Mastomys coucha (southern multimammate mouse): 116079113
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Entry
116079113 CDS
T07224
Symbol
Cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04142
Lysosome
mcoc04144
Endocytosis
mcoc04721
Synaptic vesicle cycle
mcoc04961
Endocrine and other factor-regulated calcium reabsorption
mcoc05016
Huntington disease
mcoc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116079113 (Cltc)
04142 Lysosome
116079113 (Cltc)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
116079113 (Cltc)
09156 Nervous system
04721 Synaptic vesicle cycle
116079113 (Cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116079113 (Cltc)
09164 Neurodegenerative disease
05016 Huntington disease
116079113 (Cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116079113 (Cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116079113 (Cltc)
Membrane trafficking [BR:
mcoc04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116079113 (Cltc)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Proteins found in most exosomes
116079113 (Cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
116079113
NCBI-ProteinID:
XP_031210684
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgcctattcgctttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtaccttgactatggagtcagacaaattcatctgcatt
agagaaaaagtgggagagcaggctcaggtggtaatcattgatatgaatgatccgagtaat
ccaatccgaagaccaatctcagcagacagtgccatcatgaatcctgccagcaaagtgatt
gcactgaaagctggaaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgct
cttgttacggataatgcagtttatcactggagtatggaaggagagtcccagccagtgaaa
atgtttgatcgtcattctagtcttgcaggatgccagatcatcaattaccgcacagatgca
aagcagaagtggctgcttctgactggcatatctgcacagcaaaatcgtgttgttggagct
atgcagctgtattctgtagataggaaagtttctcagcctattgaagggcatgcagccagt
tttgcacaatttaagatggaaggaaatgcagaagaatcaacgttattttgttttgctgtg
cggggtcaggcaggaggaaagttacatatcattgaagttggtacaccacccacaggaaat
caaccctttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagatcagtgaaaagcatgatgtggtgttcttgattaccaagtatggt
tacattcacctctatgaccttgagactggcacatgcatctacatgaacagaatcagtgga
gagacgatctttgttactgcacctcatgaagccacagctggaataataggagtcaacaga
aagggacaagtcctatcagtttgtgtggaagaggagaacataattccttacatcaccaat
gtcctacaaaatcctgatttggctctgagaatggctgtgcggaacaacttagctggtgct
gaagaactctttgcccggaagtttaatgctctttttgcccagggaaactactcagaggct
gccaaggtggctgctaatgccccgaagggaatccttcgtactccagataccatccgtcga
ttccagagtgtcccagctcagccaggtcaaacctcacctctacttcagtattttggaatc
cttttggaccagggccagctgaacaaatacgagtccttagagttatgtagacctgtactt
cagcaagggcggaaacagcttttggagaaatggctgaaagaagataagctggaatgttct
gaagaactgggtgatctcgtaaaatctgtggaccccacgttggcactgagtgtgtacctc
agggctaatgtccccaataaagtcatccagtgctttgcagagacaggccaagtccagaag
attgttttatatgctaagaaagttggatatactccagactggatctttctcctgagaaat
gtcatgcggatcagtccagatcaaggacagcagtttgctcaaatgttagttcaggatgaa
gagcctcttgctgatatcacacagattgtggatgtctttatggaatacaatctaatccaa
caatgcactgccttcttacttgatgctttgaagaataatcgcccctctgaaggtcctttg
cagacgcgattgcttgagatgaaccttatgcatgcacctcaagttgcagatgccattctc
gggaatcagatgttcacccactatgaccgggctcatatcgcccagctgtgtgagaaggcg
ggcctgctgcaacgtgcattagaacactttaccgatttatatgatataaaacgtgcagtt
gttcatacccatcttcttaaccctgagtggttagtgaattactttgggtccttatcagtt
gaagattccctagaatgtctcagagccatgctgtctgctaatattcgtcaaaatctacag
atctgtgttcaagtggcttctaaatatcatgaacagctgtcaactcagtctctgattgaa
ctctttgaatcattcaagagttttgaaggtctcttttattttctggggtccattgttaac
tttagtcaggacccagatgtgcactttaaatacattcaggcggcttgcaagactggacaa
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatcccgagcgagtcaag
aattttctcaaggaggcaaaactaacagatcagttgccacttatcatcgtctgtgatcgg
tttgactttgtccatgacctggtgctgtatttatacagaaataaccttcagaagtatata
gagatctatgtccagaaggtaaatccaagtcgacttcctgtggttattggaggattgctg
gatgttgactgctctgaagatgtcattaaaaatttgattcttgttgtgagaggtcaattc
tctactgatgagcttgttgctgaagttgaaaaaagaaacagactgaagctgcttcttcct
tggcttgaggctagaattcatgagggctgtgaggagcctgctactcacaatgcattagcc
aaaatatacattgacagtaacaacaacccagagagatttcttcgtgaaaacccttattat
gacagtcgtgttgttgggaagtactgtgagaagagagacccacatctggcttgtgtcgct
tatgaacgtggccagtgtgacctggaactcatcaatgtttgcaatgagaattccctcttc
aaaagtctttctcgctacctggtccgtcggaaggatccagaattgtggggtagtgtgcta
ctggaaagcaatccatacagaagaccattgattgaccaggttgtacagacagccttgtct
gaaactcaggacccagaagaagtgtcagtaactgtcaaggcttttatgacagcagatctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcaaaacctcctcatcctcactgcaattaaggctgaccgaacacgtgtt
atggagtatattaaccgcctggataattatgatgctccagacattgccaacattgccatc
agcaatgagctgtttgaagaagcatttgctattttccggaagtttgatgtcaatacttca
gcagtgcaggtgttgattgagcacattggaaacctggatcgtgcatatgagtttgctgaa
cgctgcaatgagcctgctgtttggagtcaacttgcaaaagctcagttgcagaaaggaatg
gtaaaggaagccattgattcctacatcaaagcagatgatccttcttcttacatggaagtt
gtacaggccgccaacactagtggaaactgggaagaattggtgaagtatttgcagatggca
cgcaagaaggctcgagagtcctatgtggagacagaattgatatttgcactggctaaaaca
aaccgccttgctgaattagaagaatttatcaatgggcccaataatgctcatattcagcaa
gttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagttgttgtacaataat
gtttctaactttggacgcttggcatctacccttgttcaccttggcgagtatcaggcagca
gttgatggtgctagaaaagctaatagtactcgaacatggaaagaggtctgctttgcctgt
gtagatgggaaagagtttcgccttgctcagatgtgtggactccatattgtggtgcatgca
gatgaattagaggagcttattaactactatcaggatcgtggatattttgaagaactcatc
accatgttggaggcagccttgggactagagcgagctcacatgggaatgttcacagagcta
gctattttgtattctaaattcaagccacagaaaatgagggaacacctggagttgttctgg
tcgagagtgaatattcctaaggtgctgagagctgcagagcaagctcatctttgggcagag
ctggtgttcctctatgacaagtatgaagagtatgataatgccatcatcaccatgatgaat
caccccactgacgcatggaaggaggggcagttcaaagacatcatcaccaaggtggctaat
gtggaactgtactacagagcaatccagttctacttagaattcaagcctttgttgttaaat
gacttgctcatggtgctgtctccacggttggatcacactcgtgcagtcaattatttcagc
aaggtaaaacagctaccactggtgaaaccatatttacgctcagttcagaaccacaacaac
aaatctgtgaatgaatccctgaacaacctcttcatcacagaggaagactaccaggctctg
cgaacatcaatagatgcttatgacaactttgacaacatctcacttgctcagcgtttggaa
aaacacgaactcattgaattcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgtagagctgtgcaagaaagacagcctttacaaggatgcaatgcagtat
gcctctgaatcaaaagacacagagttggctgaagagctcctacagtggtttttgcaggaa
gaaaaaagagaatgctttggagcttgtctctttacctgttatgatcttttaaggccagat
gtcgtcctggaaactgcatggagacataatatcatggattttgccatgccctatttcatc
caggtcatgaaggaatacttgaccaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagagtcactgagaaaagaggaagaacaagctacagagacacagcccattgtt
tatggtcagccgcaactgatgctgacagcaggacccagtgtggcagtccctccccaggca
ccttttggttatggctatactgcaccaccatatgggcagccacagcctggctttgggtac
agcatgtga
DBGET
integrated database retrieval system
