KEGG   Mastomys coucha (southern multimammate mouse): 116079775
Entry
116079775         CDS       T07224                                 
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc01524  Platinum drug resistance
mcoc03430  Mismatch repair
mcoc05200  Pathways in cancer
mcoc05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    116079775 (Msh2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    116079775 (Msh2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    116079775 (Msh2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    116079775 (Msh2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mcoc03400]
    116079775 (Msh2)
DNA repair and recombination proteins [BR:mcoc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     116079775 (Msh2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_I MutS_IV AAA_27
Other DBs
NCBI-GeneID: 116079775
NCBI-ProteinID: XP_031211663
LinkDB
Position
Unknown
AA seq 933 aa
MAVQPKETLQLEGAAEVGFVRFFEGMPEKPSTTVRLFDRGDFYTTHGEDALLAAREVFKT
QGVIKYMGPAGTKTLPSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMAASVGIMGIKMSMVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETTGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGDQINSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELATFDFSQYM
KLDTAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERL
NLVEAFVEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPSVIQA
LEKYQGRHQALLLAAFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
HLDAVVSFAHVSNSAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGTPLRCDEAEPAAKRRCLEREQGEKIILEFLSKVKQVPFTDMS
EESVSVKLKQLKAEVVAKNNSFVNEIISRIKAP
NT seq 2802 nt   +upstreamnt  +downstreamnt
atggcggtgcagcctaaggagacgctgcagttggaaggcgcggccgaggtgggcttcgtg
cgcttctttgagggcatgccggagaagccgagcaccaccgtgcgcctcttcgaccgcggc
gacttttacaccacgcacggcgaggacgcgctgctggccgctcgcgaggtgttcaagact
cagggcgtgatcaagtacatggggccggcagggacaaagacactgccgagtgttgtgctt
agcaagatgaattttgagtcttttgtgaaagatcttcttctggttcgtcagtatcgagtt
gaagtttataagaataaagctggaaataaggcgtctaaggagaacgattggtatttagca
tttaaggcttctcccggcaatctttctcagtttgaagacatcctgtttggtaacaatgac
atggcagcttctgttggcattatgggtattaaaatgtccatggttgatggtcaaagacag
gttggagttgggtatgtagattccatccagagaaagctaggcttgtgtgagttccctgat
aatgatcagttctccaatctcgaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactactggagacatggggaaactgaggcaggttatccagagagga
gggattcttatcacagaaagaaagagagccgacttttccactaaagacatttatcaggat
ctcaaccggttattgaaaggcaaaaaaggagaccagataaatagtgctgtcttaccagag
atggagaatcaggttgcagtttcatcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaattttggacagtttgagctggctacttttgacttcagccagtacatg
aagttggacacagcagctgttagagccctcaaccttttccagggttctgtggaagacacc
actggctctcagtctctggctgcattattgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggatcaaacagccgctcatggatagaaacaggatagaagagaggtta
aatttagtggaagcttttgtggaagattcagagttgaggcagagtttacaggaggattta
cttcgccgatttccagatcttaaccggcttgccaagaaatttcagagacaagcagcgaat
ttacaagattgttatcgactgtaccagggtgtgaaccagcttcccagcgtcatccaggct
ctggagaaataccaaggaagacaccaggcgttgttgttggcagcttttgtgactcctctc
attgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacgactttagatatg
gatcaggtagaaaaccacgagttcctcgtcaaaccttcatttgatcctaacctgagtgaa
ctaagagaagtcatggatggactggagaagaagatgcagtccaccttaataagtgcagcc
cgggggctcggattggaccctggcaaacagattaaattggactccagtgcacagtttgga
tattattttcgtgtaacctgcaaggaagagaaagtccttcgcaacaacaagaacttcagc
acagtagacatccagaagaacggcgttaaattcaccaacagtgaattgtcctctttaaat
gaagaatatactaagaacaaaggcgagtatgaggaggcccaggatgccattgttaaagaa
attgtcaatatctcctcaggctatgtagagccaatgcagacactcaatgatgtgctagct
cacttagatgccgtcgtcagctttgctcacgtgtcaaactcagctcctgttccttatgta
cgaccggtcatcttggagaaaggaaaaggaagaattatattgaaagcctccaggcatgct
tgtgttgaagttcaagatgaagttgcatttattccaaatgatgtgcattttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatatatccgt
cagactggggtgattgtactcatggcccagattgggtgttttgtgccgtgtgagtcagca
gaagtgtccattgtggactgcatcttggctcgagttggggctggcgacagtcagctgaaa
ggcgtgtccacattcatggctgagatgttggagactgcgtctatcctcaggtcagcaacc
aaagattccttaataatcattgatgaactgggaagaggaacctctacctacgatggattt
gggctagcatgggctatatcagattacattgcaacaaagatcggtgccttttgcatgttt
gccacccattttcatgaacttactgctttggccagtcaaataccaactgttaataattta
catgtcacagcgctcactactgaagagaccctaactatgctttaccaagtgaaaaaaggt
gtctgtgatcaaagtttcgggattcatgtggctgagctcgctaatttccctaggcatgtg
atagagtgcgccaagcagaaagctctggagcttgaggagtttcagaacattggaacccca
ctgcgatgtgatgaagctgagccagctgcaaagaggcgctgcctagaaagagagcaaggt
gagaagattattttggagttcctgtccaaggtcaagcaagtgcccttcactgacatgtcg
gaagagagtgtctcagtgaagctgaagcaactgaaggccgaggtggttgcaaagaataac
agttttgtcaatgaaatcatctcgaggataaaggctccgtga

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