Mastomys coucha (southern multimammate mouse): 116079743
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Entry
116079743 CDS
T07224
Symbol
Taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116079743 (Taf1b)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116079743 (Taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
116079743
NCBI-ProteinID:
XP_031211560
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MNGPYASFAYSRTPSTQKAFTDRCSQCAAVSWGLTDEGKYYCTSCHNVTDRSEEVVSTAV
IPNTKINSISRGLRQRSKHEKGWDWYVCEGFQCILYHQAEALETLGVSPELKNEVLHSFW
KRYLQKSKQAYCKNPVRTSGRKAKVLEDNLQSSDWASDLELLSDTTCPLESGAEFQSDPQ
TPKPFPVTKGSPKSAASVCSGSVDGVEYSERKEKGLVKMTVPRTLALCYLSLLWQRETIT
LSDLLRFVEEDRIPYINAFKLFPEEMKVYGRDKGIFVVESWPDYEDIYKNMIEVAIFLDL
PRFPDITEDCYLHPNTLCMKYLLEVNLPDEMNTLTCQVVKLTGIGEVDFLTFDPIAKMKR
TVKYDVQAVAVIVVVLKLLFLLDDKLEWSYSDLAEAYNEEHREDTPQFDFRKWYQVMKKT
FDEKRRKWEEARARYAWKTKRPLYRSHIDKSVAYKRREMVENLQRQFSALVGSAPVVEKQ
APSSFQFNWTEEGTDSPCFHGHSLQTLLITKGQSLITKNPLYWLSTQKFCKSYCKHVTTY
EESNFSLSYQFILNIFSFLLRIKASALHEEVSLLEKKLFEKKYNESRKSLRSKKVRRQ
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaccatatgcttcttttgcttacagtagaaccccaagcacccagaaagcattc
acagaccgctgttctcagtgtgctgctgtctcctggggccttaccgatgaaggcaaatat
tactgtacctcctgccacaacgtcacagatcgatctgaggaagtggtgagcactgcagtt
atccctaacacgaagatcaactccatcagcaggggcctgagacagagaagcaagcatgag
aaaggctgggattggtatgtgtgtgaaggtttccagtgcatactttatcaccaagcagaa
gccctggagaccctcggagtaagcccagaactaaagaatgaagtcttacacagcttttgg
aagcgctaccttcagaagagcaagcaggcctattgtaaaaatccagttcgtacaagtgga
aggaaagccaaggtattagaagacaatctgcagtcctctgactgggccagtgatcttgag
ctgctaagtgataccacatgtccccttgaaagtggagcagagttccagtctgaccctcag
actccaaagcctttccctgtcaccaaaggatcaccaaagtcagcagcatctgtctgctct
ggatctgttgatggagtggagtactcagagcggaaggagaaggggctcgtgaagatgacc
gtgcccaggacacttgctctctgctatctgtccttgctctggcagagagaaacaattaca
ctttcagaccttttgaggtttgttgaagaggaccgtattccgtacataaatgctttcaag
ctttttccagaagagatgaaagtatatggtcgtgacaaaggcatctttgttgtagagtct
tggcctgactatgaagacatctataaaaacatgattgaagtcgccatatttttagatttg
cctcgtttcccagacataactgaagactgctacctccatcccaacaccttgtgtatgaaa
tacttactggaggtcaatctccctgatgaaatgaacactttaacctgtcaagtagtaaag
ttgactggaattggagaagtggattttctgacgtttgatccgatagctaaaatgaaaagg
acagttaaatatgatgtgcaggctgtagctgtcattgtggttgtgttgaagctgctgttt
ttgctggatgacaagctggaatggtcctactcagatcttgctgaagcatataacgaagaa
cacagagaagacacaccgcagtttgatttcagaaaatggtaccaagttatgaagaaaact
tttgatgagaaaagacgaaaatgggaagaagcaagggccaggtatgcttggaaaaccaaa
aggccactctaccgttcacacattgataagtcagtcgcatataagagaagagaaatggta
gagaatcttcaaagacaatttagtgccctggttggttcagcacctgtggttgaaaagcag
gccccttcaagttttcagttcaactggactgaagaaggcactgatagtccttgtttccat
ggtcatagcctccagacactcctgataacgaaaggccagtccttgataaccaagaacccc
ctgtattggctcagtacccagaagttctgcaaaagctactgtaaacatgtaacaacttat
gaagaatcaaatttttctttgagttaccagtttatactaaacatcttctccttcttactg
agaataaaggcctctgctctccatgaagaagtgagcttacttgaaaagaaactttttgaa
aaaaaatacaatgaatcaagaaagagcttaagatccaagaaagtaagaagacaatga
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