KEGG   Mastomys coucha (southern multimammate mouse): 116079217
Entry
116079217         CDS       T07224                                 
Symbol
Larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116079217 (Larp1)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116079217 (Larp1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 116079217
NCBI-ProteinID: XP_031210928
LinkDB
Position
Unknown
AA seq 1073 aa
MATQVEPLLPAGAPLLQADEHGLARKKPAPDAQAESGPGDGGGEPDGGARRPRPACARPG
RDGTERESPRPPAAAEAPAGSDGEDGGRRDFVEAPPPKVNPWTKHAPPPPAAVNGQPPPE
PSAPAKVVRAAAPKQRKGSKVGDFGDAVNWPTPGEIAHKSVQPQSHKPQPARKLPPKKDM
KEQEKGDGSDSKESPKTKSDESGEEKNGDEDCQRGGQKKKGNKHKWVPLQIDMKPEVPRE
KLASRPTRPQEPRHTPAIRGEIKGSEPATYMPVSVAPPTPAWQPETKPEPAWHDQDETSS
VKSDGAGGARASFRGRGRGRGRGRGRGRGGTRTHFDYQFGYRKFDGTEGPRTPKYMNNIT
YYFDNVSSTEIYSVDQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDADGFLPITLIASF
HRVQALTTDISLIFAALKDSKVVEMVEENVRRREEPEKWPLPGPPIVDYSQTDFSQLLNC
PEFVPRQHYQKETESAPGSPRAVTPVSTKTEEVSNLKTLPKGLSASLPDLDSESWIEVKK
RPRPSPARPKKSEEPRFSHPTALPQQLPSQQLMSKDQDEQEELDFLFDEEMEQMDGRKNT
FTAWSEEDSDYEIDDRDVNKILIVTQTPPYMRRHPGGDRTGNHTSRAKMSAELAKVINDG
LFYYEQDLWTEKFEPEYSQIKQEVENFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRF
QQVPTDALANKLFGAPEPSTIARSLPTTVPESPNYRNARTPRTPRTPQLKDSSQTPRFYP
VVKEGRTLDAKMPRKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSSPSEGTPAVGSY
GCTPQSLPKFQHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFF
LRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDY
EAGQLYGLEKFWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHPVV
AGGSGEGRKRCPSQSSSRPATGISQPPTTPTGQATREDAKWTSQHSDTLTLGK
NT seq 3222 nt   +upstreamnt  +downstreamnt
atggccactcaagtggagccgctgctgccggcgggcgccccgctgctgcaggccgacgag
cacggcctggcgaggaagaagccggcgcccgacgcccaggccgagtcgggcccgggcgac
ggcggcggtgagcccgacggcggcgcccgcaggccgcggcccgcctgcgccaggcctggc
cgcgacggcacggagcgcgagagcccgcggccacccgcagctgcggaagccccagcggga
agcgacggcgaggacggcggccggcgtgacttcgtggaggcaccgccgcccaaggtgaac
ccgtggacgaagcacgcgccgccgccgccggccgcggtgaacggacagccgcctccagaa
ccttctgctccagccaaggtggtgagggcagctgctcctaaacagcgtaagggcagcaag
gttggtgactttggagatgcagtcaactggcctacacctggagagatagcccacaaaagt
gttcagccacagtcccacaagcctcagcctgcccgtaagctgccacccaagaaggacatg
aaggagcaggagaaaggagatggaagtgatagtaaggagagccctaaaacaaagtcagat
gaatcgggggaggaaaagaatggggatgaggactgccagcgaggcgggcagaagaagaaa
gggaacaaacacaagtgggttccattgcaaatagacatgaagcctgaagtacccagagag
aaattggcctcccgtcccactcgcccacaggaaccaagacatacacctgctatccgaggg
gagatcaaagggtctgaacctgccacctacatgcctgtatctgtggccccacccacccca
gcctggcaaccagagaccaaaccggagcctgcctggcatgaccaggatgagacatcgagt
gtgaagagtgatggggctggtggggctcgggcttccttccgtggccgtggacgggggcgt
ggtcgtggacggggccgtggacggggtggcactcgaacccactttgactaccagtttggc
taccgaaagtttgatggtacagaggggccccgcacccccaagtatatgaacaacatcact
tactactttgacaatgtcagcagcactgagatttacagtgtggaccaggagctgctcaag
gattatatcaagcgccagattgaatattacttcagcgtggacaatttagagcgagacttc
ttcctgagacggaaaatggatgctgatggcttccttcccatcacccttattgcttccttt
caccgtgtacaggccctaaccactgacatttcactcatctttgcggctctaaaggacagc
aaggtggtagagatggttgaggagaatgtccgcaggagggaagaacctgagaaatggcca
ctgcctgggcccccaatagtggattattcacaaactgatttctctcagcttctcaactgc
ccagagtttgttccccgccagcactaccagaaggagactgagtcagcacctggctctccc
cgtgcagtcaccccagtgtcaaccaaaacagaggaggtcagcaacctgaagacacttccc
aagggcctgtctgccagcctccctgatctggattccgagagctggattgaagtgaagaaa
aggccccggccctccccagcacgccccaagaagtcagaggagcccaggttctcccaccca
actgctctgcctcagcagcttccctcccagcagctgatgtctaaggatcaggatgagcaa
gaagaactagactttctgtttgatgaggagatggaacagatggatgggcggaagaatacc
ttcactgcctggtctgaagaggactctgactatgaaattgatgaccgggatgtcaataag
atcctcattgtcactcaaacaccaccttacatgcgtcggcaccctggaggggaccgcaca
ggcaaccacacttcacgtgccaagatgagtgctgagctggccaaggtcattaatgacgga
ctcttctactatgaacaagacctatggactgagaagtttgagcctgagtattcacagatc
aagcaagaagtcgagaacttcaagaaagtgaatatgattagtcgggagcaatttgacact
ctgacccctgagccccctgtggatcctaaccaggaggttcctcctgggccacctcggttc
caacaagttcctactgatgccctggccaacaagctgtttggtgctcccgagccatctacc
attgcccgttctctaccaaccactgtcccagagtctccaaactaccgaaatgccaggact
ccccgcacaccccggaccccccaactcaaagactctagtcagacaccacggttttaccca
gtggtgaaagaaggacggaccctggatgccaagatgcctcgaaaaagaaagacaaggcac
agctcgaaccctcccttggaaagtcatgtgggctgggtgatggattctcgggagcacagg
cccaggactgcttctattagctccagtccttcagagggaacacctgcagtcggcagctat
ggctgtactcctcagtcactgcccaagttccagcatccttcccatgagctgctcaaggaa
aatggcttcacacaacacgtctaccacaagtatcggaggcgctgccttaatgagcggaag
cgcttgggcattggccagtctcaggagatgaacaccctcttccgcttttggtccttcttc
ctccgagaccacttcaataaaaagatgtatgaagagttcaagcagctggcactggaggat
gccaaagaaggctacaggtacggtttggagtgcctttttcgatactacagttacggtcta
gagaagaagttccggctggacatattcaaggatttccaggaggagaccgtgaaggactat
gaggctggccagctctatggattggagaagttctgggccttcttgaaatattccaaagcc
aaaaatttggacattgaccccaaactgcaagaatacctcggcaaattccgccgcctagaa
gacttccgagtggacccccccatgggcgaggaaggcaaccacaagcgacacccagtagta
gcaggaggcagcggagagggcaggaagcggtgcccttcccagtcttccagcaggcctgcc
actgggatcagccaaccccctacgacacctactggccaggccactcgagaagatgccaaa
tggacaagccagcactcggacacactgactttgggaaagtga

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