggtggactctggcagaattgcagaaccggacatcagtgcttcctgaggatcaggac
gtagctgatgagaggagccgaatcctggtccctagcttggactccatgcttgacacaccg
ctgatcatcaatgagctctccaaggtgtatgaccagcgagcaccgctccttgccgtggac
aggatctcccttgcagtccagaaaggggagtgctttggcctattgggtttcaatggagct
ggaaaaaccacaacattcaaaatgctgactggggaggagacagtcacctcaggggatgcc
tttgttggtggttacagcatcagttctgatattgggaaggtacggcagcggatgggctac
tgcccccagtttgatgcactgcttgatcacatgactggcagagagatgctggtcatgtat
gcacggctccgaggcattcctgagcgtctcatcgatgcctgtgtggagaatactttgcgg
ggtctgctcctggagccacatgccaacaaactagtgaagacttacagtggtggtaacaaa
cgcaagctaagcactggcattgccctcattggagagcctgcagtcatcttcctggatgag
ccatctactggcatggatcccgtggcccggcggctactctgggatactgtagcccgggcc
cgagagtctggcaaagccattgtcatcacctcccacagtatggaggagtgtgaagccttg
tgtacccggctggccatcatggtccagggccagttcaagtgcctgggcagcccgcagcac
ctcaagagcaagtttggcagcggctactccctgcaggccaaggtccggagtgaagggaag
caagaagtactagaagagttcaaggcctttgtggacctgaccttcccaggcagcatccta
gaagatgaacaccaggacatggtccgttatcatctgcctggctgtgacctcagctgggcc
aaggtatttggtatcctggagaaggccaaggagaagtatggagtggatgattactctgtg
agccagatctccctggagcaggtctttctgagctttgcccacctgcaaccccctaccact
gaggatggacgatga
DBGET
integrated database retrieval system
