Mastomys coucha (southern multimammate mouse): 116079775
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Entry
116079775 CDS
T07224
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc01524
Platinum drug resistance
mcoc03430
Mismatch repair
mcoc05200
Pathways in cancer
mcoc05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
116079775 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116079775 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
116079775 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
116079775 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116079775 (Msh2)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
116079775 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
116079775
NCBI-ProteinID:
XP_031211663
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MAVQPKETLQLEGAAEVGFVRFFEGMPEKPSTTVRLFDRGDFYTTHGEDALLAAREVFKT
QGVIKYMGPAGTKTLPSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMAASVGIMGIKMSMVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGDQINSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYM
KLDTAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERL
NLVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPSVIQA
LEKYQGRHQALLLAAFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
HLDAVVSFAHVSNSAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGTPLRCDEAEPAAKRRCLEREQGEKIILEFLSKVKQVPFTDMS
EESVSVKLKQLKAEVVAKNNSFVNEIISRIKAP
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcctaaggagacgctgcagttggaaggcgcggccgaggtgggcttcgtg
cgcttctttgagggcatgccggagaagccgagcaccaccgtgcgcctcttcgaccgcggc
gacttttacaccacgcacggcgaggacgcgctgctggccgctcgcgaggtgttcaagact
cagggcgtgatcaagtacatggggccggcagggacaaagacactgccgagtgttgtgctt
agcaagatgaattttgagtcttttgtgaaagatcttcttctggttcgtcagtatcgagtt
gaagtttataagaataaagctggaaataaggcgtctaaggagaacgattggtatttagca
tttaaggcttctcccggcaatctttctcagtttgaagacatcctgtttggtaacaatgac
atggcagcttctgttggcattatgggtattaaaatgtccatggttgatggtcaaagacag
gttggagttgggtatgtagattccatccagagaaagctaggcttgtgtgagttccctgat
aatgatcagttctccaatctcgaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactactggagacatggggaaactgaggcaggttatccagagagga
gggattcttatcacagaaagaaagagagccgacttttccactaaagacatttatcaggat
ctcaaccggttattgaaaggcaaaaaaggagaccagataaatagtgctgtcttaccagag
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaattttggacagtttgagctggctacttttgacttcagccagtacatg
aagttggacacagcagctgttagagccctcaaccttttccagggttctgtggaagacacc
actggctctcagtctctggctgcattattgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggatcaaacagccgctcatggatagaaacaggatagaagagaggtta
aatttagtggaagcttttgtggaagattcagagttgaggcagagtttacaggaggattta
cttcgccgatttccagatcttaaccggcttgccaagaaatttcagagacaagcagcgaat
ttacaagattgttatcgactgtaccagggtgtgaaccagcttcccagcgtcatccaggct
ctggagaaataccaaggaagacaccaggcgttgttgttggcagcttttgtgactcctctc
attgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacgactttagatatg
gatcaggtagaaaaccacgagttcctcgtcaaaccttcatttgatcctaacctgagtgaa
ctaagagaagtcatggatggactggagaagaagatgcagtccaccttaataagtgcagcc
cgggggctcggattggaccctggcaaacagattaaattggactccagtgcacagtttgga
tattattttcgtgtaacctgcaaggaagagaaagtccttcgcaacaacaagaacttcagc
acagtagacatccagaagaacggcgttaaattcaccaacagtgaattgtcctctttaaat
gaagaatatactaagaacaaaggcgagtatgaggaggcccaggatgccattgttaaagaa
attgtcaatatctcctcaggctatgtagagccaatgcagacactcaatgatgtgctagct
cacttagatgccgtcgtcagctttgctcacgtgtcaaactcagctcctgttccttatgta
cgaccggtcatcttggagaaaggaaaaggaagaattatattgaaagcctccaggcatgct
tgtgttgaagttcaagatgaagttgcatttattccaaatgatgtgcattttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatatatccgt
cagactggggtgattgtactcatggcccagattgggtgttttgtgccgtgtgagtcagca
gaagtgtccattgtggactgcatcttggctcgagttggggctggcgacagtcagctgaaa
ggcgtgtccacattcatggctgagatgttggagactgcgtctatcctcaggtcagcaacc
aaagattccttaataatcattgatgaactgggaagaggaacctctacctacgatggattt
gggctagcatgggctatatcagattacattgcaacaaagatcggtgccttttgcatgttt
gccacccattttcatgaacttactgctttggccagtcaaataccaactgttaataattta
catgtcacagcgctcactactgaagagaccctaactatgctttaccaagtgaaaaaaggt
gtctgtgatcaaagtttcgggattcatgtggctgagctcgctaatttccctaggcatgtg
atagagtgcgccaagcagaaagctctggagcttgaggagtttcagaacattggaacccca
ctgcgatgtgatgaagctgagccagctgcaaagaggcgctgcctagaaagagagcaaggt
gagaagattattttggagttcctgtccaaggtcaagcaagtgcccttcactgacatgtcg
gaagagagtgtctcagtgaagctgaagcaactgaaggccgaggtggttgcaaagaataac
agttttgtcaatgaaatcatctcgaggataaaggctccgtga
DBGET
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