Mastomys coucha (southern multimammate mouse): 116079712
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Entry
116079712 CDS
T07224
Symbol
Smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03082
ATP-dependent chromatin remodeling
mcoc04714
Thermogenesis
mcoc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116079712 (Smarcd1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
116079712 (Smarcd1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
116079712 (Smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116079712 (Smarcd1)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116079712 (Smarcd1)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116079712 (Smarcd1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116079712 (Smarcd1)
PBAF complex
116079712 (Smarcd1)
GBAF(ncBAF) complex
116079712 (Smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
116079712
NCBI-ProteinID:
XP_031211482
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGVAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgcgggagcctcggga
ggagcgggcgtggcggcggctctgggcccgggcggaactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctctccgatgcccggggcggcctatccgaga
ccaggtatgctgccaggtagccgaatgacacctcagggaccttccatgggacctcctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcaacagatccagcaggtccagcagcaggcggtccaaaatcgaaat
cacaatgcaaagaaaaagaagatggcggacaaaatcctacctcaaaggattcgggagttg
gtaccagaatcacaggcctacatggatctcctggcttttgaaaggaaactggaccagaca
attatgaggaagcggctagatatccaggaggccttgaagcgccccatcaagcaaaaacgg
aagctgcgaattttcatttctaacacgttcaatccggccaagtcggatgcagaggatggg
gaagggacggtggcttcctgggagctccgggtggaaggccggctcctggaggactcagcc
ttgtccaaatatgatgccaccaagcaaaagagaaagttctcttccttttttaagtccttg
gtgatcgaactggacaaagacctctatggcccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggatggcttccaggtgaagcgaccaggagatgtgaacgtg
cggtgcactgtcctgctgatgctggattaccagcccccccagtttaaattagaccctcgc
ctggctcggctcttgggcatccatacccagacacgtccagtgatcatccaagcactgtgg
caatatattaaaacacataagctccaggaccctcacgagcgagagtttgttatctgtgac
aagtacctccagcagatctttgaatctcagcggatgaagttctcagagatccctcaacgg
ctccacgccttgcttatgccaccagagcccatcatcattaatcacgtcatcagtgttgac
ccaaatgaccagaaaaagacagcctgctatgacattgacgtggaggtggatgacactttg
aagacccagatgaactctttcctgctgtccactgccagccagcaggagatcgctacttta
gacaacaagatccatgaaacgatagaaactatcaaccagctcaagacgcagagagagttc
atgttgagctttgcccgagaccctcagggtttcatcaatgattggcttcagtcccagtgc
cgggacctcaagacgatgactgatgtggtgggtaatccggaagaggagcgccgtgctgag
ttctacttccagccctgggctcaggaggccgtgtgccgatacttctactccaaggtgcag
cagaggcggcaagagttagagcaagccctgggaatccgaaacacatag
DBGET
integrated database retrieval system
