Mastomys coucha (southern multimammate mouse): 116078775
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Entry
116078775 CDS
T07224
Symbol
Rnf213
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF213
KO
K22754
E3 ubiquitin-protein ligase RNF213 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116078775 (Rnf213)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116078775 (Rnf213)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116078775 (Rnf213)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZnF_RZ-type
zf-C3HC4_3
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
116078775
NCBI-ProteinID:
XP_031209955
LinkDB
All DBs
Position
Unknown
AA seq
2899 aa
AA seq
DB search
MGTADLKNNNASVVASTPEGKTEQGEVLREEEVLLSPTDSGKELENPEELESEASWTTQM
SKKEKRRRKRQGTISSSEVPSSGLWSLDMPSSPGSHDSALPQNQAQQGGAASQPGPSLDT
ENMPMEKDGSVHTKGSGSPLQGQTAERTDAQSYLVPSDHAEVKDINTSKPSVDKGLPLEG
GPALSALESHPKMADASQKAPLPESMGEIPGQEEKVPPVDAAASLVKKAGKETGNNVQKQ
KPSSVSPAASKDRDQEVELTNKSATPVRKSNESGNTQPEDQRKPGEARNYAAVVKNKSQR
DAAPEAMSALNPGDRVTVYFHAIVSRDFGFIPDKHKVFIRGGDGLGQKGWTDACEMYYTK
DLHDLGSLIEGKMDIPRQSLDKPIPYKYVIHRGGSGKDAVEYEFIYEQAQKKGEHVNRCL
QVASALLDNGDWHQYDDIICMKASGWFQHAKDRFLDSTRKDLVRGKKQAAVVMLDRILSV
LQPWSAINLQSFMTQFRQFYSVVREPMIHDGRARKWSSLQYEEKEVRANLWEHVKKQMFP
FLEGKSGESLPADCPVRSKLTLGLSILFMVEAAGFIVPKRDLASLCYLLVPSVGSPEALH
SDLSPVLSMPQRWRLYLTNLCFRCMDEECDHWLGILPLIHCCMQQSPPIGNSKSQPEDTW
AGLENISFSEFRDKTPTRSLALQFMQGRMALLHVDEYLFRSWFSLLPLESLSSYMENSIE
YLSHVPTRVLDCFQGMSYRLRGLGKISNQNLEDVEKVFKMFLHLTDIYQHSIFGENLLQI
YLTEGLTLHETVCHITASPQFFEIPALSAKLLCELLKLSPPGVSGLSQTTVLEGLSCQDL
QKFGTLLSAVITKSWPMHSEEAVYDVDEIFKYLLTWPDVKQLFKLCGTNENIINNITEEG
RQLMATAESIFQKVAGELENGTIVVGQLELILENKSQFLDIWNLRTNENIINSITEEGRQ
LMATAESVFQKVAGELENGTIVRSHTEPAMDQMEFRSEAFQRPFQYLKRFHQKQNLDTFQ
YEEDTVEGSPEECLQHFLFYCGLINPSWSELRNFAWFLNCQLKDCEXXXXXXXXXXXXXX
GDTLRGFKNFVVSFMILMARDFATPTLHTSDESPGRHSVTIDGVAEEDLAPFSQSDTCMI
ADVLSASQRFMRERKNECGFVSLRDVERCVKVFWWFHDHSDMLLKELYNFLYESSDSTQS
FDRDPVLWSLVMAIGVCYHASLEEKASYRTAIARCFPKPYNDSKVILDEITHVQDLFLRG
APIRTNIARNLALKENVFMMVVCIELKIPLFLVGKPGSSKSLAKIIVSDAMQGQAAFSDL
FRCLKQVHLVSFQCSPHSTPQGIISTFXXXXKDLEQYVSVVVLDEVGLAEDSPKMPLKTL
HPLLEDGCIEDDPAPYKKVGFVGISNWALDPAKMNRGIFVSRGSPSEKELIESAEGICSS
DRLVQERIRGYFAPFAKAYETVCQKQDKEFFGLRDYYSLIKMVFAKAKASKRGLSPRDIA
HAVLRNFSGKDNIQALSIFTASLPEARHKEEVSTVELIKQNILSRDSRGAQSRKEIQSSV
TMVSLRGSCQHLSPSLQITTFSRLLTGSDCDVLASELRGLASKPVVLSLQQYDTEYSFLK
DVRSCLMNPGECKILVIQTDSEDGIRSAQLVASAKYVFKACPETTQGTNSHSFRKNDVTR
LQNVTISQLFKPGDQLTGDPEEDMEIETSKSGEVAEEQMEVEGSEEMQNTSDSGGCDVSH
AFVIGWGFLCSCCRHTLWKRIQDVVTPILASMISHIDRDGNLELLAQPDSPAWAQDLWMF
IYSDIKFLNIPLVLNNTRSNNEMSFILVQSHMNLFEDACNAVPFSWRIRDYLEELWVQAQ
YITDTEGLSKKFVEIFQKTLLGMFIAQFPVDQQQALLQSYLKDFLLLTMRVSSWEELRFL
QMALWSCLSELQVASGTPEEGLSLPWVHLAYQHFRTRLQNFSRILTIHPLVLSRLSQAAE
KHDLAGCEMTLDAFAAMACAEMLKGDILKPSPKAWLQLVKSLSTPLELVCSEGYFRDSGS
MTRLVIQEVRALWNCIFSIALFVEHVLLGTESQIPELSPLVTKYVFLLDKVSTGLQELLL
AASTSALELIAFFSSRFGIQPCLICHGDAQDPVCLPCDHVCCLLCIQTWLIPGQMMCPYC
LTDLPDRFSPTVSQDHRDAIEKLAQFWHMCNSFFVDLVSAMCFKDNTPPEKSLTPILLQL
QKDHLSLMDRYLVHGDEYKAVRDAMAKAVLECKTVDIGNALMACRSPKVQKTAYLLLALY
TEVAALYHPRNDRLHPEPKQLEAVNKFITESKILSAPNIRCFAKSLVDNSLPLLQTRSAN
SSLQGTVTEMAIHMATILLCGQNKVLEPLRNLAFYPVNMANAFLPTMPEDLLVHARNWKG
LENVHWYTCPNGHPCTVGECGRPMEESFCPDCHAPIGGRNHMPREGFTTIRNNEDRTQTG
HVLGNPWSSGVAETSDRGQSPVVFILTRLLTHLAMLVGVTQHPQGNPHILVLFVGVLNFN
AKLSTKGCRNNWEKHFETLLRELKHLDRTLPAINALISQDERISSNPVTKIIYGDPATFL
PHLPQKSIVHCSKIWSCRKKITVEYLQHIVEQKNGKETVPVLWHFLQKDAELRLVKFLPE
ILALQRDLVKQFQNVPEVEYSSIRGFIRSHHSDGLRKLLHDRITIFLSTWNALRRSLETN
ALYHQRSQERNLEAGADAQAVSMGSRGSRMSSRQKRGNVPMMWHLDSVMHMGDXLFLFQA
LNRCQLRHIIALWQFLSAHKSEQRLRLKKELFREIDVKYKVDLSTEHKSLLSTFLNEACL
DTFLLELHEMIVLKLRGPETESSFNPNWRLMETLVTYMDIKGSVIPLEVESQFPEKIMMS
SCIPVWKAAAMRKWERQSR
NT seq
8700 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgcagatctcaagaacaacaatgcctcggtggtggcatcaaccccagaggga
aagactgagcagggggaagtgctgagagaggaggaggtcctactctcacccaccgactct
ggcaaggaactggaaaacccagaggagctggagtccgaagcctcctggaccacccagatg
agtaaaaaggagaagaggaggaggaagagacagggcaccatttcttcctcagaggtacct
tcctctggcctctggagtctcgacatgccttcaagccctggatcccacgactcagccttg
ccccagaaccaagcccagcagggtggtgcggccagccagcctggaccttccctggacaca
gagaacatgccaatggagaaggatggctctgtgcacaccaagggcagcggcagccctctg
cagggccagacagcagaacgcacagacgctcagagctaccttgttcccagtgatcatgca
gaagtgaaggacatcaatacctctaagccctcagtggacaagggcctgcccctagagggg
ggcccagccctttctgccctcgaaagccaccctaagatggctgatgcttcccagaaggcc
ccgttacctgagtctatgggggagatacccggacaagaggaaaaagtgccgccagttgat
gctgcagccagtctggtaaagaaagctgggaaagaaacaggaaacaatgttcagaaacag
aaaccatcgtctgtgagccctgctgcctccaaggacagagaccaggaagttgaactcacc
aacaagtcggccacccctgttaggaaaagtaatgaaagcgggaacacccagccagaagat
cagcggaagccaggagaggccagaaattatgcagcagttgtgaaaaacaaaagccagcgg
gatgctgcaccagaggctatgagcgcacttaacccaggggacagagtcactgtgtacttc
catgctattgtctcccgtgactttggattcattccggacaagcacaaagtgtttatcaga
gggggagacggactcgggcagaaaggctggactgatgcttgtgagatgtactacaccaaa
gacctgcatgacctcgggtctctcatcgagggcaaaatggacattccccgacagagcctg
gacaaacccattccttataagtatgttatccatcgtggtggcagtggcaaggatgccgtg
gaatatgagttcatctatgaacaggcacaaaagaaaggagaacacgtgaaccgctgtctg
caggtcgcctctgccctgttagacaatggagactggcatcagtatgatgacataatctgc
atgaaggcctctgggtggttccagcatgccaaggaccgcttcctcgatagcacaagaaaa
gacctagtgagagggaagaagcaggctgctgtggtcatgctggaccgcatcctcagtgtg
ctccagccctggagtgccatcaacctgcagagcttcatgactcagttccggcagttttac
tccgtggtccgggagcccatgattcatgatggccgtgcaaggaaatggtccagtctgcaa
tatgaagagaaagaggtgagggcgaacctgtgggagcacgtgaaaaagcagatgttcccg
ttcctggaaggaaagagtggggagtccctgcctgccgactgccctgtgaggagtaagctc
acgttgggcctgagcatcctttttatggtggaagcagctggctttattgtacccaaaagg
gacctggcctccctgtgctatctccttgttccgagtgttggctcaccagaagccctccac
agcgacctgagccctgtcctcagcatgcctcaaagatggcgtttatacttgacaaatctg
tgcttcaggtgcatggatgaggagtgtgaccactggctgggcatcttaccgctcatccac
tgctgcatgcagcagtctccacccattgggaactctaagagccagccggaggacacctgg
gcaggcctcgaaaacatctccttttcagagtttcgggacaaaacccccaccaggagcctg
gctctccagttcatgcagggtaggatggccctgctgcatgtggatgagtacctcttccgc
tcctggttcagtttgctccctcttgaaagcttatcttcctacatggagaactccatagag
tacctgagtcacgtgcccactcgcgtcctggactgttttcaagggatgtcataccgcctt
cgagggctagggaagatctcaaaccaaaacctggaggatgtcgagaaagtctttaaaatg
tttttgcaccttacggacatttatcagcatagcatctttggggagaacctgctacagatc
tacttgactgagggtttgaccctccatgaaactgtctgccacatcacagctagcccacag
ttcttcgagattcctgccctgtctgccaagcttctctgtgaactacttaagctcagtcct
ccaggggtgagtggactttctcagaccactgtccttgaggggctctcctgccaggatctg
cagaaatttggtaccctcttatctgctgtgatcaccaagtcatggcctatgcacagtgag
gaggctgtgtatgacgtggatgagatcttcaaatacctgctcacgtggccagatgtgaag
cagctcttcaaactgtgtggaaccaatgagaacatcatcaacaacatcacggaggaaggc
aggcagctgatggccactgccgagtctatattccagaaggttgcaggggaacttgagaat
ggtaccattgtggttggacagctggagttgatcttggagaacaagagtcagtttcttgac
atctggaacttaagaaccaatgagaacatcatcaacagcatcacggaggaaggcaggcag
ctgatggccactgctgagtctgtattccagaaggttgcaggggaacttgagaatggtacc
attgtgaggagccacacagagcctgcgatggaccaaatggagttccgcagtgaagctttc
caaagacctttccagtatttaaaacggttccaccaaaagcagaacctggacacattccag
tatgaagaagacactgtggaaggctcgcctgaggagtgcttgcagcacttcctgttttac
tgtggcctcataaacccttcctggtcagagcttcggaactttgcttggtttctgaactgt
cagctcaaagactgtgagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ggagacactcttcggggcttcaagaactttgtggtgtccttcatgattttaatggccagg
gattttgccactccgactcttcacacttcagacgaaagcccaggtaggcactcggtcacc
attgatggagttgctgaagaggacctagctcccttctctcaaagtgatacttgcatgatt
gcagatgtgctctctgcctctcagagattcatgagggagaggaagaatgaatgtggtttt
gtcagcctccgggatgtggagcgctgtgtgaaagttttctggtggtttcatgaccatagt
gatatgctcttaaaggagctgtacaactttctctatgaatccagtgacagcacacagtct
tttgacagggatcctgttctctggtccctggtgatggccattggggtatgctaccatgcc
tctttagaagagaaagcgtcctaccgcacagccatcgccaggtgctttcccaagccatac
aatgacagcaaggtcatccttgatgagatcacacatgtacaggacctttttctcaggggg
gcacccataaggaccaacatagccaggaacttggctttgaaggagaatgtcttcatgatg
gtagtctgcattgagctcaagatcccccttttcctcgtggggaagcccggcagctccaaa
tcccttgccaagatcattgtgtcagatgccatgcaagggcaggctgccttctctgatctg
tttcgctgcctcaaacaggtccacctggtgtcattccagtgcagcccccattccaccccg
caaggcatcatcagcactttcnnnnnnnnnnnnaaggacctggagcagtatgtctcggtg
gtggtgctggatgaggttgggctggctgaagactcacccaaaatgcctctgaagactctg
caccccctgctggaagatgggtgcattgaagatgatcctgccccatacaaaaaagttggc
tttgttggtatttccaactgggctctagatcctgccaagatgaaccgaggaatctttgtg
tcacgaggcagtcccagtgagaaagagctcatagagagcgctgaggggatctgctcttcg
gacaggctggttcaggagagaatccgtgggtattttgcaccctttgccaaggcctatgaa
accgtgtgccagaagcaggataaggagttctttgggcttcgcgactactacagcctcatc
aagatggtctttgccaaagccaaagcttccaaaagagggctttccccacgagacatcgct
catgctgtccttcggaacttcagtggcaaagacaacatccaggccctgagcatctttaca
gccagtcttccggaggccaggcacaaggaagaagtcagtactgtggagctgatcaagcag
aacattttatccagagactccagaggggcccaaagcaggaaggagattcagtcatctgtc
acgatggtctccctacggggttcttgccaacacttgtctccctctttgcagatcaccact
ttctcaaggctgctgactggaagtgactgtgatgtcctagcatctgagctgagaggactg
gcctcaaagcctgtggtgctgtcactacagcagtatgacactgaatactcgttccttaag
gatgtccgctcctgcttaatgaacccaggcgagtgtaaaatcctagtcatccagacagac
tctgaagatggcatccgtagcgcacagctcgtagcctctgccaagtatgttttcaaggct
tgtccagaaacaacacagggaaccaacagtcacagctttagaaaaaatgacgtcaccaga
ctgcagaatgtcactatcagccagctgttcaagccaggggaccaactgacaggtgaccca
gaggaggacatggagatagagaccagcaagtcaggggaagtggcagaggaacaaatggaa
gtggaaggttcagaggagatgcaaaacacctctgactcaggaggctgtgatgtgagtcat
gcttttgtcattggctggggtttcctatgttcctgttgcagacataccctttggaagcgg
atccaagatgtggtcacccccatcctggcgagcatgatatctcacattgatagagatggt
aacctggagctactggcccagccagattcaccggcctgggctcaagatctttggatgttt
atttacagtgatattaagttcctgaacatccctcttgtgttgaataacacaaggtccaac
aatgagatgtccttcatcctggtgcagagccacatgaacctgttcgaggatgcctgcaat
gctgtccctttcagctggaggatcagggactacctggaggagctctgggtgcaggcacag
tatatcacagacactgagggattatcgaagaagttcgtggaaatcttccagaaaactctc
ttgggcatgtttattgctcagttccctgtggaccagcagcaggcactcctgcagagctac
ttgaaggacttcctgctcttgaccatgagagtgtcttcatgggaggagttaaggtttctg
cagatggccctgtggtcctgcctcagtgagctccaagtggcttcaggaacacctgaagaa
gggctctccttgccctgggtgcaccttgcctatcagcacttccggacccggctacagaac
ttctctagaattttgaccatccaccccctggttctgagccgcctgagtcaagcagcggag
aagcacgacttggctgggtgtgaaatgacactggatgcatttgcagcaatggcctgtgct
gaaatgctcaagggagacatcctgaagccaagccccaaggcttggttacagctcgttaag
agtctgtccacgccactggagcttgtctgttcagaagggtactttcgagacagtgggagc
atgaccagacttgtcatccaggaggtcagagccctgtggaattgcattttctccattgcc
ctctttgtggagcacgttcttctggggactgagagccagatacctgagctgagtccactg
gtaaccaagtacgtcttcttactagacaaagtaagtactgggcttcaggagctgcttctt
gcagccagcacttctgctctggaattgatcgctttcttcagttctaggtttggtattcag
ccatgtttaatctgccacggagatgcacaggatcccgtctgtctgccctgtgatcatgtg
tgttgtctactttgcattcaaacatggctcatcccaggacaaatgatgtgcccctactgc
ttaactgacttgccagacaggttctcacctactgtttcccaggaccacagggatgccatt
gagaagctggcccagttctggcacatgtgcaacagcttcttcgtggacctagtctctgcc
atgtgcttcaaggataacactccccctgagaagagtttaacccctatactgctgcaattg
cagaaggaccacctaagtctgatggaccgatacctcgtccacggtgatgaatacaaagct
gtccgtgatgcaatggccaaagctgtgctcgagtgcaagaccgtagacattgggaatgct
ctgatggcctgcagaagccccaaagtccagaagacagcctacttattgctggccttgtac
acagaggtggctgctttgtaccatccccgcaatgacagactccatccagaaccaaagcaa
ttggaggctgtgaacaaattcattacggaaagcaagatcctctctgctcctaacatcaga
tgctttgcaaaatcactagtggataatagtctgcccctgctgcagaccaggtcggctaac
agcagcctgcaaggaacagtgactgaaatggccatccatatggcaaccatacttctctgt
ggacaaaacaaggttttagagcccctgaggaacttggccttctatcccgtcaacatggcg
aatgcttttcttccaacaatgcctgaagacctgctagttcacgccaggaattggaagggc
ctggaaaatgtccactggtacacttgccccaacggccatccatgcacggtaggagagtgt
ggcaggccaatggaagagagcttctgtccggactgccatgctcccattggaggccggaac
cacatgccgcgtgagggtttcacaaccatcagaaacaatgaggataggacacagactggc
cacgtgctggggaacccatggtccagtggtgtagcagaaacatctgaccgagggcagtcc
ccagtggtctttattctcacccggctactcactcatttggctatgcttgtgggagtcacc
cagcatccccagggcaacccacacattcttgttttatttgtaggggtgttaaattttaat
gcaaaattgtccaccaaaggatgcagaaacaactgggagaaacattttgaaactcttcta
cgtgaactgaagcatcttgacagaaccttgccagctataaatgctcttatcagccaagat
gagcgcatcagctccaaccctgtaaccaaaattatatatggagacccagcaaccttcctg
cctcacttgccccaaaaaagtatagttcattgctcaaagatttggagctgcaggaagaag
atcacagtggagtacctgcagcacatcgtggaacagaaaaatggcaaagaaactgtgcct
gtcctctggcacttcctccagaaggacgcagagctgaggctggtgaaattcttgcctgag
atcttggctctgcaaagagatctagtcaaacagttccagaatgtccccgaagttgagtac
agttccatcagaggttttattcgaagccaccattcagatgggctgagaaagctgttacac
gatcgaatcaccatctttctgtccacatggaatgcactgaggcggtcgctggagaccaat
gcactgtatcatcagaggagtcaggagaggaatctggaggcaggagctgatgcacaggcc
gtgagcatggggagcaggggaagtagaatgagctcaagacagaaacgggggaatgtgcct
atgatgtggcatttagattccgtaatgcacatgggtgacnncctgttcctctttcaggcc
ttaaacagatgccagctgagacacatcattgccctctggcagttcctatctgcgcataag
tcagaacagcggctgcgactgaagaaagagctatttcgggaaattgatgtgaagtacaaa
gtggacctcagtacagagcacaaaagcctcctcagcacgttcctgaatgaggcatgccta
gacaccttcctcctggagctccacgagatgattgtgctgaaactcaggggcccggagact
gagagcagcttcaaccccaattggcggctcatggaaactctagtaacctacatggatatt
aaaggcagtgtcatccctctcgaggtggagtcccagttcccagaaaagatcatgatgtcc
agctgcatcccagtgtggaaagcagctgccatgcgcaagtgggagcgtcaatcaaggtag
DBGET
integrated database retrieval system
