Mastomys coucha (southern multimammate mouse): 116079731
Help
Entry
116079731 CDS
T07224
Symbol
Cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116079731 (Cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116079731 (Cpsf2)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116079731 (Cpsf2)
U7-dependent histone pre-mRNA processing factors
116079731 (Cpsf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
116079731
NCBI-ProteinID:
XP_031211512
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MFLKGKWHLLDTHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSV
DIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLY
QSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKI
VKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTN
VLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKS
QVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLF
IQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYVEKEKLK
KEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYP
MFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKC
VSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFG
GKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKV
DTGVILEEGELKDDGEDSEMQVDAPSDSSAIAQQKAMKSLFGDDEKELGEESEIIPTLEP
LPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEG
CLCQDFYRIRDLLYEQYAIV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaaaggcaaatggcaccttttagatacccattactggaccagaaagatgaca
tctatcatcaaattaactaccctctctggggtccaagaagagtctgctctttgctatctt
ctccaggttgatgagtttagatttttgttggactgtggctgggatgaacacttctctgtg
gacattattgattccctgaggaagcatgttcaccagatcgatgcggtgcttctgtctcac
cccgacccactccacctcggcgccctcccattcgcggtggggaagctgggtctgaactgt
gccatctatgcaacaattcctgtctataaaatgggccagatgttcatgtacgatctttat
cagtctcgacacaatacagaagatttcaccctctttacattggatgatgtggatgcagcc
tttgataaaatacagcagctaaaattctctcagattgtgaacctgaaaggcaaaggacat
ggtttgtctatcacacccctgccagctggtcatatgataggaggaacaatatggaaaata
gtcaaagatggagaagaagaaattgtttatgccgttgacttcaaccacaagagggagatc
cacttaaatggatgttccctggaaatgctgagcaggccctctctacttatcacagattca
tttaatgctacttacgtgcagcctagaaggaagcagagagacgagcagctcctgacaaac
gtcctggaaactcttcggggtgatgggaatgtgctgatagctgtggacacagcaggaaga
gttctggagcttgctcaacttcttgatcagatttggagaactaaagatgctgggttgggc
gtttactcgctggctcttctgaataacgtcagttataatgtggtggagttttctaagtca
caggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaataaccca
tttcagtttcgccacctctctctgtgccacggtctttctgacttggctcgagttccaagc
cccaaagttgtacttgccagccagcctgacctggagtgtggattctcaagagacctcttt
attcagtggtgtcaggaccctaaaaactcaatcattctaacttataggacaactcctggg
actttagcacgtttcttaattgataatccttctgagaaagttacagaaatagagttgagg
aaacgtgtgaagcttgaagggaaagaacttgaggaatatgtggaaaaagaaaaactaaag
aaagaagctgctaagaaactggagcagtccaaagaggcagacatcgactccagtgacgag
agtgacgtggaggaagacgtcgaccagccgtcggctcacaagacaaagcacgacctgatg
atgaagggggagggcagccgcaaagggagcttcttcaaacaggccaaaaagtcctacccc
atgttccctgccccagaagagagaatcaaatgggacgagtatggagagatcatcaaacca
gaagatttcttagtgccagaacttcaggctactgaagaagaaaaaagcaaattagaatct
ggtttgacaaatggagaggaacccatggaccaggacctgtctgatgtccccaccaagtgt
gtctctgcaacagagtctattgagataaaagccagagttacttacatagactatgaagga
cgctccgacggggactccattaaaaagatcatcaatcagatgaaaccacggcagctgatc
attgtccacggcccaccagaggccagccaggatctggctgagtgctgccgtgcgtttggt
gggaaagatattaaagtgtacatgccaaagctgcacgagacagtcgatgccaccagtgag
actcatatctatcaggtaagattaaaagactcacttgtcagctcccttcagttctgtaaa
gctaaagatgctgagttggcttggatagatggcgtcttagacatgagagtttccaaagtg
gacacgggagttattttagaagaaggagaactcaaggacgatggagaagactctgaaatg
caagtggatgctccttcagattctagtgccatagcccagcagaaggccatgaaaagtctg
tttggagatgatgagaaagagttgggtgaggagagtgagatcatccccacactggagcct
ttgccacctcacgaggttcctggacatcagtcagtttttatgaatgagccaagactgtct
gacttcaagcaagttcttttgcgggaagggattcaagcggaatttgtagggggcgtactt
gtctgcaacaaccaagtagcagttcgcagaacagaaactggacgcatcgggttagaaggc
tgcctttgtcaagacttttataggatacgagaccttttatatgaacagtatgccattgta
taa
DBGET
integrated database retrieval system
