Mastomys coucha (southern multimammate mouse): 116078835
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Entry
116078835 CDS
T07224
Symbol
Med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116078835 (Med13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116078835 (Med13)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
116078835 (Med13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
116078835
NCBI-ProteinID:
XP_031210017
LinkDB
All DBs
Position
Unknown
AA seq
2171 aa
AA seq
DB search
MSSSFVSNGASLEDCHCNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLGVWRRDQRPGRRELWIFWWGKDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGKWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYLLSEEHVALAQQSNSPFQVILSPFGLNGTLTGQAFKMSDSATKKLIGEWKQFY
PISCGLKEMSEERQEAMDWEDDSLAAVEVLVAGVRMIYPACFVLVPQSDIPTPSSVGSSH
CSASCLGIHQVPASTRDPAMSSVTLTPPTSPEEVQTVDPQSAQKWVKFSSVSDGFSTDST
SHHGGKIPRKLANHVVDRVWQECNMNRLQNKRKYSATSSGLCEEETADKIGCWDFVEATQ
RTNCSCLRHKSLKARNTGQQGQAPSLGQQQQVLPKHKTNEKQEKSEKPQKRPLTPFHHRV
SISDDIGMDTESASQRLVISAADSQVRFSNIRTNDVAKTPQMHGTELANSPQPPPLSPHP
CDVVDEGVTKTPSTPQSQHFYQMPTPDPLVPTKPMEDRIDSLSQSFPPPFQEAVEPTVYV
GTAVSLEEDEANVAWKYYKVPKKKDVEFLPPQLPNDKFKDDPVGPFGQESVTSVTELMVQ
CKKPLKVSDEIVQQYQIKNQYLSAIASDTEQEPKIDPYAFVEGDEEFIFTDKKDRQNSER
EAGKKHKVDDGTSAVTVLSHEEDAMSLFSPSKQDAPRPINHARPPSTSLIYDSDLAVSYT
DLDNLFNSDEDELTPGSKKSASGSDDKASSKESKTGNLDPLSCISTADLHKMYPTPPSLE
QHIMGFSPMNMNNKEYCSVDTAPGGTVLEGNSSSAGTQFRIEVEEGFCSPKPSEIKDFSY
VYKPENCQVLVGCSMFAPLKTLPSHCLPPIKLPEECVYRQSWTVGKLDLLPSGPSMPFIK
EGDGSNLDQDYGPAYTPQTHASFGMPPSSAPPSNGGAGILPSPSTPRFPTPRTPRTPRTP
RGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESV
MNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNNSGLF
LEDELDIIGRNTDCGKEAEKRFEALRASSVDTVSGSLKESEKVPDELILLLQDQCTNLFS
PFGAADQDPFPKVGISNNWVRVEERDCCSDCCLALEHGRQFMDNMSGGKVDEALVRSSCL
HPWAKQNDASVQCSQDILRMLLSLQPVLQDAIQKKRTVRPWGVQGPLTWQQFHKMAGRGS
YGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWEKLMLEPYGSQRDIAYVVLCPENEAL
LNGARSFFRDLTAIYESCRLGQHRPISRLLTDGIMKVGATASKKLSEKFVTEWFSQAADG
NNEAFSKLKLYAQVCRYDLGPYLASQPLDSSLLSQPNLVAPPNQSLVTAPQMTNTGNANA
PSATLASAASSTMTMTSGVAISTSVATANSTLTTTSSSSSSSMSSGVSSNKLPSFPPFGS
MSTSGTGSMSAQASTVQSGQLGGQPSSSLQAAGISGESASLPTQPHPDVSESTMDRDKVG
IPTDGDSHAITYPPAIVVYIIDPFTYENKDESTNSSNVWTLGLLRCFLEMVQTLPPHIKS
TVSVQIVPCQYLLQPVKHDDRQIYSQHLKSLAFSVFTQCRRPLPTSTNVKTLTGFGPGLA
METALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCLSHDQRWI
LASCTDLYGELLETCIINIDVPNRARRKKGSARRFGLQKLWEWCLGLVQMSSLPWRVVIG
RLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVAMEPQGSF
VIMPDSVSTGSVFGRSTTLNMQTPQLNTPQDTSCTHILVFPTSASVQVASATYTTENLDL
AFNPNNDGADGMGIFDLLDTGDDLDPDIINILPASPTTSPVHSPGSHYPHGGDAGKGQGT
DRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQYQCPLFLKASLHLH
VPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPAIQDRRSCLPIHFVVL
NQLYNFIMNML
NT seq
6516 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctccttcgtgtcgaacggggccagcctggaagattgtcactgtaacctcttc
tgcctggccgacttgacaggaattaagtggaaaagatatgtatggcaaggcccaacttct
gcccctattctgtttccggtgacagaagaagaccccattttgagcagttttagtcgatgc
cttaaggcagatgtacttggtgtttggcggcgagatcaaagacctggaagaagagaattg
tggatattttggtggggtaaagatcccaattttgctgaccttattcaccatgacttatca
gaagaggaagatggagtatgggagaatggcctttcctatgaatgccgtactttgcttttc
aaagcagttcacaatctgttggagcgatgtttaatgaaccgaaactttgtacgaattggc
aagtggtttgtgaagccatatgagaaagatgaaaaacctataaataaaagtgaacacttg
tcctgctctttcacctttttcttgcatggagacagcaatgtttgtaccagtgtggaaatt
aaccaacatcaacctgtgtaccttctcagtgaagagcatgtcgcccttgctcaacagtct
aatagcccatttcaagttatcttaagtccatttggactaaatggcactctcacgggacag
gctttcaagatgtctgattcagctacgaaaaaattaattggtgaatggaaacagttctat
cctatttcatgtggtctgaaggagatgtctgaagaaagacaggaagctatggattgggaa
gatgactccttggctgcagtagaagttcttgttgcgggcgtccgaatgatctacccagca
tgctttgttctagtccctcaatcagacattcctactcctagctctgtgggatcctctcac
tgttcagcttcttgcttgggtatccatcaagtgcctgcttccacaagagatcctgctatg
tcttcagttactctcactccacctacatctcctgaggaagtccaaacagttgatcctcag
tctgcacagaagtgggtcaaattttcttcagtatctgatggcttcagcactgacagtact
agccatcatggtgggaaaatacccagaaaattagcaaatcatgtggtggatagagtctgg
caagaatgtaatatgaacagattacagaacaagaggaagtattctgctacgtccagtggc
ctatgtgaggaagagactgctgataaaataggatgctgggactttgttgaagccacacaa
agaacaaactgcagttgtttgaggcataaaagtctcaaggcaagaaatactgggcaacaa
ggacaggcaccatctttagggcagcaacagcaagtacttcctaagcacaagaccaatgaa
aagcaagaaaagagtgagaagccacaaaagcgccccttgactccctttcaccatcgtgta
tcaattagtgatgatattggcatggacacagaatcagccagccaaagacttgttatctct
gctgcagatagtcaagtgagattctcaaacatccgaactaatgatgtagcaaagactcct
cagatgcatggcactgaactggcaaattcacctcagcctcccccacttagtcctcatccg
tgtgatgtggttgatgaaggagtgactaaaacaccttcaactccccagagtcaacatttt
tatcaaatgccaacaccggatcccttggttcctaccaaaccaatggaagataggatagac
agtttgtcccagtctttcccacctccatttcaggaagctgtagaacctaccgtgtatgtt
ggtacagcagtaagcttggaagaagatgaagctaatgtagcctggaagtattacaaagtc
ccaaagaaaaaagatgtagaatttttaccacctcaacttccaaatgataaattcaaggat
gatccagttggaccttttggacaggaaagtgtaacatcagttactgagttaatggtgcag
tgtaagaagcctttaaaagtttctgatgaaatagtccagcaatatcaaattaaaaatcag
tatctttcagcaatagcatctgatacagaacaagaacctaaaattgatccatatgcattt
gttgaaggagatgaggaattcatttttactgataaaaaagatagacaaaatagcgagaga
gaagctgggaagaaacacaaggtggacgatgggacatctgctgtcacagtgttatcacac
gaagaagatgctatgtcattatttagtccctctaagcaagatgctccacgccctattaat
catgcccgtcctccatcaaccagtttgatttatgactcagatctggctgtgtcttatact
gaccttgataacctcttcaattctgatgaagatgaattaacacctggatctaaaaaatca
gcaagtggatcagatgataaagccagctccaaagaatcaaagacaggcaatctggatccg
ttatcttgcataagcactgcagaccttcataaaatgtaccccacgccaccgtcactagaa
cagcacattatgggtttctctccgatgaatatgaataacaaagaatactgtagtgtggac
acagcacctggaggaactgtcctggaaggaaatagctctagtgcaggaacacagttcaga
atcgaggttgaggaaggattctgtagccccaaaccatctgaaattaaagatttttcttat
gtctataagcctgaaaattgtcaagttctagtaggatgttccatgtttgcacctttaaaa
actctaccaagccattgtctgcctcctatcaaattgccagaagagtgtgtttaccggcag
agctggactgttggaaaattggacttgcttccttcaggcccttcaatgccattcatcaaa
gagggtgatggcagtaatttggatcaagactacggccctgcctacacaccacaaacccat
gcttcctttgggatgcctccgagcagtgcacctcctagtaatggtggcgcaggaattctt
ccttccccatccacccctaggtttccaactccaaggactccaaggactccaaggactcct
cgtggggctggtgggcctgctagtgctcaaggttcagtcaagtatgagaattcagacttg
tattcaccagcttccaccccatctacatgcagacccctcaattctgttgaacctgcaact
gttccttccatccctgaagcccacagtctttatgtaaacctcatcctttcagaatcagta
atgaatttgtttaaagactgtaattttgatagttgctgtatttgtgtctgcaacatgaat
atcaagggtgccgatgttggagtttacattccagacccaactcaagaagcacagtatcgg
tgtacctgtggcttcagtgctgtcatgaaccgaaaatttggaaataattcaggattattt
cttgaagatgaacttgacatcataggacgtaacacagactgtgggaaagaagcagaaaaa
cgttttgaagctctcagggcttcctctgtggacactgttagtggaagcctaaaggaatct
gaaaaggtgcctgatgagttaatattactgctacaagatcaatgcactaatttattttca
ccctttggagcagcagaccaagatccttttcccaaagtgggtataagtaacaattgggtg
cgtgttgaggagcgggattgttgtagtgactgctgtctcgcattagagcatgggcgtcag
ttcatggataatatgtcaggaggaaaagttgatgaagcacttgtcagaagctcatgctta
cacccgtgggccaagcaaaatgatgcgagtgtgcagtgttcacaggatatacttcggatg
ctcctttctcttcagccagttcttcaagatgctattcagaaaaaaagaacagtgaggcct
tggggggttcaaggtcctctcacatggcaacaatttcataaaatggctggccgaggctct
tatggaactgatgaatctccggaaccactgccgatccccacgtttttgttgggttatgat
tatgattttctggtgctttctccatttgctctcccttactgggagaaacttatgctggaa
ccttatggatctcaaagagatatagcctatgttgtactctgtccagagaatgaagctttg
ttaaatggagccagaagcttttttagagatctcactgcaatatatgagtcctgtcgattg
ggccaacacagacctatttctcgactgttgacggatgggatcatgaaagtgggagctact
gcatcaaagaaactttcagaaaagtttgtaacagaatggttttctcaggcagctgatggt
aacaatgaagcattttctaaattgaagctgtatgcacaagtctgcagatatgatttaggt
ccatatcttgcttctcagccgttggacagctctctgctctcccagccaaatttagttgcc
cctccaaatcagtctttggttactgcacctcagatgacaaatactggaaacgctaatgct
ccatctgccaccttagcatctgcggcaagtagcactatgacaatgacttcaggtgttgcc
atatctacttcagttgccacagctaattcaactttgaccacaacttcatcttcatcatct
tccagtatgagtagtggagtatcatcaaataaactgccttcatttccaccctttggcagt
atgagcactagtggtacaggatccatgtctgcacaagcaagtacggttcagagtggccag
ctaggaggacagccatcatcatctctgcaggcagcaggaatatcaggggagtcggcttct
cttcccactcagccacatcctgatgtgtctgaaagcacaatggatcgggataaagtgggg
attcccacagatggtgattcacatgcaattacttatccacctgcaattgttgtttatata
attgatccttttacatacgaaaataaagacgagagcactaactcttctaatgtttggact
ttggggctccttcgatgcttcttggaaatggtccagactcttcctcctcatatcaagagt
actgtttctgtacagattgttccttgtcagtacctgttacaacccgtgaaacatgacgac
agacaaatctactcccagcatttaaaatctttggctttttcggtgtttacccagtgtcgg
agaccacttccaacatcaaccaatgtgaaaacactgactgggtttggtccaggcttagct
atggaaactgctcttaaaagccctgatagaccagagtgtattcgactttatacaccacct
tttattctggctcccgtgaaggacaaacaaacagagctaggagagacctttggagaagct
ggacagaaatacaatgttctttttgtgggctactgtttatcacatgatcaaaggtggatt
cttgcatcttgcacagatctatatggagaacttctagaaacatgtatcattaacatcgat
gttccaaatagggcccgtcggaaaaagggttctgccagaagatttggcctgcagaaactg
tgggagtggtgcttaggacttgttcagatgagctctttaccatggagagttgtgattggt
cgcctgggaaggattggacatggagagttgaaagattggagttgtttgctgagtcgtcga
aacttgcaatctctgagcaaaaggctcaaagacatgtgtaggatgtgtggcatatctgct
gcagactctccgagtatccttagtgcttgtttggttgcaatggaaccccaaggttctttt
gttatcatgccagattctgtgtcaactggttctgtttttggaagaagtactactctaaat
atgcagacgcctcagctaaataccccacaagatacatcctgtactcatatacttgtgttc
cctacttctgcttctgtgcaagttgcctcagctacttacaccactgaaaatttggattta
gctttcaatcccaacaatgatggagcagatggaatgggtatctttgatttattagacaca
ggagatgatcttgatcctgatatcattaatatccttcctgcatctccaactacatctcct
gtacattctccaggctctcattacccccatggaggtgatgctggcaagggtcagggtact
gatcggctgctttcaacagaatcgcatgatgaagtaactaatattcttcaacaaccattg
gcccttggatactttgtatcaactgccaaagcgggtccattacctgactggttctggtca
gcatgtcctcaagcacaatatcaatgccctctttttcttaaggcctctttgcacctccac
gtgccttcagtgcaatctgatgagctgcttcacagcaaacactcccaccctctggactca
aatcagacttcagacgtcctcaggtttgttttggaacagtacaatgcactctcgtggcta
acctgtgaccctgcaatccaggacagacgctcatgtctcccaattcattttgtggtgctg
aatcagttatataactttatcatgaatatgctgtga
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