Mastomys coucha (southern multimammate mouse): 116078978
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Entry
116078978 CDS
T07224
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116078978 (Vps53)
Membrane trafficking [BR:
mcoc04131
]
Protein recycling
Others
EARP complex
116078978 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
116078978 (Vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
NBD94
hAT-like_RNase-H
COG3_N
FUSC
COG5_N
Med11
HrpJ
XhlA
Motif
Other DBs
NCBI-GeneID:
116078978
NCBI-ProteinID:
XP_031210303
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWCMTERISVEFCHVTRTELSKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPLPSTNPFLEDETTPEMEELALEKGELEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSSSGGLTISSLLKEKEGSE
VARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELLRQRLPAPPSGTESSSTLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagtttgtggaggagctggaggctgtgctgcagctcacg
ccagaggtgcaattagccatcgagcaggtattcccaagccaggatcctcttgatcaagct
gacttcaacgctgttgagtatatcaatactctgttcccaacagagcaatctctggcaaac
attgacgatgttgtgaacaaaattagactgaaaataaggagactagatgacaatatccgg
actgtcgtaagaggtcagacaaatgtggggcaggatggaaggcaagcacttgaagaggcc
cagaaagccattcagcaactctttggcaaaatcaaggatatcaaagacaaagcagaaaag
tcagaacaaatggtgaaagagattacccgagatattaagcagttagatcacgccaagcgc
cacctgaccacctcaatcacgaccctgaaccacctgcacatgctggcaggcggggtggac
tccttggaagccatgaccaggcgcagacagtatggagaagttgctaatctccttcagggt
gtaatgaatgttctagagcactttcacaagtacatggggatcccacagatccgacagctt
tctgaaagggtgaaggctgcgcagacagagttaggacagcaaatcctggctgattttgaa
gaagcatttccttcgcagggtaccaagaggccaggaggacccagcaatgtcctgagagat
gcatgcctggtggctaatattttggaccccagaatcaaacaagaaatcatcaaaaagttt
attaaacagcatctatcagagtacctagtactttttcaagaaaaccaagatgtcgcctgg
ctggacaaaattgacagacgctatgcctgggtgaaacgccagcttgtggactatgaagag
aagtatggccggatgtttcctcgggagtggtgcatgacagagaggatctcagtagaattt
tgccacgtgacgaggacagaactttctaaaatcatgcgagccagagctaaggaaattgag
gtgaagttgcttctttttgcgattcagagaacaactaactttgaggggtttcttgcaaaa
cgcttctccggttgcaccctgacagatggaaccctgaaaaagctggagtccccactgcca
tctaccaatcccttcctggaagatgagacaacaccagagatggaggagctggctctggag
aaaggagagttagagcaaccaaagaagcccaaagccccagacaatccgtttcatggcatt
gtctccaaatgttttgaacctcatctctacgtgtacattgaatcccaggacaaaaacctc
agcgagctgatagaccgctttgtggccgatttcaaagcccagggcccacccaagcccaac
actgacgaagggggtgctgtgctccccagctgcgctgacctctttgtctactataagaag
tgcatggtgcagtgctcacagctcagcacaggcgagcccatgatcgccctgactaccatc
ttccagaagtatctacgggaatatgcctggaaaatcctctctggcaacctgcctaaaacc
agcagcagcagtggggggctgaccatcagcagcctcctcaaagagaaggagggctcagaa
gtggccaggtttactctagaggagctgtgtctcatctgtagcatcctgagcacagccgag
tactgtctggctaccacccagcagctagaagaaaaactcaaagaaaaagttgatgtgagt
ctgactgaacgaattaatctcacaggagaaatggacacattcagcactgtcatctccagc
agcatccagctgttggttcaggatctggatgcagcctgtgaccctgccctgattgccatg
agcaagatgccatggcagaatgtggagcatgttggtgaccagagtccttatgtcacttct
gttattcttcacattaagcagaacgtccccatcatccgtgacaacctggcttccacacgg
aaatacttcacacagttctgcattaaatttgcaaattcgttcattcccaaattcatcacc
cacctcttcaagtgtaagcccatcagcatggtgggagcagagcagcttctgctggacacc
cactctctgaagatggtcctgctcgatctcccatccattggctcacaggtggtgaggaag
gcccctgccagttacactaagattgttgtgaaaggcatgacccgggctgaaatgatcctc
aaggtggtgatggcccctcatgaaccattggtagtgtttgttgacaactacatcaaactc
cttacagactgcaacacggaaactttccagaaaatactggatatgaaggggctcaagagg
agtgagcagagcagcatgctggaacttttgcggcagaggctccctgccccaccttcaggg
acagaaagttccagcacactgtccctgatggccccaacaccagagcaggaatcatcacgc
atccgcaaacttgagaaactgattaaaaagagactgtaa
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