KEGG   Mastomys coucha (southern multimammate mouse): 116079090
Entry
116079090         CDS       T07224                                 
Symbol
Eif4a1
Name
(RefSeq) eukaryotic initiation factor 4A-I
  KO
K03257  translation initiation factor 4A
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116079090 (Eif4a1)
   03012 Translation factors [BR:mcoc03012]
    116079090 (Eif4a1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcoc04147]
    116079090 (Eif4a1)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     116079090 (Eif4a1)
   mRNA cycle factors
    Stress granule specific factors
     116079090 (Eif4a1)
Translation factors [BR:mcoc03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    116079090 (Eif4a1)
Exosome [BR:mcoc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116079090 (Eif4a1)
  Exosomal proteins of bladder cancer cells
   116079090 (Eif4a1)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 UvrD-helicase AAA_30 Flavi_DEAD Helicase_RecD
Other DBs
NCBI-GeneID: 116079090
NCBI-ProteinID: XP_031210645
LinkDB
Position
Unknown
AA seq 381 aa
MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQ
RAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVV
MALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFV
LDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEE
LTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVS
AMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRI
GRGGRFGRKGVAINMVTEEDK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgtctgcgagtcaggattctcgatccagagacaatggccccgatgggatggagccagaa
ggcgtcatcgagagtaactggaatgagattgtggacagcttcgatgacatgaatctttca
gaatccctcctccgtggtatttatgcctatggttttgagaagccctctgccatccagcag
cgagctattcttccttgtatcaagggttatgatgtgattgctcaagcccagtctgggact
gggaaaacagctacatttgccatatcaattctgcagcagattgaattagatctaaaggcc
acacaggctttggttctggcacccactcgtgaattggctcagcagatacaaaaggtggtt
atggcattaggagactacatgggtgcctcttgccatgcctgcattgggggcaccaatgtg
cgtgctgaggtgcagaagctgcagatggaagctccccatatcatcgtgggcacccctggc
cgggtgtttgatatgcttaaccggagatacctgtcccccaaatacatcaagatgtttgta
ctggatgaagcagatgaaatgttaagccgtgggttcaaggatcagatctatgatatattc
caaaagctgaacagtaacacacaggtagttttgttgtctgctacaatgccttctgatgtc
cttgaggtgaccaagaagttcatgagagaccctattcggattcttgttaagaaggaagag
ttgaccctggagggtatccgccaattctacatcaatgtggaacgagaggagtggaagctt
gacacattgtgtgacttgtatgaaacactgaccatcacccaggcagtaatctttatcaat
accagaaggaaggtggactggctcactgagaagatgcatgcccgggatttcactgtttct
gccatgcatggagatatggaccaaaaggaacgagatgtgatcatgagggagttccggtct
ggctccagcagagtattaattaccactgacctattggccagaggcattgatgtgcagcag
gtttccttagtcatcaattacgaccttcccaccaacagggaaaactacatccacagaatt
ggtcgaggtggtcggtttggccgtaagggcgtggctattaacatggtgacagaagaagac
aag

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