Mastomys coucha (southern multimammate mouse): 116079124
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Entry
116079124 CDS
T07224
Symbol
Nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116079124 (Nup85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116079124 (Nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116079124 (Nup85)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116079124 (Nup85)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116079124 (Nup85)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116079124 (Nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
TPR_14
Motif
Other DBs
NCBI-GeneID:
116079124
NCBI-ProteinID:
XP_031210719
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MEELDCEPAVTWIPGVNSKKQMCFDWGPGEMLLCETSFNRTDKSEKVPSCPFIYIIRKDV
DVYSQILRKLFNESHGIFVGLQKIEEELSGKSRKAQLVRVSKNYRSVIRACMEEMHQVAI
AAKDPASGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDTLS
ADVLGSDNPSKHESFWNLVTVLVLQGRLDEARQMLSKEADANPSSAGMCRVLGDLMRTMP
ILSPGNTQTLTELELKWQHWREECERHLQDNTFAANPRLESLCKILLGDEAALLEQKDLL
SNWYHFLVTRLLYSNPTVKPIDLHFYAQSSLDMFLGGESSPEPLDNILMAAFEFDIHQVI
KECSIALSNWWFVAHLTDLLDHCRLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLGV
DYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVGSICKILAMKAVRNN
RLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGKY
REFHRLYGEKRFGDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYELM
RCLEDLASGRPECGEPDAQRLQDDDIETTKVEMLRLALARNLARAIIREGSLEGS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggactgcgagcccgcagtaacttggattccaggtgtgaattccaagaag
caaatgtgttttgactggggccctggggagatgctgctgtgtgaaacttccttcaacaga
acggacaaatcagagaaggtgccgagctgcccctttatctacatcatacggaaagatgtg
gatgtttactctcaaattttgagaaaactcttcaatgaatcccatggaatctttgttggc
ctgcaaaaaattgaggaagaactgtccgggaaatccaggaaagctcaattggttcgagtg
agtaaaaattaccggtcagtcatacgggcctgtatggaagagatgcaccaggttgcaatt
gctgctaaagatccagccagtggccggcagttcagcagccaggtctccattttgtcagcc
atggagctcatttggaacctgtgtgagattctttttattgaagtagcaccagctggccct
ctcctcctccatcttcttgactgggtccgactacacgtgtgcgaggtggacactttgtcg
gcagatgtcctgggcagtgacaacccaagcaagcatgagagcttctggaacctggtgact
gttttggtgcttcagggccggcttgatgaggcacgacaaatgctatccaaagaggctgat
gccaacccctcttctgcaggcatgtgccgcgtccttggggatctgatgaggacaatgccc
attctcagccctggcaacactcagacactgacagagttggagctcaagtggcaacactgg
cgtgaggagtgtgaacgacacttgcaagacaacacatttgcagccaacccccgtctggag
tctctctgcaagatcctgctaggggatgaggccgccttgttggagcagaaggaccttctg
agcaactggtaccacttcctagtgaccaggctgctgtactctaaccccacagtgaaacct
attgacctgcacttctatgcccagtccagcctagacatgtttcttggaggtgagagcagt
ccagaaccactagacaacatcttgatggcggcctttgaattcgacattcaccaagtgatc
aaagagtgcagcattgccctgagcaactggtggttcgtagctcacctcacagaccttttg
gatcactgcagactcctccagtcacacaatctctattttggctctaacatgagagagttc
ctgctgctggagtacgcctcgggactgtttgcccatcacagcctgtggcagctgggggtg
gactactttgactactgcccggaactaggccgagtttccttggagctgcacattgagcgg
attcctctcaacacagagcagaaagccttgaaggtgctgaggatttgtgagcagcggcag
atgactgaacaagttggaagcatctgtaagattttggccatgaaggctgttcgcaataac
cgcttgggctcggccctctcttggagcatccgtgctaaagacgccgcctttgccacactc
gtgtccgacagattcctccgggattactgtgagagaggctgcttttctgacttggatctc
attgacaatttggggccagccatgatgcttagtgatcgactgacatttctgggaaagtac
cgggagttccacagactgtacggggagaagcgctttggtgacgctgcttctcttctgctg
tccctcatgacctctcagattgcacctcgttctttctggatgactctgctcacagatgcc
cttcctcttttggaacagaagcaggtgattttttcagcagagcagacatatgagctgatg
cgatgcctggaagacttggcctcagggaggccagagtgtggtgaacctgacgcccagcga
ctacaggatgacgacatagagaccaccaaggtggagatgctgagactggctcttgcccgg
aatctcgctcgggcaattataagggaaggctcactggagggcagctga
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integrated database retrieval system
