Mastomys coucha (southern multimammate mouse): 116079698
Help
Entry
116079698 CDS
T07224
Symbol
Hdac9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04613
Neutrophil extracellular trap formation
mcoc05034
Alcoholism
mcoc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
116079698 (Hdac9)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116079698 (Hdac9)
09165 Substance dependence
05034 Alcoholism
116079698 (Hdac9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116079698 (Hdac9)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116079698 (Hdac9)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
116079698 (Hdac9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
116079698
NCBI-ProteinID:
XP_031211416
LinkDB
All DBs
Position
Unknown
AA seq
1089 aa
AA seq
DB search
MSSPVQPDGVAGREQLLAQQRMHSMISSVDVKSEVPMGLEPISPLDLRTDLRMMMPVVDP
VVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQ
QELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSA
TKDTPTNGKNHSVGRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLR
KTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNLVTSFKKRVFEVAESSVSSNSPGSGPS
SPNNGPAGNVTENEASVLPPTPHPEQLVPQQRILIHEDSMNLLSLYTSPSLPNITLGLPA
VPSPLNASNSLKDKQKCETQLLRQGVPLPGQYGSSIAASSSHVHAAMEGKANSSHQALLQ
HLLLKEQMRQQKLLVAGGVPLHAQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQS
TLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQSMED
RATSQDNSTRSDSSACVGDTLGQVGAVKVKEEPVDSDEDAQIQEMECGEQAAFMQQPPLL
ESSHTRALSVHQARLATVGVDGLEKHGLLSRTHSSPAASVSPHPAADCPRQPASATGIAY
DPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSEH
HSLLYGTSPLDGQKLDPRTLLGDDSRKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGC
VIELASKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIV
DLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGG
LDPPMGDVEYLEAFRTVVMPVAREFDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLT
KQLMTLANGRVALALEGGHDLTAICDASEACINALLGNEPGPLEEDVLHQSVNTNAAASL
QKTIEIQSKYWKSIKMVAVARGCALPASQLQEETETVSALASLTVDVEQPFAQEDGRTAG
EPMEEEPAL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccagtgcagccagatggagtggccggacgggagcagctcttggctcagcaa
agaatgcacagtatgatcagctcagtggacgtgaaatcggaggttcctatgggcctagag
cccatctcacctttagacctcaggacagacctcaggatgatgatgcctgtggtggatcct
gtcgtccgcgagaagcaactgcagcaagagttacttcttatccagcagcagcagcagatc
cagaagcagctcctgatagcagagtttcagaagcagcacgagaatctgacaaggcagcat
caggcacaactccaggagcacatcaagttacaacaggaacttctagccataaaacaacag
caagaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagtagag
aggcatcgcagagagcagcagcttcctcctctcagaggcaaagatagaggacgagaaagg
gcagtggctagcacagaggttaagcagaagcttcaagaattcctgttgagtaaatcagca
acgaaagacactccaaccaatggaaaaaatcattccgtgggccgccatcccaagctctgg
tacacggctgcccaccacacatcactggatcaaagctctccacctctcagtggaacgtct
ccgtcctacaagtacacattaccaggagcccaagatgccaaggatgatttccccttgcga
aaaactgcctcagagcccaacttgaaggtgcggtccaggttaaaacagaaagtggcagag
aggagaagcagccccttactcaggcggaaggatggaaatcttgtcacttcattcaagaag
cgagtgtttgaggtggcagaatcctcggtcagtagcaactctccagggtcaggtcccagt
tcaccaaacaatgggcctgctgggaatgttaccgaaaatgaggcttcagttctgcctccc
acgcctcaccccgagcagctggttccacagcagcgcattctaattcatgaagattccatg
aacctgctaagtctctatacctccccttccctgcccaatatcactctgggacttccagca
gtgccgtccccactcaatgcttctaactcactcaaagacaagcagaagtgtgagacacag
ttgctcagacaaggcgttcctctgcctggccagtatggcagtagcattgcagcgtcctcc
agccatgttcatgcagcaatggaaggaaaggccaacagcagccaccaggctctcctgcag
cacctactgttgaaggagcaaatgcgccagcaaaagcttcttgtggctggtggagttcca
ttacacgctcagtctcctttggcaacaaaagaaagaatttcaccaggcattcgaggtacc
cacaaattgccccgccaccgacccctgaatcgaacccagtctgcacctttgcctcagagc
acgctggctcagctggtcattcagcagcagcaccagcagttcctggagaagcagaaacaa
taccagcagcagatccacatgaacaaactgctatcgaaatctattgaacaactgaagcaa
ccaggcagccaccttgaagaagcagaggaggagcttcagggggaccaatcaatggaagac
agagccacctctcaggacaacagtactaggagcgacagcagtgcttgtgtgggtgacaca
ctgggacaagttggggctgtgaaggtcaaggaggaacccgtggacagcgatgaagatgct
cagatacaggaaatggaatgtggggagcaggctgcttttatgcaacagcctcccttgctg
gagtcctcacacacgcgtgcactctcggtgcaccaggctcggttggctacagttggcgtc
gatggattagagaaacatggactcctctccaggacccattcttctcctgcagcctccgtg
tcacctcacccagcagccgactgtccccgccagcctgcctctgccactggaattgcctat
gaccctctgatgctgaaacaccagtgcatctgtggcaattccaccacccaccctgagcac
gctgggcgaatacagagcatctggtcacggctgcaagaaactgggctgctaaataaatgt
gagcgaattcaaggtcgaaaagccagcctggaggaaatacagcttgttcattctgaacat
cactcactattgtatggcaccagccccctggacggacagaagctggaccccaggacactc
ctaggtgatgattctcgaaaattcttttcctcattaccttgtggtggacttggggtggac
agtgacaccatttggaatgagctgcactcgtccggtgctgcacgcatggctgttggctgt
gtcattgagctggcttccaaagtggcctcaggagagctgaagaatgggtttgctgttgtg
aggcccccaggccatcatgctgaagaatctgcagccatggggttctgcttttttaattca
gttgcaattaccgccaaatacttgagagaccaactaaatataagcaagatattgattgta
gatctggatgttcaccatggaaacggtacacagcaggccttttatgctgaccccagcatc
ctgtacatttcactccatcgctatgatgaagggaactttttccctggcagtggagccccg
aatgaggttggagtaggtctgggagaaggctacaatgtaaacattgcctggacaggtggc
cttgacccccctatgggagatgttgagtaccttgaagcattcaggactgtcgtgatgcct
gtggccagagagtttgatccagacatggtcctggtttcagctggatttgatgctttggaa
ggccatacccctcccctagggggttacaaagtgacagcaaaatgctttggtcatttgaca
aagcaattgatgacattggctaatggacgagtggcattggctcttgaaggaggacatgat
ctgacagccatctgtgatgcatcggaagcctgcataaatgcccttctaggaaatgagcca
ggtcctcttgaggaagatgttctccaccagtccgtgaacacgaatgcagctgcttcttta
cagaagaccattgaaatccaaagtaagtattggaagtcgatcaagatggtggctgttgcc
aggggctgtgctctgcctgcttctcagctgcaagaggagacagagaccgtttccgcacta
gcctccctgacggtagatgtggaacagccatttgctcaggaagatggcagaactgctggt
gagcccatggaagaggagccagccttgtga
DBGET
integrated database retrieval system
