Mastomys coucha (southern multimammate mouse): 116079056
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Entry
116079056 CDS
T07224
Symbol
Synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116079056 (Synrg)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
116079056 (Synrg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
116079056
NCBI-ProteinID:
XP_031210563
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MALRPGAGASGAAGAGAGPGGAGSFMFPVAGGMRPPQGLIPMQQQGFPMVSVMQPNMQGM
MGMNYSSQMSQGPIAMQAGIPMGPMPATGVPFLGQPPFLSMRPTGPQYTPDMQKQFAEEQ
QKRFEQQQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKNRDDALEAIKGNLDGFSRDA
KMHPTPASHPKKPDCPTSSHSTKTVSPSSAFLGEDEFSGFVQGPVELPTCRPSSTARPFQ
SFLPSTPLGQLHTQKAGAQPLPPGQAPVSFAVHGVHGQIPCLSTASPSHSVQKAGPSLEE
KLLVSCDISTSGQEHVKLNTPEAGHKALVPGSSKNCPGLMAHNRGAVDGCVSGPTTAEAE
KTSDQTLSKEESGVGVFPSQDPVQPRMPPWIYNESLVPDAYKKILETTMTPTGIDTAKLY
PILMSSGLPRETLGQIWALANRTTPGQLTKEELYTVLAMVAVTQRGVPAMSPDALNQFPA
APIPTLSGFPMTLPTPVSQPAAMPSGPAGSMPLTLGQPIMGINLVGPVGGAAAPTSSGFM
PAYPSNQVGKTEEDDFQDFQDASKSGSIDDSFTDFQEMPASSKTSNSQHGNSAPSLLIPL
PGSKAPTDKYAVLKGISADKPSENPASFGESGDKYSAFRELEQTTDSKPLGESFAEFRST
GTDDGFTDFKTADSVSPLEPPTKDTFPSAFASGAAQPTQTQVKAPLNLADLDMFSSVDCS
GERPVPFPATFSTAKSVSMRPQPVGSAASAALASTKTSSLADDFGEFNLFGEYSNPASVG
EQDDFADFMAFGNSSISSEPKAGDKYEALREEVSPGPLSSSTMEGAQNPPAASTKYDVFK
QLSLEGAGLAMEEFKENTSSTKSDDDFADFHSSKFSSTSSDKSLGEKAVAFRHTKEDSSS
VKSLDLPSIGGSSVGKEDSEDALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPAA
GLALASEDALPETPFPAFASFKDMMPQTTEQKEYEIGDFQDFTRQDMVDRSQETSCPSPA
SSVASHETPKEGADDFGEFQSEKPKISKFDFLVANSQSKMKSSEEMIRSELATFDLSVQG
SHKRSLSLGDKEISRSSPSPALEQPFRDRSNTLSERAALPVIRDKYKDLTGEVEENERYA
YEWQRCLGSALDVIKKANDTLNGISSSAVCTEVIQSAQGMEYLLGVVEVYRVTKRVELGI
KATAVCSEKLQQLLKDIDKVWNNLIGFMSLATLTPDENSLDFSSCMLRPGIKNAQELACG
VCLLNVDSRSRKEETPAEEQPKKAFNSETDSFKLAYGGHQYHASCANFWINCVEPKPPGL
LLPDLL
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggccgggagccggagccagcggcgcggcgggggcgggcgcgggccccggc
ggggcaggcagcttcatgtttcctgttgcaggtggaatgaggccccctcaaggcctgatt
ccaatgcaacagcaaggatttcctatggtctctgtcatgcagcccaatatgcaaggcatg
atgggaatgaactacagctctcagatgtcccagggacccattgcaatgcaggcaggaata
ccaatggggccaatgccagcaacgggtgtgcctttcctgggtcagccacctttcttgagc
atgcgacctacaggcccacagtacactccagacatgcagaagcagtttgcggaagagcaa
caaaaacgatttgaacaacaacaaaagctcttagaagaagaaagaaagaggcgtcagttt
gaagagcaaaaacaaaagctcagacttctcagtagtgtgaaacccaagacaggggagaag
aacagagacgatgctttggaagccataaaaggaaacttggatgggttttccagagatgct
aagatgcaccccactccggcatcacacccaaagaaaccagactgccccacatcatctcat
tctactaaaactgtctccccatcatctgcctttcttggcgaagacgaattcagtggcttt
gtgcaggggcctgttgagcttcccacttgcaggccttcttccacagcccggccctttcag
tcttttctccccagcaccccactcggccagttacatacacagaaggctggggcacagcct
ctacctccaggtcaggctccagtgtcttttgcagtgcatggtgtccatgggcaaatccct
tgtttatctactgcttcaccttcccacagtgtgcagaaagcaggcccttccttggaagag
aagctcctagtatcttgtgatataagtacatctgggcaggaacatgttaaattaaacact
cctgaagctgggcataaagccctagtcccaggttccagtaaaaactgccctggtttaatg
gcccataaccggggtgctgtggatggatgtgtgagtggtcccaccactgcagaggcagaa
aagacttcagatcaaaccctgtcaaaggaagagagtggtgtgggcgtgtttccctctcag
gatcctgttcagcccagaatgcctccttggatttacaatgagagtttggttccagatgcc
tataagaaaattttagaaaccacaatgactccaactggaatagatactgctaaactttat
cccattctgatgtcatctggacttcccagggaaactctcggacagatatgggccttagct
aatcgaaccacacctggccagctcactaaggaggagctttataccgttctcgccatggta
gcagtaacacagaggggtgttcctgccatgagccctgatgctttgaaccagttccctgcg
gctcccattcctaccttaagcggctttcctatgactctgcctaccccagtgagccagcca
gcagcgatgccctctggccctgcaggctccatgcccctcacccttggacagcccatcatg
ggcattaaccttgttggaccagtgggtggagctgcagcaccaacttccagtggcttcatg
ccagcctacccctcaaaccaggtgggaaagacagaagaagatgacttccaggattttcaa
gatgcttcgaaatcaggatccattgatgattctttcactgacttccaagagatgcctgct
tcctcaaaaaccagtaattcccagcatggaaacagcgctccatcactcttgatcccactt
cctggaagtaaggctcccacagacaaatacgcagtgcttaaagggatttccgctgacaag
ccctccgaaaaccctgcttcatttggagagtctggtgataaatacagtgctttcagggaa
cttgagcaaacaacagacagtaagcctttaggagagagctttgctgagttcagatccaca
gggaccgatgacggcttcactgacttcaagaccgccgatagcgtgtcacccctagagcca
ccaacaaaagacacttttccatcagctttcgcctcaggagctgcacagccgacacagaca
caggtgaaagcccctctgaacttagcagacctagatatgttctcctcagtggattgcagt
ggcgagagacctgtgccctttccagccacgtttagcacagcaaagtcagtgtccatgaga
cctcagccagtgggttctgcagcctcagcagcactggcatccactaaaacttctagcttg
gcagatgattttggagagttcaacctctttggggaatattcgaaccctgcatctgttggg
gagcaggacgactttgcagatttcatggcttttggtaacagctccatttcatctgagcca
aaagcaggtgacaagtacgaagccctcagggaggaagtgagcccgggccccctgtccagc
agcactatggagggggcacagaacccacctgctgcgtcaaccaagtacgatgtcttcaaa
cagctttccctagagggagctgggctggctatggaggagttcaaagagaatacctcttcc
acaaagagtgacgatgactttgccgacttccactctagtaaattttcatccacgagctca
gacaaatccctgggagagaaagccgtggctttcagacacaccaaagaagactcctcctca
gtgaagtcattagacctcccctccatcggtggcagcagtgttggcaaggaggactctgaa
gatgcactttctgttcagtttgacatgaaactggctgatgtgggaggagatcttaagcat
gtcatgtctgatagctctttggatttgccaacagttagtggccaacatcctcctgccgca
ggattggccctggccagcgaggatgctcttccagagactcccttcccagcttttgccagc
tttaaagacatgatgcctcagaccactgaacagaaagagtatgaaatcggggacttccag
gatttcacaaggcaggacatggtggaccggagccaagagacctcgtgtccaagcccagca
tccagtgtggcctcacacgaaacccccaaggagggtgcagacgactttggagaatttcaa
agcgaaaagcccaaaatcagcaagtttgactttttagtagctaattcacagagcaaaatg
aagtccagtgaagaaatgatcagaagtgagctggcaacctttgacctttctgttcaagga
tcacacaagaggagcttgagccttggggataaagaaataagtcggtcctctccgtccccg
gccctggagcagcccttcagagaccggtccaacactctgagtgagagggctgccctgccc
gtcatccgagacaagtacaaggatctgaccggcgaagtggaggaaaatgagagatacgcg
tatgagtggcagagatgcctggggagcgccctggatgtcattaagaaggcaaacgacacc
ttaaacggcattagcagcagtgctgtttgcacagaagttatccagtcagcccaaggcatg
gagtatcttctaggcgtggtggaagtgtaccgagtaaccaagcgtgtggagctggggata
aaagccactgctgtgtgcagtgagaaactccagcagctgctgaaggacatcgataaagtg
tggaacaacttaatcggcttcatgtcacttgccacactcacacctgatgagaattcactg
gatttttcctcctgtatgttacggcctgggatcaaaaacgctcaggagctggcttgtgga
gtgtgtctcttaaatgtggactccaggagccggaaagaagagacgcctgcggaagaacag
cctaaaaaagcattcaactcagagacagacagtttcaagctggcctatggaggacaccag
taccatgccagctgtgccaacttctggatcaactgtgttgaacccaagcctcctggcctc
ctcttgccagatctgctctga
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