Mastomys coucha (southern multimammate mouse): 116079132
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Entry
116079132 CDS
T07224
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03440
Homologous recombination
mcoc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116079132 (Top3a)
03460 Fanconi anemia pathway
116079132 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcoc03032
]
116079132 (Top3a)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116079132 (Top3a)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116079132 (Top3a)
DNA replication proteins [BR:
mcoc03032
]
Eukaryotic type
DNA Topoisomerases
116079132 (Top3a)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116079132 (Top3a)
FA (Fanconi anemia) pathway
116079132 (Top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
116079132
NCBI-ProteinID:
XP_031210728
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MIFPVTLLAFQWQRRPGGRALSRAAMEVVFRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
KEGLSKFNKIYEFDYHLYGQNVTMIMTSVSGHLLAHDFQMQFRKWHSCNPLVLFEAEIEK
YCPENFIDIKKTLERETQHCQALVIWTDCDREGENIGFEIVHVCKAVKPNLQVLRARFSE
ITPHAVRAACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEVFHKIKVTHDHKDGTVEFNWKRYRLFNHTACLVLY
QLCMEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLVALVEQQTLDPHWGAFAQTILERGGPTPRNGSKSDQAHPPIHPT
KYTSSLQGDDRCLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLIILARNYLDV
YPYDHWSDKLLPIYEQGSRFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKFQVLRQQVQKYKQVFIEAVAKAKKLDEALSQYLGEGTEVSHQEEIYPAIPEPVRKCPQ
CNKDMVLKTKKSGGFYLSCMGFPECRSAVWFPDSVLEASRDNSVCSVCQPPPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLNEIFSLRFPRALPRASQPSGHLQASQVLNRMDSSQH
SLSQPLVNRHTGPSKAVAQTLLPPTAASESNSVTCNCGREAVLLTVRKEGPNQGRHFYKC
NGGACNFFLWADSSHPTGGGPPTSASRPAGSSVGYSSGLGSHMDGFGSLGDDSDGGTSCL
CGQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWVDENMAPGSFAAPAWPGGRGKAQ
RSEAASKRQRAGSSDAGSTVKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccggtcactctcttagcgtttcagtggcagcgacggcctggaggccgtgcc
ctgtcccgcgctgccatggaagtggtcttccgaggagtgcgaaaagttctctgcgtggcg
gagaaaaacgacgctgccaagggaatcgccgacttactgtccaacggtcgtatgaggcgg
aaagaaggcctttctaaattcaataagatttatgaatttgactatcatctgtatggccag
aatgttactatgataatgacgtcagtctctggacatttgctggctcatgacttccagatg
cagtttcggaaatggcacagctgcaatccccttgtcctctttgaagcagaaattgaaaag
tattgcccagaaaattttatagacatcaagaaaactctggaacgagagacacagcattgt
caggcattggtgatctggaccgactgtgacagagaaggtgaaaacatcggatttgagatt
gtccatgtatgcaaggctgtgaagcccaatctacaggtgctgcgagcccgcttctctgag
atcacgccacacgccgtcagggcagcctgtgaaaacctaactgagcctgaccagagagta
agtgacgcagtggatgtgaggcaagagctggatctaaggatcggagctgccttcacaagg
ttccagaccctgcggctccagaggattttccctgaggtgctggctgagcagctcatcagc
tatggcagttgccagttcccgacactggggtttgtggtggagaggttcaaggccattcag
gcttttgtgccagaagtcttccacaaaattaaagtaactcatgaccacaaagatgggact
gtagagttcaactggaaaagataccgtctctttaaccatacagcctgtcttgtcctttat
cagttgtgtatggaggatccgatggcaaccgtggtagaggtcagatctaagccaaagagc
aagtggaggcctcaagctttggacactgtggaactagagaaactggcatctcggaaattg
agaataaatgccaaagaaaccatgaggattgcagaaaagctctatacacaagggtacatc
agctacccccggacagaaacaaacatcttccccaaagacttaaacctggttgcattggtg
gaacagcagaccctggatccacactggggggcttttgctcagaccattctagagcgaggc
ggccccactccacggaatgggagcaaatctgatcaagctcaccctcccattcaccccacc
aaatacacgagcagcttgcagggagatgatcggtgtctgtacgagttcatcgttcgccat
ttcctggcttgctgctctcaggatgctcaggggcaagagactactgtggagatcgacatt
gcccaggagcgctttgtggcccacggcctcataattctggctcgtaactacctagatgtg
tatccgtatgatcactggagtgacaagctcctccccatctatgagcaaggctcccgattt
cagcccagcactgtggaaatggtggatggggagactagcccaccccaactgcttactgaa
gccgacctcatcgccctcatggagaaacatggtatcggtactgatgcaactcatgcagag
cacatcgagaccatcaaagcccggatgtatgtgggactcacctcagacaagcggttcctg
cctgggcacctgggcatgggacttgtggaaggttacgattccatgggttatgagatgtcc
aagcctgacctccgtgcggagctggaagctgacctcaagctgatctgtgagggcaagaag
gataagtttcaagttctaaggcagcaagtgcagaaatacaagcaggttttcattgaagca
gtggcaaaggcaaagaagttggatgaggccttatctcagtacttaggagaagggacagag
gtgtcccatcaagaagagatctacccagccattcctgagcctgttcggaagtgcccacag
tgtaacaaggatatggtcctcaagacgaagaagagtggtgggttctacctgagctgcatg
gggttcccagaatgtcggtcagctgtgtggtttcctgactcagtgctggaggccagcagg
gacaacagtgtgtgttctgtttgccagccaccccctgtgtacaggttaaagctgaaattt
aagcgtggtagccttcccccaactatgcccctggagtttgtcggctgcataggtggatgt
gatgagactttgaatgaaatcttcagcctgcgatttccacgggctctcccaagagctagc
cagccttctggccacctgcaggccagccaggtcctcaacaggatggacagcagtcagcat
agcctatctcaacctcttgttaaccgacatactggaccttcaaaggcagtggcccaaacc
ttgctaccacccactgctgctagtgaaagcaactctgtgacctgcaactgtggccgggag
gctgtgctgctcacggtccgcaaggagggccccaaccagggccggcacttctataagtgc
aatggtggtgcttgcaacttcttcctgtgggctgacagcagccatcccactggaggaggg
ccccccacctctgcatcaagacccgcaggcagctccgtaggatactcatctggcttaggc
agccacatggatggatttggcagccttggtgatgacagtgatggaggtacatcctgccta
tgtgggcagcctgctgtcacaaggactgtgcagaaggatggacccaacaaaggacgccag
ttccacacctgtgccaagccacgagagcagcagtgtggcttttttcagtgggtggatgag
aacatggccccagggagttttgcagccccagcatggccaggaggcagaggaaaagcccag
agatcagaggctgcaagcaaaagacaaagggctggttcctcagatgcagggtctacagta
aaaaagcctcggaaatgtagcctttgccaccaacctggacacacccggcccttttgtcct
cagaacagatga
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integrated database retrieval system
