KEGG   Mastomys coucha (southern multimammate mouse): 116079011
Entry
116079011         CDS       T07224                                 
Symbol
Wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
  KO
K17908  autophagy-related protein 18
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04136  Autophagy - other
mcoc04140  Autophagy - animal
mcoc05010  Alzheimer disease
mcoc05014  Amyotrophic lateral sclerosis
mcoc05016  Huntington disease
mcoc05017  Spinocerebellar ataxia
mcoc05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116079011 (Wipi1)
   04136 Autophagy - other
    116079011 (Wipi1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    116079011 (Wipi1)
   05014 Amyotrophic lateral sclerosis
    116079011 (Wipi1)
   05016 Huntington disease
    116079011 (Wipi1)
   05017 Spinocerebellar ataxia
    116079011 (Wipi1)
   05022 Pathways of neurodegeneration - multiple diseases
    116079011 (Wipi1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcoc04131]
    116079011 (Wipi1)
   03029 Mitochondrial biogenesis [BR:mcoc03029]
    116079011 (Wipi1)
Membrane trafficking [BR:mcoc04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    116079011 (Wipi1)
Mitochondrial biogenesis [BR:mcoc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    116079011 (Wipi1)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_NWD2_C Beta-prop_WDR19_1st WDR55 Beta-prop_HPS5 Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_RSE1_2nd DUF5711 Beta-prop_EML EIF3I Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd BCAS3_WD40
Other DBs
NCBI-GeneID: 116079011
NCBI-ProteinID: XP_031210410
LinkDB
Position
Unknown
AA seq 446 aa
MEAEAADAPPGRVEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPSNPTGLCALSINHSNSYLAYPGSQSTGEIVLYDGNSLKTVC
TIAAHEGTLAAITFNSSGSKLASASEKGTVIRVFSVPEGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTDSRPEEPSTWSGYMGKMFMAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGECVLIKTHSLL
SSGTTEENKENDLRPSLPPSYAATVARPSTSAASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggaggccgaagccgcagatgcccctccgggccgagtggaggcagcgctcagctgcttc
tctttcaaccaagactgcacatccctagcgattggaaccaaggccggttacaagctgttt
tctctgagttctgtggagcaacttgaccaagtccatggaagcaatgaaatccctgacgtg
tatattgtggaacgcctcttctccagcagcctcgttgtggtggtcagtcacacaaaacct
cggcagatgaacgtgtaccacttcaagaaaggcactgagatctgtaattacagctactcc
agcaacattttgtctattcggctgaaccgacagaggctgctggtctgcctggaagaatcc
atctatatccacaacattaaagatatgaagctactgaagacccttctggatatcccctca
aacccaacaggtctctgtgccctctctatcaaccattccaactcttacctggcctatcct
ggaagccagagtacaggcgagattgttctctacgatggaaactccctgaaaacagtgtgc
accattgctgcccacgagggaacactggctgccatcaccttcaactcctcgggctccaag
ctagcaagtgcgtctgaaaaaggcactgtcatccgagtgttctctgttcctgaggggcag
aagctctatgagtttcgtcgaggaatgaaaaggtatgtgacaatcagctctctggtgttc
agtatggactctcagttcctttgtgcctccagcaacacggagaccgtgcacatcttcaag
ttggaacacctgaccgacagccgcccagaagagccttccacctggagcggctacatggga
aagatgttcatggcagctaccaactacctccccgcccaggtgtcggacatgatgaaccag
gacagggctttcgccacaggacgcctgaacttctctgggcagaagaacatttgcaccctg
tccacgatccagaaactaccgcggctgctagtggcctcctctgacggacacctttacatc
tacaacttggaccctcaggatggaggagaatgcgtcttaatcaaaacccacagcttgctt
agctcaggaacaacagaagagaacaaagaaaatgacctcagaccttccttacctccatct
tacgctgcaactgtagcaaggcccagcacatccgcagcctccacagtgccagggtactct
gaggatggaggggcgctccgaggagaagttattccggaacacgagtttgcaacgggacca
gtgtgtcttgacgacgagaatgagtttccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcctga

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