Mastomys coucha (southern multimammate mouse): 116079134
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Entry
116079134 CDS
T07224
Symbol
Shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00260
Glycine, serine and threonine metabolism
mcoc00630
Glyoxylate and dicarboxylate metabolism
mcoc00670
One carbon pool by folate
mcoc01100
Metabolic pathways
mcoc01200
Carbon metabolism
mcoc01230
Biosynthesis of amino acids
mcoc01240
Biosynthesis of cofactors
mcoc01523
Antifolate resistance
mcoc04981
Folate transport and metabolism
Module
mcoc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116079134 (Shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116079134 (Shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116079134 (Shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116079134 (Shmt1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
116079134 (Shmt1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116079134 (Shmt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
116079134
NCBI-ProteinID:
XP_031210735
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All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MADRDATLWASHEKMLTQPLKDSDAEVYSIIKKESYRQRVGLELIASENFASRAVLEALG
SCLNNKYSEGYPGQRYYGGTEFIDELETLCQKRALQTYHLDPQYWGVNVQPYSGSPANFA
VYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVFPDTGYINYDQL
EENASLFHPKLIIAGTSCYSRNLDYARLRKIADDNGAYLMADMAHISGLVAAGVVPSPFE
HCHVVTTTTHKTLRGCRAGMIFYRKGVRSVDPKTGKETYYELESLINSAVFPGLQGGPHN
HAIAGVAVALKQAMTTEFKIYQLQVLANCKALSNALTELGYKIVTGGSDNHLILMDLRPK
GTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAQFIH
RGIELTLEIQSHMAPKATLKEFKEKLAGDEMIQSAVATLREEVENFASNFSLPGLPEF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagagatgccaccctctgggcttctcatgagaagatgttgacacagcccctc
aaggacagcgatgccgaggtttacagcatcattaaaaaggagagctatcggcagagggtc
ggattggagctgattgcttcggagaattttgccagcagagctgtgttggaggccctagga
tcttgcttaaataacaaatactctgaggggtatccaggccaaaggtattatggtgggact
gagttcatcgatgagctggagacgctgtgtcagaagcgtgcattacagacctaccatctg
gatcctcagtactggggggtcaatgtccagccttattcaggctcccctgcaaactttgct
gtatatactgccctggtagagccccatggccgaatcatgggcttggacctgccagatggt
ggccatctgactcatggcttcatgacagacaagaagaaaatctctgccacctctatcttc
tttgagtccatgccttataaggtgttcccagacactgggtacatcaactatgaccagctg
gaggagaatgccagcctcttccacccgaagctgatcatcgcagggaccagctgctactcc
cggaacctggactatgcacggctgcggaagattgcggatgacaatggggcatacctcatg
gcagacatggcacatatcagtgggctcgtggcagctggtgtggtgccttccccctttgaa
cactgccatgtagtgaccactacaacccacaagaccctgagaggctgccgtgctggtatg
atattctacagaaagggcgttcgcagtgtggatcccaagactggcaaagagacttactat
gaactggagtccctcatcaactctgccgtgttcccaggcctacaggggggtcctcacaac
catgccattgctggtgttgctgtcgccctgaagcaagccatgactacagaattcaaaatc
taccagctccaggtgttggccaactgcaaggctctgtctaatgcactcacagagctaggc
tacaaaatagtcacaggtggctctgataatcatttgatcctaatggatctgcgtcctaag
ggtactgatggcggaagggctgagaaggtactagaagcctgttctatcgcctgcaacaag
aatacctgcccaggcgacaagagcgcattacggcccagtggacttcgcctggggactcca
gcattgacatcccgaggacttttggaagaagacttccaaaaagtagcacagtttatccat
agagggatagaattgactctggagattcagagccacatggccccgaaggccacactcaaa
gagttcaaggaaaagctggcaggggatgagatgatccagagtgctgtggcaactctccgg
gaagaagtggagaattttgcttccaacttttcactacctggccttccagaattctga
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