Mastomys coucha (southern multimammate mouse): 116079582
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Entry
116079582 CDS
T07224
Symbol
Vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116079582 (Vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116079582 (Vti1b)
Membrane trafficking [BR:
mcoc04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
116079582 (Vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
YqjK
Fusion_gly
OmpH
Cir_Bir_Yir
DUF745
KxDL
DUF7203
DUF4407
Exonuc_VII_L
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
116079582
NCBI-ProteinID:
XP_031211121
LinkDB
All DBs
Position
Unknown
AA seq
232 aa
AA seq
DB search
MATSAASSEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLA
EMEEELRYAPLTFRNPMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGELKYGTYALENE
HLNRLQSQRALLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSR
LVNTNENLSKSRKILRSMSRKVITNKLLLSVIILLELAILVGLVYYKFFRHH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccacctccgccgcttcctccgagcatttcgagaagctgcacgagatcttccgcggc
ctccttgaggacctacaaggggtgcccgagcggctgctggggaccgcggggaccgaagag
aagaagaagctggtcagagattttgatgaaaagcaacaggaagcaaatgaaacgttggca
gagatggaggaagaactacgatatgcacccctgactttccgtaaccccatgatgtctaag
ctgcgaaactaccggaaggaccttgctaaactccaccgtgaggtgagaagtacacctttg
acagccacacctggaggccgaggagaactgaagtatggcacatatgccttagagaatgag
catttgaatcggctacagtctcaaagagcattgcttctacaaggcactgaaagcctgaac
cgggccacccaaagcatcgagcgctctcatcggattgccacagaaactgaccagattggt
tcagaaatcatagaagagctaggggagcaacgagaccagttggaacgtaccaagagtaga
ctggtgaacacaaatgaaaacttgagcaaaagccgaaagattcttcgttcaatgtccaga
aaagtgataaccaacaagctgctgctctccgtcatcatcctgctggagctagccatcctg
gtcggtctggtgtattacaaattctttcgacaccactga
DBGET
integrated database retrieval system
