Mastomys coucha (southern multimammate mouse): 116080031
Help
Entry
116080031 CDS
T07224
Symbol
Ttc6
Name
(RefSeq) tetratricopeptide repeat protein 6 isoform X1
KO
K24929
tetratricopeptide repeat protein 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
116080031 (Ttc6)
Domain-containing proteins not elsewhere classified [BR:
mcoc04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
116080031 (Ttc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_17
TPR_16
TPR_8
TPR_9
TPR_14
TPR_12
TPR_19
ARM_TT21_N
TPR_CcmH_CycH
TPR_6
ANAPC3
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
116080031
NCBI-ProteinID:
XP_031212106
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MSTIPKHFGLTARDESYMFKELEKIRRKTKKDYEQLRQRLAARPALNVGSQEDDLDQEEE
ERPGTAGHSREKKGHVSWAAKPPSGAQRGELPAEADLQGAPHSAQGSPVKPQAFRPRDFY
MRSSAFRRHPPYKTAPAIAPQVGTTRPVILLRPRSRRKRLRGKAREAPVTKRVSKSPAHG
SPMIDLASTRYRLASSLSSLSSEAEESARLRRLRFRTHFQREIMRWHHRPLSRSGREGSS
TSQGTGPLQGARNFPMNIEEIIASLQSEAQQASDQTIKELIQSILGQNYDIAMEDISLME
QMYLRPSQAHLEVPMVVEEKKYPMIKERLIVPSIYEEIPETVSSILVEQEEAIEWVSIEE
DFPAFKSQEMLDIEPPEDSSNLPDSGDLPISDVKPTRRPTLKVEPKGFMQIRGKEVKPIY
KSRPTKPPKQRISVRCEEDKKRIKKIPQAPPLPHLHDLCITVPTMELPVGLHLASRVYHT
SDRRGHKAVLGLLGSSLLGDHCIDEQRERLIYGVPVMSEKQKYTGVTSVPAKTFPESEQT
NRWKANKANLQLSGEEVSAYPGTSKMFWNFSAPKFAIPESTMRETLYPEYESVQTSRLLI
EKLSETKESEIILDIYTKRSLKTLIIKKSASYDNIKKHSSPPYTQLKRSKSTAELRKRTP
LPFVMKDDIDTNLKLLMYQKTQEMERQRVKQRALLDFSLKSSLEILNDDSDSTKCLSFSL
VEASRKAGISYIVFPSKKKKLLKKGSKFQKTEQVYQQLSKPPKKLERSVSHGVLPGEKKY
FLKVPLYERQIRCPSVPSYLNFDQFSQSRGGIPENVDPQKWVLELFAKDRPQKAQTPVVP
SVENDLPEPVIELSKLELSDHIKSNLPPEVIKYYESEVEKLTQEIKNEKRNSAFAYCRRG
AIYRKLGKLQSAMNDLQEAIFQEPLFLNAYWHRHFIYLFQDKINDALDDLNFINKHNKNN
AEAYLSKAEIFREKNDITLAILNYSQAIKCRPKDANLYFKRGEMYEKTNKVLAIDDYSKC
IFYNPKRSDALWKRGMFYFENENWIGAVYDFTSLLKLDPYNSYARTNRGRAYFKRNLYKQ
ATQDFSVAIHLDPNNWLALYYRACLFRKTSPYRALQDYSMSVLINDGYDNLNCFLHRGIL
YTQLKFWMLAICDFETVVSLERTATLAYINIGLIYLQYLDNYTDALWWFTEAIRVDPLSI
QSYIYRAETYSKLHKLKRAVTELSRAIHLQPDAIHLYIIRGQYLLMMKNYELGKLTIYQV
AEMNKGIIELTPIQEALIYSFCENHDKAIHVLEGVIASKPDISTYALLAKAQMKAKRIKE
SVRLFKKALELYTFSDKGPDATSVSAECLYNLGLCYMEEGNFQMAFESFTKAVKANPELA
EAYYHRGLCKVKLNKQNSILDFNRALILNPKHYQAYLSRVAYYGLKGRYSKAILNCNEAI
KLYPESVRAYICRGVLKYYNRNYKLAITDLSIAVNMDKNSYTAFYNRALCYTKIGEHQMA
LRDYGVVLLLDAGENIALNTFINRGLIYTELEKYGFALEDFKQAALMRETSVSLFQATAM
CHHRIKEFEGAVEFFTRAIKINPHYVDAYIGRGNSYMEYGQEEAMIQAQKDFLKALHIDP
SCLKARISLGYNLQGQGKFQKAWTHFTIGIEASPKSYLAYEGRAVVCLQMSNYFAAMQDI
NCAIKINSTAEFLTNRGVIHEFMGQQHNAMVDYQAAISLNPSYSLAYFNAGNIYLRHRQF
SQASEYYSTALKFNPENEYALMNRAVTNSVLKKYEEAEKDFSYAMELCPHWAALYFNRAS
FNFYLKKYKLAEEDLDIALSLKPDEAIMYNLRAQVRGKIGLMMEAMSDYNQALDLEECST
TM
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatcccaaagcatttcggactgacagccagagatgaatcgtacatgttcaaa
gagcttgagaagattcgccggaagaccaagaaggattatgagcaactcaggcagaggctg
gccgctaggccggctttgaatgtaggttctcaggaggatgatctggaccaggaggaggaa
gaacgcccgggcacagcgggccacagtcgggagaagaaggggcacgtgtcctgggcggcc
aagccaccgtctggagcgcagaggggggagctccccgccgaggccgacctgcagggggcg
ccgcacagcgcgcaaggcagcccggtgaagccccaggcgttccgcccgcgggacttctac
atgcggagctcggcgttccggcggcatccgccctacaagacggcaccggccatcgccccg
caggttggcaccacccgccccgtgatcctgctgcggccgcgctcgcgccggaagaggctg
cgcgggaaggcccgggaggcgccggtgaccaagcgcgtgtccaagagccccgcgcacgga
tcgcccatgatcgacttagcctcgacccggtacaggctcgccagctccctgtccagcctg
agcagcgaagccgaggaaagcgcgcgattgcgcaggctgcggtttcgcacccacttccag
cgcgagatcatgcgctggcaccacaggcccttgtccagatccgggcgcgaggggagctcc
acaagccagggaaccggacctctgcagggggcacgcaactttcccatgaacatagaggag
atcatcgcctccctgcagtccgaagcccagcaggcctcagaccagaccatcaaggagctc
atacagagcatcctgggccagaactacgacatcgcaatggaagatatttctttgatggaa
caaatgtacctcagaccatctcaggcacatcttgaagtacccatggtggtggaagagaaa
aagtacccaatgattaaggaacggctaattgtgccaagcatttatgaggaaattcctgag
actgtgtcaagcatcttggtggaacaggaggaagctatagaatgggtatccatagaggaa
gatttccccgcttttaaatctcaagaaatgttagacattgaaccacctgaggactccagt
aaccttccagatagtggtgatcttcccataagtgatgtaaaaccaaccaggcggccaact
ttaaaggtagaacctaaaggattcatgcaaatcagaggaaaagaagttaagccaatatat
aaaagtagaccaactaagccaccaaaacaaagaatatctgtaagatgtgaggaggataaa
aaaagaattaaaaaaatcccacaggctcctccccttcctcatcttcatgacctgtgcatc
acagtcccaaccatggagttgcctgtgggtctgcacctggcttcccgagtgtaccacact
tctgacaggagaggtcacaaggctgtgctcggactattggggtcatctcttttaggtgac
cactgtattgatgaacagagagaaagactgatatatggtgttcctgttatgagtgaaaag
cagaaatatactggtgttacttcagtaccagcaaagacgttccctgaatcagaacagaca
aatcggtggaaagccaacaaagcaaatcttcagctctcaggagaagaagtgtctgcatat
cctggaacttcaaagatgttttggaatttttctgcacccaaatttgctattccagaatca
actatgagagaaactttatatccagaatatgagagtgttcagacaagcagactcttaatt
gagaaattatctgaaaccaaggagagtgagattattttagatatctacaccaaaagaagc
cttaagactttaataataaaaaagtctgcatcgtatgacaatatcaaaaaacattccagt
ccaccatatacacaattaaagagatcaaagtctacagctgagttgaggaaaaggacccca
ctgccatttgtaatgaaggatgacatagacaccaacttgaaactgttgatgtaccagaag
acgcaggagatggagcgccagcgtgtcaagcaaagggcattgcttgacttctccctaaaa
agcagcctggaaatcttaaatgatgattcagatagcaccaaatgcctgtctttttctctc
gttgaagcatcaagaaaagctggaattagttacattgtatttcctagtaaaaagaagaaa
ctactgaagaaagggtctaagttccagaagactgagcaagtgtaccaacagctctccaag
cctccgaaaaaattagaaagatcagtatctcatggagtacttcctggagagaaaaagtat
ttccttaaagttccattatacgagcgtcaaataaggtgccccagtgtaccctcatattta
aattttgatcagttttctcaaagcagaggaggaattccagagaatgttgatcctcagaag
tgggttcttgagctttttgctaaagacagacctcagaaagcacagactccagttgttcca
tctgttgaaaatgatcttccagagccagtaatagagctctccaaactggagttaagtgat
catataaagagtaaccttccaccagaggtcattaagtattatgaatctgaagtggagaag
ttgactcaagaaataaaaaatgagaaaagaaattcagcatttgcatattgtaggcgtgga
gctatttatcgaaaactgggaaagttgcaaagtgccatgaatgacctacaggaagccata
ttccaggagccattgtttctaaatgcctattggcacagacatttcatttatcttttccaa
gacaaaattaatgatgctttggatgacttgaatttcataaataagcacaataaaaacaat
gcagaggcgtacttgtcaaaggcagagattttcagagagaagaatgacattacattggca
attctgaattacagtcaggccattaagtgcaggcccaaagatgctaacctctatttcaaa
agaggggagatgtatgagaagacaaacaaagtgctggccattgatgactactcaaaatgt
attttttataatcccaaaagatcagatgcattatggaaacgtgggatgttttactttgaa
aatgaaaactggattggagccgtatatgattttacatctctgttaaaacttgacccctat
aattcttatgcaaggacaaaccgggggagagcatattttaaaaggaatttatataaacaa
gcaacccaagacttttctgttgccatccacttagaccccaacaactggctagcactgtac
taccgagcctgcttatttagaaagaccagtccttacagagcactgcaggactacagcatg
tcagttcttataaatgatggctatgataaccttaattgttttctacatcggggcatactc
tatacccaactaaaattttggatgctggcaatttgtgattttgaaactgttgtttctctc
gaaagaactgctactttggcttatattaatattggcctcatatatctacaatacttggat
aattatactgacgccctttggtggtttactgaggcaattagagttgatcctttaagtatc
caaagctatatttatagagcagaaacctattctaagctgcacaaactgaagagggcagta
actgaattaagtcgtgccatccatctccagcctgatgcaatccacctatatataataaga
ggacagtatcttcttatgatgaagaattatgaacttggaaagctcactatttatcaagta
gcagaaatgaacaaaggtatcattgagctgaccccgatacaggaagcgctcatttactca
ttttgtgaaaaccatgacaaggccattcatgtcttggaaggggtcatagccagtaaacca
gacatctccacttatgcactcttggcaaaagcccaaatgaaggccaagagaatcaaggaa
tctgtgagactatttaagaaggcattggaactgtacacattttctgacaaaggaccagat
gccactagtgtttcagcagaatgtctgtataacctgggtctttgctacatggaggaaggc
aattttcaaatggcttttgaatcttttacaaaagctgtgaaagcaaatcctgaacttgca
gaagcctattatcatcggggactttgcaaagtaaaactcaacaagcaaaactcaattctg
gactttaatcgggcacttatcctaaatcccaaacattaccaggcatatttaagccgagta
gcttattatggtttaaagggcagatactccaaagccatcctgaactgtaatgaagccatc
aaactttaccctgagagtgtgcgtgcgtacatctgcagaggagttctgaaatactacaac
agaaattacaagctagctattacagatttatctatagctgtcaacatggacaagaacagt
tacacagcattttataacagagccctgtgttacaccaagataggggaacatcagatggct
ttaagagattatggagttgtgctgcttcttgatgctggagaaaacatagcattaaatacc
ttcattaaccgtggactcatctatactgaactagagaagtatggctttgcacttgaggat
tttaaacaagctgcactgatgagggagactagtgtgagcctttttcaagctactgccatg
tgccaccacagaattaaagagtttgaaggagctgttgaattctttaccagggctattaaa
attaacccacattatgtggatgcttatattggacgggggaattcttacatggagtatgga
caggaagaagctatgatacaggcccagaaggactttctgaaagcgcttcatattgaccca
tcatgtctaaaagccagaattagtctaggctacaatttgcagggccaaggaaaattccag
aaggcttggacacactttactattggtatagaagctagtccaaagagctatctagcctat
gaaggacgagctgtggtctgtcttcaaatgagtaattactttgctgcgatgcaggatatc
aattgtgccataaagatcaattcaacagcagaattcctaacaaaccgtggtgtgattcat
gagtttatgggccaacaacataacgcaatggtagactatcaagcagcaatttctctgaac
cccagttactcgcttgcttactttaacgcgggaaacatctaccttcgccaccggcagttt
tctcaggccagtgagtactactcaacagccttgaagtttaatccagaaaacgagtatgct
ctcatgaatcgagctgttacaaactcagtgttaaagaaatatgaagaagcagaaaaagat
ttttcatacgcaatggaactctgtccccactgggctgcactgtatttcaacagagcaagt
ttcaatttctacttaaagaagtataagcttgccgaagaggaccttgacatagccctgtct
ttgaagcctgatgaagctataatgtataatctcagagcacaagtccgtggcaaaatagga
ctgatgatggaagctatgagtgactacaaccaagcccttgaccttgaagaatgctccaca
actatgtga
DBGET
integrated database retrieval system
